RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 U2SURPO15042 1029 aaKnown RBP13.26□□□□□ -0.29
CCDC66-207ENST00000439445 KCPQ6ZWJ8 1503 aa13.26□□□□□ -0.29
CCDC66-207ENST00000439445 BCL2L12Q9HB09 334 aa13.26□□□□□ -0.29
CCDC66-207ENST00000439445 BMP2KQ9NSY1 1161 aaPredicted RBP13.26□□□□□ -0.29
CCDC66-207ENST00000439445 SBF1O95248 1867 aa13.25□□□□□ -0.29
CCDC66-207ENST00000439445 AFDNP55196 1824 aaKnown RBP13.25□□□□□ -0.29
CCDC66-207ENST00000439445 MRC1P22897 1456 aa13.25□□□□□ -0.29
CCDC66-207ENST00000439445 TEFQ10587 303 aa13.25□□□□□ -0.29
CCDC66-207ENST00000439445 FSTL1Q12841 308 aa13.25□□□□□ -0.29
CCDC66-207ENST00000439445 BICDL1Q6ZP65 573 aa13.25□□□□□ -0.29
CCDC66-207ENST00000439445 IFNL1Q8IU54 200 aa13.25□□□□□ -0.29
CCDC66-207ENST00000439445 TTLL6Q8N841 843 aa13.25□□□□□ -0.29
CCDC66-207ENST00000439445 GNAT3A8MTJ3 354 aa13.24□□□□□ -0.29
CCDC66-207ENST00000439445 H0YIN7 160 aa13.24□□□□□ -0.29
CCDC66-207ENST00000439445 RASSF7Q02833 373 aa13.24□□□□□ -0.29
CCDC66-207ENST00000439445 C2CD5Q86YS7 1000 aa13.24□□□□□ -0.29
CCDC66-207ENST00000439445 A0A087WZG4 1122 aa13.23□□□□□ -0.29
CCDC66-207ENST00000439445 LMNB1P20700 586 aa13.23□□□□□ -0.29
CCDC66-207ENST00000439445 ATN1P54259 1190 aaPredicted RBP13.23□□□□□ -0.29
CCDC66-207ENST00000439445 EIF5P55010 431 aaKnown RBP13.23□□□□□ -0.29
CCDC66-207ENST00000439445 HTRA3P83110 453 aa13.23□□□□□ -0.29
CCDC66-207ENST00000439445 IL17REQ8NFR9 667 aa13.23□□□□□ -0.29
CCDC66-207ENST00000439445 ZNF330Q9Y3S2 320 aaPredicted RBP13.23□□□□□ -0.29
CCDC66-207ENST00000439445 ZNF790Q6PG37 636 aa13.22□□□□□ -0.29
CCDC66-207ENST00000439445 GAS2L2Q8NHY3 880 aa13.22□□□□□ -0.29
CCDC66-207ENST00000439445 SLC39A7Q92504 469 aa13.22□□□□□ -0.29
CCDC66-207ENST00000439445 ZNF496Q96IT1 587 aaPredicted RBP13.22□□□□□ -0.29
CCDC66-207ENST00000439445 TEX13AQ9BXU3 409 aaPredicted RBP13.22□□□□□ -0.29
CCDC66-207ENST00000439445 NRXN2Q9P2S2 1712 aa13.22□□□□□ -0.29
CCDC66-207ENST00000439445 TBC1D9BQ66K14 1250 aa13.21□□□□□ -0.29
CCDC66-207ENST00000439445 NPM2Q86SE8 214 aaKnown RBP13.21□□□□□ -0.29
CCDC66-207ENST00000439445 TBC1D2BQ9UPU7 963 aa13.21□□□□□ -0.29
CCDC66-207ENST00000439445 UBR2Q8IWV8 1755 aa13.21□□□□□ -0.29
CCDC66-207ENST00000439445 WDR90Q96KV7 1748 aa13.21□□□□□ -0.3
CCDC66-207ENST00000439445 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
CCDC66-207ENST00000439445 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
CCDC66-207ENST00000439445 ZC3H4Q9UPT8 1303 aaKnown RBP13.2□□□□□ -0.3
CCDC66-207ENST00000439445 GLTPD2A6NH11 291 aa13.2□□□□□ -0.3
CCDC66-207ENST00000439445 VEGFAP15692 232 aaPredicted RBP13.2□□□□□ -0.3
CCDC66-207ENST00000439445 PRELPP51888 382 aa13.2□□□□□ -0.3
CCDC66-207ENST00000439445 CCDC24Q8N4L8 307 aa13.2□□□□□ -0.3
CCDC66-207ENST00000439445 SMC1BQ8NDV3 1235 aa13.2□□□□□ -0.3
CCDC66-207ENST00000439445 ZNF622Q969S3 477 aaKnown RBP eCLIP13.2□□□□□ -0.32e-6■■□□□ 14.2
CCDC66-207ENST00000439445 KLRG1Q96E93 195 aa13.2□□□□□ -0.3
CCDC66-207ENST00000439445 METRNQ9UJH8 293 aa13.2□□□□□ -0.3
CCDC66-207ENST00000439445 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
CCDC66-207ENST00000439445 CCDC88AQ3V6T2 1871 aa13.2□□□□□ -0.3
CCDC66-207ENST00000439445 TNRC6CQ9HCJ0 1690 aaKnown RBP13.19□□□□□ -0.3
CCDC66-207ENST00000439445 TTLL13PA6NNM8 815 aa13.19□□□□□ -0.3
CCDC66-207ENST00000439445 A1BGP04217 495 aa13.19□□□□□ -0.3
CCDC66-207ENST00000439445 C7P10643 843 aa13.19□□□□□ -0.3
CCDC66-207ENST00000439445 PDE6BP35913 854 aa13.19□□□□□ -0.3
CCDC66-207ENST00000439445 IL6STP40189 918 aaPredicted RBP13.19□□□□□ -0.3
CCDC66-207ENST00000439445 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
CCDC66-207ENST00000439445 NPC1L1Q9UHC9 1359 aa13.19□□□□□ -0.3
CCDC66-207ENST00000439445 COL3A1P02461 1466 aaPredicted RBP13.18□□□□□ -0.3
CCDC66-207ENST00000439445 DLEC1Q9Y238 1755 aa13.18□□□□□ -0.3
CCDC66-207ENST00000439445 NFKBIEO00221 500 aa13.18□□□□□ -0.3
CCDC66-207ENST00000439445 NPHP1O15259 732 aa13.18□□□□□ -0.3
CCDC66-207ENST00000439445 SETDB2Q96T68 719 aa13.18□□□□□ -0.3
CCDC66-207ENST00000439445 BRIP1Q9BX63 1249 aa13.18□□□□□ -0.3
CCDC66-207ENST00000439445 PDZRN3Q9UPQ7 1066 aa13.18□□□□□ -0.3
CCDC66-207ENST00000439445 BTBD11A6QL63 1104 aa13.17□□□□□ -0.3
CCDC66-207ENST00000439445 C21orf2O43822 256 aa13.17□□□□□ -0.3
CCDC66-207ENST00000439445 CHRM1P11229 460 aaPredicted RBP13.17□□□□□ -0.3
CCDC66-207ENST00000439445 PRKAR2BP31323 418 aa13.17□□□□□ -0.3
CCDC66-207ENST00000439445 PRR5LQ6MZQ0 368 aa13.17□□□□□ -0.3
CCDC66-207ENST00000439445 DPY19L2Q6NUT2 758 aa13.17□□□□□ -0.3
CCDC66-207ENST00000439445 PHACTR3Q96KR7 559 aa13.17□□□□□ -0.3
CCDC66-207ENST00000439445 CFAP53Q96M91 514 aa13.17□□□□□ -0.3
CCDC66-207ENST00000439445 KCNQ3O43525 872 aa13.16□□□□□ -0.3
CCDC66-207ENST00000439445 JMYQ8N9B5 988 aa13.16□□□□□ -0.3
CCDC66-207ENST00000439445 NUDCQ9Y266 331 aa13.16□□□□□ -0.3
CCDC66-207ENST00000439445 SIPA1L3O60292 1781 aaPredicted RBP13.15□□□□□ -0.3
CCDC66-207ENST00000439445 ANKRD31Q8N7Z5 1873 aa13.15□□□□□ -0.3
CCDC66-207ENST00000439445 CAMTA2O94983 1202 aa13.15□□□□□ -0.3
CCDC66-207ENST00000439445 ERFEQ4G0M1 354 aa13.15□□□□□ -0.3
CCDC66-207ENST00000439445 DZIP3Q86Y13 1208 aaKnown RBP13.15□□□□□ -0.3
CCDC66-207ENST00000439445 CNBD1Q8NA66 436 aa13.15□□□□□ -0.3
CCDC66-207ENST00000439445 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.3
CCDC66-207ENST00000439445 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
CCDC66-207ENST00000439445 CEMIPQ8WUJ3 1361 aa13.15□□□□□ -0.3
CCDC66-207ENST00000439445 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
CCDC66-207ENST00000439445 ST5P78524 1137 aa13.14□□□□□ -0.31
CCDC66-207ENST00000439445 ZNF467Q7Z7K2 595 aaPredicted RBP13.14□□□□□ -0.31
CCDC66-207ENST00000439445 RTF1Q92541 710 aaKnown RBP13.14□□□□□ -0.31
CCDC66-207ENST00000439445 TIAM2Q8IVF5 1701 aa13.13□□□□□ -0.31
CCDC66-207ENST00000439445 SCN7AQ01118 1682 aa13.13□□□□□ -0.31
CCDC66-207ENST00000439445 U2AF1L5P0DN76 240 aaPredicted RBP13.13□□□□□ -0.31
CCDC66-207ENST00000439445 U2AF1Q01081 240 aaKnown RBP eCLIP13.13□□□□□ -0.31
CCDC66-207ENST00000439445 CNKSR1Q969H4 720 aa13.13□□□□□ -0.31
CCDC66-207ENST00000439445 TMEM106CQ9BVX2 250 aa13.13□□□□□ -0.31
CCDC66-207ENST00000439445 PCDHB8Q9UN66 801 aa13.13□□□□□ -0.31
CCDC66-207ENST00000439445 PRAMEF22A3QJZ6 481 aa13.12□□□□□ -0.31
CCDC66-207ENST00000439445 POTECB2RU33 542 aa13.12□□□□□ -0.31
CCDC66-207ENST00000439445 SRGNP10124 158 aa13.12□□□□□ -0.31
CCDC66-207ENST00000439445 COL13A1Q5TAT6 717 aaPredicted RBP13.12□□□□□ -0.31
CCDC66-207ENST00000439445 STYK1Q6J9G0 422 aa13.12□□□□□ -0.31
CCDC66-207ENST00000439445 MCM10Q7L590 875 aa13.12□□□□□ -0.31
CCDC66-207ENST00000439445 TAOK3Q9H2K8 898 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms