RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 ARHGAP45Q92619 1136 aa13.42□□□□□ -0.26
CCBE1-202ENST00000439986 SPTY2D1Q68D10 685 aaPredicted RBP13.42□□□□□ -0.26
CCBE1-202ENST00000439986 NME9Q86XW9 330 aa13.42□□□□□ -0.26
CCBE1-202ENST00000439986 C14orf93Q9H972 538 aaKnown RBP13.42□□□□□ -0.26
CCBE1-202ENST00000439986 ERLIN2O94905 339 aa13.42□□□□□ -0.26
CCBE1-202ENST00000439986 PRPF40BQ6NWY9 871 aaKnown RBP13.42□□□□□ -0.26
CCBE1-202ENST00000439986 TMX3Q96JJ7 454 aa13.42□□□□□ -0.26
CCBE1-202ENST00000439986 CARD14Q9BXL6 1004 aa13.42□□□□□ -0.26
CCBE1-202ENST00000439986 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
CCBE1-202ENST00000439986 CTTNBP2Q8WZ74 1663 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 TSHZ3Q63HK5 1081 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 CASQ1P31415 396 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 PRIM1P49642 420 aaKnown RBP13.41□□□□□ -0.26
CCBE1-202ENST00000439986 CEP57L1Q8IYX8 460 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 CEP120Q8N960 986 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 LARP6Q9BRS8 491 aaKnown RBP13.41□□□□□ -0.26
CCBE1-202ENST00000439986 CFAP45Q9UL16 551 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 CCDC57Q2TAC2 916 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 WAPLQ7Z5K2 1190 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 OSCARQ8IYS5 282 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 DDX11Q96FC9 970 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 ZBTB40Q9NUA8 1239 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 ZKSCAN5Q9Y2L8 839 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
CCBE1-202ENST00000439986 BLMP54132 1417 aaPredicted RBP13.41□□□□□ -0.26
CCBE1-202ENST00000439986 ZBTB17Q13105 803 aa13.4□□□□□ -0.26
CCBE1-202ENST00000439986 DHX8Q14562 1220 aaKnown RBP13.4□□□□□ -0.26
CCBE1-202ENST00000439986 TRIM22Q8IYM9 498 aa13.4□□□□□ -0.26
CCBE1-202ENST00000439986 FAM83GA6ND36 823 aa13.4□□□□□ -0.26
CCBE1-202ENST00000439986 RAPGEF3O95398 923 aa13.4□□□□□ -0.26
CCBE1-202ENST00000439986 DBN1Q16643 649 aa13.4□□□□□ -0.26
CCBE1-202ENST00000439986 ZHX1Q9UKY1 873 aaPredicted RBP13.4□□□□□ -0.26
CCBE1-202ENST00000439986 LRRFIP2Q9Y608 721 aaKnown RBP13.4□□□□□ -0.26
CCBE1-202ENST00000439986 RAPGEF6Q8TEU7 1601 aa13.4□□□□□ -0.26
CCBE1-202ENST00000439986 TSPY2A6NKD2 308 aa13.4□□□□□ -0.26
CCBE1-202ENST00000439986 TSPY3P0CV98 308 aa13.4□□□□□ -0.26
CCBE1-202ENST00000439986 TSPY8P0CW00 308 aa13.4□□□□□ -0.26
CCBE1-202ENST00000439986 TSPY1Q01534 308 aa13.4□□□□□ -0.26
CCBE1-202ENST00000439986 KIAA1328Q86T90 577 aa13.4□□□□□ -0.26
CCBE1-202ENST00000439986 TPD52L2O43399 206 aaKnown RBP13.4□□□□□ -0.26
CCBE1-202ENST00000439986 HCLS1P14317 486 aaPredicted RBP13.4□□□□□ -0.26
CCBE1-202ENST00000439986 NUDT16Q96DE0 195 aaKnown RBP13.4□□□□□ -0.26
CCBE1-202ENST00000439986 ZNF219Q9P2Y4 722 aaPredicted RBP13.4□□□□□ -0.26
CCBE1-202ENST00000439986 GLRX3O76003 335 aaKnown RBP13.4□□□□□ -0.27
CCBE1-202ENST00000439986 ZNF530Q6P9A1 599 aaPredicted RBP13.4□□□□□ -0.27
CCBE1-202ENST00000439986 MPP4Q96JB8 637 aa13.4□□□□□ -0.27
CCBE1-202ENST00000439986 KIF5CO60282 957 aa13.39□□□□□ -0.27
CCBE1-202ENST00000439986 ADRA2BP18089 450 aa13.39□□□□□ -0.27
CCBE1-202ENST00000439986 NACAP1Q9BZK3 213 aa13.39□□□□□ -0.27
CCBE1-202ENST00000439986 GIGYF2Q6Y7W6 1299 aaKnown RBP13.39□□□□□ -0.27
CCBE1-202ENST00000439986 ZNF608Q9ULD9 1512 aaPredicted RBP13.39□□□□□ -0.27
CCBE1-202ENST00000439986 BTBD11A6QL63 1104 aa13.39□□□□□ -0.27
CCBE1-202ENST00000439986 STIM1Q13586 685 aa13.39□□□□□ -0.27
CCBE1-202ENST00000439986 SCAND2PQ9GZW5 306 aaPredicted RBP13.39□□□□□ -0.27
CCBE1-202ENST00000439986 SLC4A8Q2Y0W8 1093 aa13.39□□□□□ -0.27
CCBE1-202ENST00000439986 CKAP2LQ8IYA6 745 aa13.39□□□□□ -0.27
CCBE1-202ENST00000439986 STX6O43752 255 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 ZNF830Q96NB3 372 aaPredicted RBP13.38□□□□□ -0.27
CCBE1-202ENST00000439986 PTPRCP08575 1304 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 ATP6V1E1P36543 226 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 C16orf45Q96MC5 204 aaPredicted RBP13.38□□□□□ -0.27
CCBE1-202ENST00000439986 SH2B1Q9NRF2 756 aaPredicted RBP13.38□□□□□ -0.27
CCBE1-202ENST00000439986 INSRP06213 1382 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 ANKRD36BQ8N2N9 1353 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 TTC36A6NLP5 189 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 BLVRAP53004 296 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 VGLL3A8MV65 326 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 RAB11FIP3O75154 756 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 SEPT6Q14141 434 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 PPP4R3BQ5MIZ7 849 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 PRIMPOLQ96LW4 560 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 IDH1O75874 414 aaKnown RBP13.38□□□□□ -0.27
CCBE1-202ENST00000439986 FBLN1P23142 703 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 UVSSAQ2YD98 709 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 LRP2BPQ9P2M1 347 aa13.38□□□□□ -0.27
CCBE1-202ENST00000439986 PTPN14Q15678 1187 aa13.37□□□□□ -0.27
CCBE1-202ENST00000439986 TRMT1LQ7Z2T5 733 aaKnown RBP13.37□□□□□ -0.27
CCBE1-202ENST00000439986 C16orf71Q8IYS4 520 aaPredicted RBP13.37□□□□□ -0.27
CCBE1-202ENST00000439986 DNA2P51530 1060 aa13.37□□□□□ -0.27
CCBE1-202ENST00000439986 IKBKGQ9Y6K9 419 aa13.37□□□□□ -0.27
CCBE1-202ENST00000439986 ZNF513Q8N8E2 541 aaPredicted RBP13.37□□□□□ -0.27
CCBE1-202ENST00000439986 ITSN2Q9NZM3 1697 aa13.37□□□□□ -0.27
CCBE1-202ENST00000439986 WDR62O43379 1518 aa13.37□□□□□ -0.27
CCBE1-202ENST00000439986 KRT32Q14532 448 aa13.37□□□□□ -0.27
CCBE1-202ENST00000439986 MRPL50Q8N5N7 158 aaKnown RBP13.37□□□□□ -0.27
CCBE1-202ENST00000439986 UBAC1Q9BSL1 405 aa13.37□□□□□ -0.27
CCBE1-202ENST00000439986 SPG7Q9UQ90 795 aa13.37□□□□□ -0.27
CCBE1-202ENST00000439986 UBE2HP62256 183 aa13.36□□□□□ -0.27
CCBE1-202ENST00000439986 HS1BP3Q53T59 392 aa13.36□□□□□ -0.27
CCBE1-202ENST00000439986 SCLT1Q96NL6 688 aa13.36□□□□□ -0.27
CCBE1-202ENST00000439986 MEIS3Q99687 375 aa13.36□□□□□ -0.27
CCBE1-202ENST00000439986 DNMT1P26358 1616 aaKnown RBP13.36□□□□□ -0.27
CCBE1-202ENST00000439986 ZGPATQ8N5A5 531 aaKnown RBP13.36□□□□□ -0.27
CCBE1-202ENST00000439986 TIGD1Q96MW7 591 aa13.36□□□□□ -0.27
CCBE1-202ENST00000439986 ABCF2Q9UG63 623 aa13.36□□□□□ -0.27
CCBE1-202ENST00000439986 CLIP2Q9UDT6 1046 aa13.36□□□□□ -0.27
CCBE1-202ENST00000439986 ANKRD44Q8N8A2 993 aa13.36□□□□□ -0.27
CCBE1-202ENST00000439986 IGBP1P78318 339 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms