RNA–Protein interactions for RNA: ENST00000439928.2

SPATA13-213, Transcript of spermatogenesis associated 13, humanhuman

TSL 1 (best) BASIC

Gene SPATA13, Length 1,721 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-213ENST00000439928 CCDC87Q9NVE4 849 aa15.32■□□□□ 0.04
SPATA13-213ENST00000439928 BCORQ6W2J9 1755 aa15.32■□□□□ 0.04
SPATA13-213ENST00000439928 CRKLP46109 303 aaKnown RBP15.31■□□□□ 0.04
SPATA13-213ENST00000439928 NEXNQ0ZGT2 675 aa15.31■□□□□ 0.04
SPATA13-213ENST00000439928 KIF6Q6ZMV9 814 aa15.31■□□□□ 0.04
SPATA13-213ENST00000439928 ZBTB1Q9Y2K1 713 aa15.31■□□□□ 0.04
SPATA13-213ENST00000439928 IL6STP40189 918 aaPredicted RBP15.31■□□□□ 0.04
SPATA13-213ENST00000439928 SRCIN1Q9C0H9 1055 aa15.31■□□□□ 0.04
SPATA13-213ENST00000439928 UBR3Q6ZT12 1888 aa15.3■□□□□ 0.04
SPATA13-213ENST00000439928 PLBD2Q8NHP8 589 aa15.3■□□□□ 0.04
SPATA13-213ENST00000439928 ARXQ96QS3 562 aa15.3■□□□□ 0.04
SPATA13-213ENST00000439928 HMGB2P26583 209 aaKnown RBP15.29■□□□□ 0.04
SPATA13-213ENST00000439928 B4GALNT3Q6L9W6 998 aa15.29■□□□□ 0.04
SPATA13-213ENST00000439928 LINC00116Q8NCU8 138 aa15.29■□□□□ 0.04
SPATA13-213ENST00000439928 CNTNAP4Q9C0A0 1308 aa15.29■□□□□ 0.04
SPATA13-213ENST00000439928 C4AP0C0L4 1744 aa15.29■□□□□ 0.04
SPATA13-213ENST00000439928 ZBTB7BO15156 539 aaPredicted RBP15.29■□□□□ 0.04
SPATA13-213ENST00000439928 KCNQ4P56696 695 aa15.29■□□□□ 0.04
SPATA13-213ENST00000439928 SLC27A3Q5K4L6 730 aa15.29■□□□□ 0.04
SPATA13-213ENST00000439928 INTS5Q6P9B9 1019 aaKnown RBP15.29■□□□□ 0.04
SPATA13-213ENST00000439928 TSHZ2Q9NRE2 1034 aa15.29■□□□□ 0.04
SPATA13-213ENST00000439928 ZBTB40Q9NUA8 1239 aa15.29■□□□□ 0.04
SPATA13-213ENST00000439928 SCN7AQ01118 1682 aa15.28■□□□□ 0.04
SPATA13-213ENST00000439928 TTLL7Q6ZT98 887 aa15.28■□□□□ 0.04
SPATA13-213ENST00000439928 APBA3O96018 575 aa15.27■□□□□ 0.04
SPATA13-213ENST00000439928 BEND3Q5T5X7 828 aa15.27■□□□□ 0.04
SPATA13-213ENST00000439928 LINS1Q8NG48 757 aa15.27■□□□□ 0.04
SPATA13-213ENST00000439928 METTL22Q9BUU2 404 aaPredicted RBP15.27■□□□□ 0.04
SPATA13-213ENST00000439928 ZBTB3Q9H5J0 574 aa15.27■□□□□ 0.04
SPATA13-213ENST00000439928 COL15A1P39059 1388 aa15.27■□□□□ 0.04
SPATA13-213ENST00000439928 MYH3P11055 1940 aa15.26■□□□□ 0.03
SPATA13-213ENST00000439928 ALDH1L1O75891 902 aa15.26■□□□□ 0.03
SPATA13-213ENST00000439928 GNAI3P08754 354 aa15.26■□□□□ 0.03
SPATA13-213ENST00000439928 EIF5P55010 431 aaKnown RBP15.26■□□□□ 0.03
SPATA13-213ENST00000439928 RC3H1Q5TC82 1133 aaKnown RBP15.26■□□□□ 0.03
SPATA13-213ENST00000439928 MYD88Q99836 296 aa15.26■□□□□ 0.03
SPATA13-213ENST00000439928 MAP3K15Q6ZN16 1313 aa15.26■□□□□ 0.03
SPATA13-213ENST00000439928 PLSCR1O15162 318 aa15.26■□□□□ 0.03
SPATA13-213ENST00000439928 DZIP3Q86Y13 1208 aaKnown RBP15.26■□□□□ 0.03
SPATA13-213ENST00000439928 MEIS3Q99687 375 aa15.26■□□□□ 0.03
SPATA13-213ENST00000439928 TUBGCP6Q96RT7 1819 aa15.25■□□□□ 0.03
SPATA13-213ENST00000439928 A0A087WZG4 1122 aa15.24■□□□□ 0.03
SPATA13-213ENST00000439928 GNPATO15228 680 aa15.24■□□□□ 0.03
SPATA13-213ENST00000439928 UBTFL1P0CB47 393 aaPredicted RBP15.24■□□□□ 0.03
SPATA13-213ENST00000439928 CWF19L2Q2TBE0 894 aaKnown RBP15.24■□□□□ 0.03
SPATA13-213ENST00000439928 AK7Q96M32 723 aa15.24■□□□□ 0.03
SPATA13-213ENST00000439928 C9orf78Q9NZ63 289 aaPredicted RBP15.24■□□□□ 0.03
SPATA13-213ENST00000439928 NEURL1BA8MQ27 555 aa15.23■□□□□ 0.03
SPATA13-213ENST00000439928 TXNRD1Q16881 649 aa15.23■□□□□ 0.03
SPATA13-213ENST00000439928 HSP90AB3PQ58FF7 597 aa15.23■□□□□ 0.03
SPATA13-213ENST00000439928 C1orf115Q9H7X2 142 aa15.23■□□□□ 0.03
SPATA13-213ENST00000439928 TBC1D2BQ9UPU7 963 aa15.23■□□□□ 0.03
SPATA13-213ENST00000439928 RTCBQ9Y3I0 505 aaKnown RBP15.23■□□□□ 0.03
SPATA13-213ENST00000439928 IBTKQ9P2D0 1353 aaPredicted RBP15.23■□□□□ 0.03
SPATA13-213ENST00000439928 ERVV-1B6SEH8 477 aa15.23■□□□□ 0.03
SPATA13-213ENST00000439928 SOCS7O14512 581 aa15.23■□□□□ 0.03
SPATA13-213ENST00000439928 GNAI2P04899 355 aa15.23■□□□□ 0.03
SPATA13-213ENST00000439928 SF3B2Q13435 895 aaKnown RBP15.23■□□□□ 0.03
SPATA13-213ENST00000439928 LRRC4BQ9NT99 713 aa15.23■□□□□ 0.03
SPATA13-213ENST00000439928 HDAC5Q9UQL6 1122 aa15.23■□□□□ 0.03
SPATA13-213ENST00000439928 PCDHB15Q9Y5E8 787 aa15.23■□□□□ 0.03
SPATA13-213ENST00000439928 ATP5J2-PTCD1G3V325 749 aa15.22■□□□□ 0.03
SPATA13-213ENST00000439928 RPS6KA4O75676 772 aa15.22■□□□□ 0.03
SPATA13-213ENST00000439928 IGKV5-2P06315 115 aa15.22■□□□□ 0.03
SPATA13-213ENST00000439928 GIGYF2Q6Y7W6 1299 aaKnown RBP15.22■□□□□ 0.03
SPATA13-213ENST00000439928 USP44Q9H0E7 712 aa15.22■□□□□ 0.03
SPATA13-213ENST00000439928 RWDD1Q9H446 243 aaPredicted RBP15.22■□□□□ 0.03
SPATA13-213ENST00000439928 GRM8O00222 908 aa15.21■□□□□ 0.03
SPATA13-213ENST00000439928 ZNF652Q9Y2D9 606 aa15.21■□□□□ 0.03
SPATA13-213ENST00000439928 TCIRG1Q13488 830 aa15.2■□□□□ 0.02
SPATA13-213ENST00000439928 GCKRQ14397 625 aa15.2■□□□□ 0.02
SPATA13-213ENST00000439928 CENPQQ7L2Z9 268 aaPredicted RBP15.2■□□□□ 0.02
SPATA13-213ENST00000439928 CWC25Q9NXE8 425 aaPredicted RBP15.2■□□□□ 0.02
SPATA13-213ENST00000439928 CCDC191Q8NCU4 936 aa15.2■□□□□ 0.02
SPATA13-213ENST00000439928 CASZ1Q86V15 1759 aa15.2■□□□□ 0.02
SPATA13-213ENST00000439928 QSER1Q2KHR3 1735 aa15.19■□□□□ 0.02
SPATA13-213ENST00000439928 LAMB2P55268 1798 aa15.19■□□□□ 0.02
SPATA13-213ENST00000439928 NBPF7P0C2Y1 421 aaPredicted RBP15.19■□□□□ 0.02
SPATA13-213ENST00000439928 HLFQ16534 295 aa15.19■□□□□ 0.02
SPATA13-213ENST00000439928 LRRFIP2Q9Y608 721 aaKnown RBP15.19■□□□□ 0.02
SPATA13-213ENST00000439928 ZPR1O75312 459 aa15.18■□□□□ 0.02
SPATA13-213ENST00000439928 ADRA2BP18089 450 aa15.18■□□□□ 0.02
SPATA13-213ENST00000439928 HDAC1Q13547 482 aaPredicted RBP15.18■□□□□ 0.02
SPATA13-213ENST00000439928 TRAPPC3LQ5T215 181 aa15.18■□□□□ 0.02
SPATA13-213ENST00000439928 RPAP2Q8IXW5 612 aaPredicted RBP15.18■□□□□ 0.02
SPATA13-213ENST00000439928 PROM2Q8N271 834 aa15.18■□□□□ 0.02
SPATA13-213ENST00000439928 UTYO14607 1347 aa15.18■□□□□ 0.02
SPATA13-213ENST00000439928 HMMRO75330 724 aa15.17■□□□□ 0.02
SPATA13-213ENST00000439928 PHF14O94880 888 aa15.17■□□□□ 0.02
SPATA13-213ENST00000439928 CAMTA2O94983 1202 aa15.17■□□□□ 0.02
SPATA13-213ENST00000439928 BAG6P46379 1132 aa15.17■□□□□ 0.02
SPATA13-213ENST00000439928 TRIM28Q13263 835 aaKnown RBP15.17■□□□□ 0.02
SPATA13-213ENST00000439928 ISCA1Q9BUE6 129 aa15.17■□□□□ 0.02
SPATA13-213ENST00000439928 COL24A1Q17RW2 1714 aa15.17■□□□□ 0.02
SPATA13-213ENST00000439928 GPTP24298 496 aa15.17■□□□□ 0.02
SPATA13-213ENST00000439928 RFC4P35249 363 aa15.17■□□□□ 0.02
SPATA13-213ENST00000439928 CEP85Q6P2H3 762 aa15.17■□□□□ 0.02
SPATA13-213ENST00000439928 CLEC4GQ6UXB4 293 aa15.17■□□□□ 0.02
SPATA13-213ENST00000439928 UBE3BQ7Z3V4 1068 aa15.17■□□□□ 0.02
SPATA13-213ENST00000439928 ANKRD44Q8N8A2 993 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms