RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 SMARCA5O60264 1052 aaPredicted RBP14.3□□□□□ -0.12
LTBR-203ENST00000441074 OSBPL3Q9H4L5 887 aa14.3□□□□□ -0.12
LTBR-203ENST00000441074 NUTM2BA6NNL0 878 aaPredicted RBP14.3□□□□□ -0.12
LTBR-203ENST00000441074 GNAT3A8MTJ3 354 aa14.3□□□□□ -0.12
LTBR-203ENST00000441074 NUTM2EB1AL46 878 aaPredicted RBP14.3□□□□□ -0.12
LTBR-203ENST00000441074 HMMRO75330 724 aa14.3□□□□□ -0.12
LTBR-203ENST00000441074 ANAPC15P60006 121 aa14.3□□□□□ -0.12
LTBR-203ENST00000441074 NUTM2AQ8IVF1 878 aaPredicted RBP14.3□□□□□ -0.12
LTBR-203ENST00000441074 TSPYL4Q9UJ04 414 aa14.3□□□□□ -0.12
LTBR-203ENST00000441074 CRB1P82279 1406 aa14.29□□□□□ -0.12
LTBR-203ENST00000441074 FAM177BA6PVY3 158 aa14.29□□□□□ -0.12
LTBR-203ENST00000441074 KDM4AO75164 1064 aa14.29□□□□□ -0.12
LTBR-203ENST00000441074 TPM3P06753 285 aa14.29□□□□□ -0.12
LTBR-203ENST00000441074 MCCP23508 829 aa14.29□□□□□ -0.12
LTBR-203ENST00000441074 CHAF1AQ13111 956 aaPredicted RBP14.29□□□□□ -0.12
LTBR-203ENST00000441074 MPRIPQ6WCQ1 1025 aa14.29□□□□□ -0.12
LTBR-203ENST00000441074 NLRP2Q9NX02 1062 aa14.29□□□□□ -0.12
LTBR-203ENST00000441074 WDR33Q9C0J8 1336 aaKnown RBP14.29□□□□□ -0.12
LTBR-203ENST00000441074 ALS2Q96Q42 1657 aa14.29□□□□□ -0.12
LTBR-203ENST00000441074 MX1P20591 662 aa14.29□□□□□ -0.12
LTBR-203ENST00000441074 KIAA1524Q8TCG1 905 aa14.29□□□□□ -0.12
LTBR-203ENST00000441074 CTIFO43310 598 aaKnown RBP14.28□□□□□ -0.12
LTBR-203ENST00000441074 FEZ1Q99689 392 aa14.28□□□□□ -0.12
LTBR-203ENST00000441074 MED1Q15648 1581 aaPredicted RBP14.28□□□□□ -0.12
LTBR-203ENST00000441074 TAF3Q5VWG9 929 aa14.27□□□□□ -0.12
LTBR-203ENST00000441074 IL17RAQ96F46 866 aa14.27□□□□□ -0.12
LTBR-203ENST00000441074 GDPD2Q9HCC8 539 aa14.27□□□□□ -0.12
LTBR-203ENST00000441074 SPDYE4A6NLX3 237 aa14.27□□□□□ -0.13
LTBR-203ENST00000441074 RIOK3O14730 519 aaKnown RBP14.27□□□□□ -0.13
LTBR-203ENST00000441074 HCLS1P14317 486 aaPredicted RBP14.27□□□□□ -0.13
LTBR-203ENST00000441074 LTN1O94822 1766 aa14.26□□□□□ -0.13
LTBR-203ENST00000441074 CSB-PGBD3P0DP91 1061 aa14.26□□□□□ -0.13
LTBR-203ENST00000441074 ERBB3P21860 1342 aa14.26□□□□□ -0.13
LTBR-203ENST00000441074 PDE1AP54750 535 aa14.26□□□□□ -0.13
LTBR-203ENST00000441074 ESYT1Q9BSJ8 1104 aa14.26□□□□□ -0.13
LTBR-203ENST00000441074 ZNF530Q6P9A1 599 aaPredicted RBP14.26□□□□□ -0.13
LTBR-203ENST00000441074 APBB1O00213 710 aa14.25□□□□□ -0.13
LTBR-203ENST00000441074 KCNQ3O43525 872 aa14.25□□□□□ -0.13
LTBR-203ENST00000441074 ADAMTS2O95450 1211 aa14.25□□□□□ -0.13
LTBR-203ENST00000441074 RPAP1Q9BWH6 1393 aaPredicted RBP14.25□□□□□ -0.13
LTBR-203ENST00000441074 U2AF2P26368 475 aaKnown RBP eCLIP14.25□□□□□ -0.13
LTBR-203ENST00000441074 OGFRQ9NZT2 677 aa14.25□□□□□ -0.13
LTBR-203ENST00000441074 MAP3K5Q99683 1374 aa14.24□□□□□ -0.13
LTBR-203ENST00000441074 CCT4P50991 539 aaKnown RBP14.24□□□□□ -0.13
LTBR-203ENST00000441074 UBE2HP62256 183 aa14.24□□□□□ -0.13
LTBR-203ENST00000441074 FOXD4L6Q3SYB3 417 aaPredicted RBP14.24□□□□□ -0.13
LTBR-203ENST00000441074 FOXD4L3Q6VB84 417 aaPredicted RBP14.24□□□□□ -0.13
LTBR-203ENST00000441074 KCNF1Q9H3M0 494 aa14.24□□□□□ -0.13
LTBR-203ENST00000441074 PALD1Q9ULE6 856 aa14.24□□□□□ -0.13
LTBR-203ENST00000441074 SLIT3O75094 1523 aa14.24□□□□□ -0.13
LTBR-203ENST00000441074 SLC4A2P04920 1241 aa14.24□□□□□ -0.13
LTBR-203ENST00000441074 SYCP1Q15431 976 aa14.24□□□□□ -0.13
LTBR-203ENST00000441074 MEIS3Q99687 375 aa14.24□□□□□ -0.13
LTBR-203ENST00000441074 FUCA2Q9BTY2 467 aa14.24□□□□□ -0.13
LTBR-203ENST00000441074 SRCIN1Q9C0H9 1055 aa14.24□□□□□ -0.13
LTBR-203ENST00000441074 PYCARDQ9ULZ3 195 aa14.24□□□□□ -0.13
LTBR-203ENST00000441074 SPATA31A6Q5VVP1 1343 aa14.23□□□□□ -0.13
LTBR-203ENST00000441074 G2E3Q7L622 706 aa14.23□□□□□ -0.13
LTBR-203ENST00000441074 GOLGA6L6A8MZA4 724 aa14.23□□□□□ -0.13
LTBR-203ENST00000441074 NOL8Q76FK4 1167 aaKnown RBP14.23□□□□□ -0.13
LTBR-203ENST00000441074 COL22A1Q8NFW1 1626 aaPredicted RBP14.22□□□□□ -0.13
LTBR-203ENST00000441074 PRDM11Q9NQV5 511 aa14.21□□□□□ -0.13
LTBR-203ENST00000441074 CNPY2Q9Y2B0 182 aa14.21□□□□□ -0.13
LTBR-203ENST00000441074 USP54Q70EL1 1684 aa14.21□□□□□ -0.13
LTBR-203ENST00000441074 F6X3S4 739 aa14.21□□□□□ -0.13
LTBR-203ENST00000441074 EPB41L2O43491 1005 aaKnown RBP14.21□□□□□ -0.13
LTBR-203ENST00000441074 GABPB1Q06547 395 aaPredicted RBP14.21□□□□□ -0.13
LTBR-203ENST00000441074 TAF7Q15545 349 aaPredicted RBP14.21□□□□□ -0.13
LTBR-203ENST00000441074 RGPD2P0DJD1 1756 aa14.21□□□□□ -0.13
LTBR-203ENST00000441074 AP5Z1O43299 807 aa14.2□□□□□ -0.14
LTBR-203ENST00000441074 ZSCAN22P10073 491 aaPredicted RBP14.2□□□□□ -0.14
LTBR-203ENST00000441074 CHMLP26374 656 aa14.2□□□□□ -0.14
LTBR-203ENST00000441074 ANO2Q9NQ90 1003 aa14.2□□□□□ -0.14
LTBR-203ENST00000441074 SALL3Q9BXA9 1300 aa14.2□□□□□ -0.14
LTBR-203ENST00000441074 TUBGCP6Q96RT7 1819 aa14.2□□□□□ -0.14
LTBR-203ENST00000441074 PLEKHO1Q53GL0 409 aaPredicted RBP14.2□□□□□ -0.14
LTBR-203ENST00000441074 MEX3CQ5U5Q3 659 aaKnown RBP14.2□□□□□ -0.14
LTBR-203ENST00000441074 STRN4Q9NRL3 753 aa14.2□□□□□ -0.14
LTBR-203ENST00000441074 GNAI2P04899 355 aa14.19□□□□□ -0.14
LTBR-203ENST00000441074 PLCB2Q00722 1185 aa14.19□□□□□ -0.14
LTBR-203ENST00000441074 NCBP1Q09161 790 aaKnown RBP14.19□□□□□ -0.14
LTBR-203ENST00000441074 BBXQ8WY36 941 aaPredicted RBP14.19□□□□□ -0.14
LTBR-203ENST00000441074 LRP6O75581 1613 aa14.19□□□□□ -0.14
LTBR-203ENST00000441074 PRAMEF22A3QJZ6 481 aa14.19□□□□□ -0.14
LTBR-203ENST00000441074 EIF2S2P20042 333 aaKnown RBP14.19□□□□□ -0.14
LTBR-203ENST00000441074 C1orf141Q5JVX7 400 aa14.19□□□□□ -0.14
LTBR-203ENST00000441074 ZNF771Q7L3S4 317 aaPredicted RBP14.19□□□□□ -0.14
LTBR-203ENST00000441074 C8orf37Q96NL8 207 aa14.19□□□□□ -0.14
LTBR-203ENST00000441074 UPF3BQ9BZI7 483 aaKnown RBP14.19□□□□□ -0.14
LTBR-203ENST00000441074 CTNNA3Q9UI47 895 aa14.19□□□□□ -0.14
LTBR-203ENST00000441074 ATP6V1DQ9Y5K8 247 aa14.19□□□□□ -0.14
LTBR-203ENST00000441074 PHRF1Q9P1Y6 1649 aaKnown RBP14.19□□□□□ -0.14
LTBR-203ENST00000441074 SOS1Q07889 1333 aaPredicted RBP14.18□□□□□ -0.14
LTBR-203ENST00000441074 CRYBG1Q9Y4K1 1723 aa14.18□□□□□ -0.14
LTBR-203ENST00000441074 HTATSF1O43719 755 aaKnown RBP14.18□□□□□ -0.14
LTBR-203ENST00000441074 ANXA1P04083 346 aa14.18□□□□□ -0.14
LTBR-203ENST00000441074 AKAP4Q5JQC9 854 aa14.18□□□□□ -0.14
LTBR-203ENST00000441074 GIMAP6Q6P9H5 292 aa14.18□□□□□ -0.14
LTBR-203ENST00000441074 RAPGEF4Q8WZA2 1011 aa14.18□□□□□ -0.14
LTBR-203ENST00000441074 N4BP2Q86UW6 1770 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms