RNA–Protein interactions for RNA: ENST00000440192.1

SDCBPP1-201, Transcript of syndecan binding protein pseudogene 1, humanhuman

BASIC

Gene SDCBPP1, Length 890 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP1-201ENST00000440192 ZNF594Q96JF6 807 aaPredicted RBP6.97□□□□□ -1.29
SDCBPP1-201ENST00000440192 KIAA1024Q9UPX6 916 aa6.97□□□□□ -1.29
SDCBPP1-201ENST00000440192 MSTNO14793 375 aa6.96□□□□□ -1.3
SDCBPP1-201ENST00000440192 ZBTB7BO15156 539 aaPredicted RBP6.96□□□□□ -1.3
SDCBPP1-201ENST00000440192 RASA1P20936 1047 aa6.96□□□□□ -1.3
SDCBPP1-201ENST00000440192 EPHA4P54764 986 aa6.96□□□□□ -1.3
SDCBPP1-201ENST00000440192 PSMA6P60900 246 aaKnown RBP6.96□□□□□ -1.3
SDCBPP1-201ENST00000440192 SAMD5Q5TGI4 173 aa6.96□□□□□ -1.3
SDCBPP1-201ENST00000440192 CALR3Q96L12 384 aaKnown RBP6.96□□□□□ -1.3
SDCBPP1-201ENST00000440192 AVENQ9NQS1 362 aaPredicted RBP6.96□□□□□ -1.3
SDCBPP1-201ENST00000440192 GPC6Q9Y625 555 aaPredicted RBP6.96□□□□□ -1.3
SDCBPP1-201ENST00000440192 LAMC2Q13753 1193 aa6.95□□□□□ -1.3
SDCBPP1-201ENST00000440192 GRIN2CQ14957 1233 aa6.95□□□□□ -1.3
SDCBPP1-201ENST00000440192 PLA2G4EQ3MJ16 856 aa6.95□□□□□ -1.3
SDCBPP1-201ENST00000440192 BTBD6Q96KE9 485 aa6.95□□□□□ -1.3
SDCBPP1-201ENST00000440192 TSPAN10Q9H1Z9 355 aaPredicted RBP6.95□□□□□ -1.3
SDCBPP1-201ENST00000440192 TFIP11Q9UBB9 837 aaKnown RBP6.95□□□□□ -1.3
SDCBPP1-201ENST00000440192 M0R2N6 131 aa6.94□□□□□ -1.3
SDCBPP1-201ENST00000440192 EML1O00423 815 aa6.94□□□□□ -1.3
SDCBPP1-201ENST00000440192 GNB5O14775 395 aa6.94□□□□□ -1.3
SDCBPP1-201ENST00000440192 PPP1R12BO60237 982 aaPredicted RBP6.94□□□□□ -1.3
SDCBPP1-201ENST00000440192 PCBP4P57723 403 aaKnown RBP6.94□□□□□ -1.3
SDCBPP1-201ENST00000440192 LARP1Q6PKG0 1096 aaKnown RBP6.94□□□□□ -1.3
SDCBPP1-201ENST00000440192 ALYREFQ86V81 257 aaKnown RBP6.94□□□□□ -1.3
SDCBPP1-201ENST00000440192 TSEN2Q8NCE0 465 aaKnown RBP6.94□□□□□ -1.3
SDCBPP1-201ENST00000440192 ANKIB1Q9P2G1 1089 aa6.94□□□□□ -1.3
SDCBPP1-201ENST00000440192 HCN4Q9Y3Q4 1203 aa6.94□□□□□ -1.3
SDCBPP1-201ENST00000440192 SFI1A8K8P3 1242 aa6.93□□□□□ -1.3
SDCBPP1-201ENST00000440192 ALAS2P22557 587 aa6.93□□□□□ -1.3
SDCBPP1-201ENST00000440192 NEUROD1Q13562 356 aa6.93□□□□□ -1.3
SDCBPP1-201ENST00000440192 SUZ12Q15022 739 aaKnown RBP6.93□□□□□ -1.3
SDCBPP1-201ENST00000440192 ZNF468Q5VIY5 522 aaPredicted RBP6.93□□□□□ -1.3
SDCBPP1-201ENST00000440192 CHSY3Q70JA7 882 aa6.93□□□□□ -1.3
SDCBPP1-201ENST00000440192 SIX5Q8N196 739 aa6.93□□□□□ -1.3
SDCBPP1-201ENST00000440192 EFSO43281 561 aa6.92□□□□□ -1.3
SDCBPP1-201ENST00000440192 SEC13P55735 322 aa6.92□□□□□ -1.3
SDCBPP1-201ENST00000440192 SH3PXD2AQ5TCZ1 1133 aa6.92□□□□□ -1.3
SDCBPP1-201ENST00000440192 C1orf53Q5VUE5 145 aa6.92□□□□□ -1.3
SDCBPP1-201ENST00000440192 CHMP7Q8WUX9 453 aaPredicted RBP6.92□□□□□ -1.3
SDCBPP1-201ENST00000440192 CEP63Q96MT8 703 aa6.92□□□□□ -1.3
SDCBPP1-201ENST00000440192 HINFPQ9BQA5 517 aa6.92□□□□□ -1.3
SDCBPP1-201ENST00000440192 PHACTR1Q9C0D0 580 aa6.92□□□□□ -1.3
SDCBPP1-201ENST00000440192 STRN4Q9NRL3 753 aa6.92□□□□□ -1.3
SDCBPP1-201ENST00000440192 NOP53Q9NZM5 478 aaKnown RBP6.92□□□□□ -1.3
SDCBPP1-201ENST00000440192 TRIM26Q12899 539 aaPredicted RBP6.91□□□□□ -1.3
SDCBPP1-201ENST00000440192 SYT9Q86SS6 491 aa6.91□□□□□ -1.3
SDCBPP1-201ENST00000440192 FCHSD1Q86WN1 690 aa6.91□□□□□ -1.3
SDCBPP1-201ENST00000440192 SPOCK3Q9BQ16 436 aa6.91□□□□□ -1.3
SDCBPP1-201ENST00000440192 MAFBQ9Y5Q3 323 aaPredicted RBP6.91□□□□□ -1.3
SDCBPP1-201ENST00000440192 ATAD2Q6PL18 1390 aa6.91□□□□□ -1.3
SDCBPP1-201ENST00000440192 PDIA4P13667 645 aaKnown RBP6.9□□□□□ -1.3
SDCBPP1-201ENST00000440192 DGKGP49619 791 aa6.9□□□□□ -1.3
SDCBPP1-201ENST00000440192 HIF1AQ16665 826 aa6.9□□□□□ -1.3
SDCBPP1-201ENST00000440192 LINC00114Q6XXX2 140 aa6.9□□□□□ -1.3
SDCBPP1-201ENST00000440192 SCG3Q8WXD2 468 aaKnown RBP6.9□□□□□ -1.3
SDCBPP1-201ENST00000440192 PPP1R12CQ9BZL4 782 aa6.9□□□□□ -1.3
SDCBPP1-201ENST00000440192 BRD7Q9NPI1 651 aa6.9□□□□□ -1.3
SDCBPP1-201ENST00000440192 KLF15Q9UIH9 416 aa6.9□□□□□ -1.3
SDCBPP1-201ENST00000440192 COL8A1P27658 744 aa6.89□□□□□ -1.31
SDCBPP1-201ENST00000440192 LMOD1P29536 600 aaPredicted RBP6.89□□□□□ -1.31
SDCBPP1-201ENST00000440192 HIRAP54198 1017 aaPredicted RBP6.89□□□□□ -1.31
SDCBPP1-201ENST00000440192 SFSWAPQ12872 951 aaKnown RBP6.89□□□□□ -1.31
SDCBPP1-201ENST00000440192 GAS2L2Q8NHY3 880 aa6.89□□□□□ -1.31
SDCBPP1-201ENST00000440192 NGLY1Q96IV0 654 aa6.89□□□□□ -1.31
SDCBPP1-201ENST00000440192 HSH2DQ96JZ2 352 aa6.89□□□□□ -1.31
SDCBPP1-201ENST00000440192 SUV39H2Q9H5I1 410 aa6.89□□□□□ -1.31
SDCBPP1-201ENST00000440192 VRTNQ9H8Y1 702 aa6.89□□□□□ -1.31
SDCBPP1-201ENST00000440192 PODXL2Q9NZ53 605 aa6.89□□□□□ -1.31
SDCBPP1-201ENST00000440192 HCN2Q9UL51 889 aa6.89□□□□□ -1.31
SDCBPP1-201ENST00000440192 ELOA3CA0A087WX78 387 aaPredicted RBP6.88□□□□□ -1.31
SDCBPP1-201ENST00000440192 KRBA1A5PL33 1030 aa6.88□□□□□ -1.31
SDCBPP1-201ENST00000440192 ELOA3DA6NLF2 546 aaPredicted RBP6.88□□□□□ -1.31
SDCBPP1-201ENST00000440192 SPEM2Q0P670 501 aa6.88□□□□□ -1.31
SDCBPP1-201ENST00000440192 ELOA3BQ3SY89 546 aa6.88□□□□□ -1.31
SDCBPP1-201ENST00000440192 ALDH16A1Q8IZ83 802 aa6.88□□□□□ -1.31
SDCBPP1-201ENST00000440192 ELOA3Q8NG57 546 aa6.88□□□□□ -1.31
SDCBPP1-201ENST00000440192 SIN3BO75182 1162 aa6.87□□□□□ -1.31
SDCBPP1-201ENST00000440192 HOXB4P17483 251 aaPredicted RBP6.87□□□□□ -1.31
SDCBPP1-201ENST00000440192 DPYDQ12882 1025 aa6.87□□□□□ -1.31
SDCBPP1-201ENST00000440192 C7orf43Q8WVR3 580 aa6.87□□□□□ -1.31
SDCBPP1-201ENST00000440192 SUSD3Q96L08 255 aa6.87□□□□□ -1.31
SDCBPP1-201ENST00000440192 KCNH4Q9UQ05 1017 aa6.87□□□□□ -1.31
SDCBPP1-201ENST00000440192 SPDYE3A6NKU9 549 aa6.86□□□□□ -1.31
SDCBPP1-201ENST00000440192 PPP1R15AO75807 674 aaPredicted RBP6.86□□□□□ -1.31
SDCBPP1-201ENST00000440192 CRTC2Q53ET0 693 aaPredicted RBP6.86□□□□□ -1.31
SDCBPP1-201ENST00000440192 STAG2Q8N3U4 1231 aa6.86□□□□□ -1.31
SDCBPP1-201ENST00000440192 ZNF280CQ8ND82 737 aa6.86□□□□□ -1.31
SDCBPP1-201ENST00000440192 SLC30A3Q99726 388 aa6.86□□□□□ -1.31
SDCBPP1-201ENST00000440192 C2orf49Q9BVC5 232 aaPredicted RBP6.86□□□□□ -1.31
SDCBPP1-201ENST00000440192 TRAIPQ9BWF2 469 aa6.86□□□□□ -1.31
SDCBPP1-201ENST00000440192 USP17L15C9J2P7 530 aa6.85□□□□□ -1.31
SDCBPP1-201ENST00000440192 USP17L10C9JJH3 530 aa6.85□□□□□ -1.31
SDCBPP1-201ENST00000440192 USP17L13C9JLJ4 530 aa6.85□□□□□ -1.31
SDCBPP1-201ENST00000440192 USP17L12C9JPN9 530 aa6.85□□□□□ -1.31
SDCBPP1-201ENST00000440192 USP17L11C9JVI0 530 aa6.85□□□□□ -1.31
SDCBPP1-201ENST00000440192 USP17L21D6R901 530 aa6.85□□□□□ -1.31
SDCBPP1-201ENST00000440192 USP17L18D6R9N7 530 aa6.85□□□□□ -1.31
SDCBPP1-201ENST00000440192 USP17L22D6RA61 530 aa6.85□□□□□ -1.31
SDCBPP1-201ENST00000440192 USP17L17D6RBQ6 530 aa6.85□□□□□ -1.31
SDCBPP1-201ENST00000440192 USP17L19D6RCP7 530 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms