RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 CCT4P50991 539 aaKnown RBP26.23■■□□□ 1.79
CHD3-204ENST00000439235 MVPQ14764 893 aaKnown RBP26.23■■□□□ 1.79
CHD3-204ENST00000439235 SLC4A10Q6U841 1118 aa26.23■■□□□ 1.79
CHD3-204ENST00000439235 TMEM57Q8N5G2 664 aa26.23■■□□□ 1.79
CHD3-204ENST00000439235 MAP3K2Q9Y2U5 619 aa26.23■■□□□ 1.79
CHD3-204ENST00000439235 FKBP8Q14318 412 aa26.22■■□□□ 1.79
CHD3-204ENST00000439235 TTLL7Q6ZT98 887 aa26.22■■□□□ 1.79
CHD3-204ENST00000439235 ITPRIPQ8IWB1 547 aa26.22■■□□□ 1.79
CHD3-204ENST00000439235 CAMKK2Q96RR4 588 aa26.22■■□□□ 1.79
CHD3-204ENST00000439235 CRBNQ96SW2 442 aa26.22■■□□□ 1.79
CHD3-204ENST00000439235 COG6Q9Y2V7 657 aa26.22■■□□□ 1.79
CHD3-204ENST00000439235 RTCBQ9Y3I0 505 aaKnown RBP26.22■■□□□ 1.79
CHD3-204ENST00000439235 EN1Q05925 392 aaPredicted RBP26.21■■□□□ 1.79
CHD3-204ENST00000439235 INTS3Q68E01 1043 aaKnown RBP26.21■■□□□ 1.79
CHD3-204ENST00000439235 DZIP3Q86Y13 1208 aaKnown RBP26.21■■□□□ 1.79
CHD3-204ENST00000439235 ATP10DQ9P241 1426 aa26.21■■□□□ 1.79
CHD3-204ENST00000439235 MYH14Q7Z406 1995 aaKnown RBP26.2■■□□□ 1.79
CHD3-204ENST00000439235 MAP3K15Q6ZN16 1313 aa26.2■■□□□ 1.79
CHD3-204ENST00000439235 DDX19BQ9UMR2 479 aa26.2■■□□□ 1.78
CHD3-204ENST00000439235 NEXNQ0ZGT2 675 aa26.19■■□□□ 1.78
CHD3-204ENST00000439235 EZH2Q15910 746 aaKnown RBP26.19■■□□□ 1.78
CHD3-204ENST00000439235 ERICH6BQ5W0A0 696 aa26.19■■□□□ 1.78
CHD3-204ENST00000439235 ARXQ96QS3 562 aa26.19■■□□□ 1.78
CHD3-204ENST00000439235 CHMP4BQ9H444 224 aaKnown RBP26.19■■□□□ 1.78
CHD3-204ENST00000439235 N4BP2Q86UW6 1770 aaPredicted RBP26.18■■□□□ 1.78
CHD3-204ENST00000439235 METTL22Q9BUU2 404 aaPredicted RBP26.18■■□□□ 1.78
CHD3-204ENST00000439235 ZBTB3Q9H5J0 574 aa26.18■■□□□ 1.78
CHD3-204ENST00000439235 ARFGEF2Q9Y6D5 1785 aa26.18■■□□□ 1.78
CHD3-204ENST00000439235 NUP188Q5SRE5 1749 aa26.17■■□□□ 1.78
CHD3-204ENST00000439235 ERVV-1B6SEH8 477 aa26.17■■□□□ 1.78
CHD3-204ENST00000439235 ADRA2BP18089 450 aa26.17■■□□□ 1.78
CHD3-204ENST00000439235 SRCIN1Q9C0H9 1055 aa26.17■■□□□ 1.78
CHD3-204ENST00000439235 BEND3Q5T5X7 828 aa26.16■■□□□ 1.78
CHD3-204ENST00000439235 EXOC6Q8TAG9 804 aa26.16■■□□□ 1.78
CHD3-204ENST00000439235 EP400Q96L91 3159 aa26.16■■□□□ 1.78
CHD3-204ENST00000439235 ALDH1L1O75891 902 aa26.15■■□□□ 1.78
CHD3-204ENST00000439235 SSFA2P28290 1259 aa26.15■■□□□ 1.78
CHD3-204ENST00000439235 HSP90AB3PQ58FF7 597 aa26.15■■□□□ 1.78
CHD3-204ENST00000439235 LINS1Q8NG48 757 aa26.15■■□□□ 1.78
CHD3-204ENST00000439235 TBC1D2BQ9UPU7 963 aa26.15■■□□□ 1.78
CHD3-204ENST00000439235 RGL2O15211 777 aa26.14■■□□□ 1.78
CHD3-204ENST00000439235 AAMPQ13685 434 aa26.14■■□□□ 1.78
CHD3-204ENST00000439235 DEFB132Q7Z7B7 95 aa26.14■■□□□ 1.78
CHD3-204ENST00000439235 MYD88Q99836 296 aa26.14■■□□□ 1.78
CHD3-204ENST00000439235 IBTKQ9P2D0 1353 aaPredicted RBP26.13■■□□□ 1.77
CHD3-204ENST00000439235 TRAPPC3LQ5T215 181 aa26.13■■□□□ 1.77
CHD3-204ENST00000439235 GIGYF2Q6Y7W6 1299 aaKnown RBP26.13■■□□□ 1.77
CHD3-204ENST00000439235 AKT1S1Q96B36 256 aa26.13■■□□□ 1.77
CHD3-204ENST00000439235 CAMTA2O94983 1202 aa26.12■■□□□ 1.77
CHD3-204ENST00000439235 ZNF652Q9Y2D9 606 aa26.12■■□□□ 1.77
CHD3-204ENST00000439235 SCN7AQ01118 1682 aa26.12■■□□□ 1.77
CHD3-204ENST00000439235 UBR3Q6ZT12 1888 aa26.11■■□□□ 1.77
CHD3-204ENST00000439235 BCORQ6W2J9 1755 aa26.11■■□□□ 1.77
CHD3-204ENST00000439235 PHF14O94880 888 aa26.11■■□□□ 1.77
CHD3-204ENST00000439235 ZNF827Q17R98 1081 aa26.11■■□□□ 1.77
CHD3-204ENST00000439235 GTF3C3Q9Y5Q9 886 aa26.11■■□□□ 1.77
CHD3-204ENST00000439235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.1■■□□□ 1.77
CHD3-204ENST00000439235 TCIRG1Q13488 830 aa26.1■■□□□ 1.77
CHD3-204ENST00000439235 ARHGEF1Q92888 912 aaKnown RBP26.1■■□□□ 1.77
CHD3-204ENST00000439235 NARFQ9UHQ1 456 aa26.1■■□□□ 1.77
CHD3-204ENST00000439235 ZPR1O75312 459 aa26.09■■□□□ 1.77
CHD3-204ENST00000439235 IGKV5-2P06315 115 aa26.09■■□□□ 1.77
CHD3-204ENST00000439235 RFC4P35249 363 aa26.09■■□□□ 1.77
CHD3-204ENST00000439235 FLAD1Q8NFF5 587 aa26.09■■□□□ 1.77
CHD3-204ENST00000439235 STK32BQ9NY57 414 aa26.09■■□□□ 1.77
CHD3-204ENST00000439235 TFCP2L1Q9NZI6 479 aa26.09■■□□□ 1.77
CHD3-204ENST00000439235 NEURL1BA8MQ27 555 aa26.08■■□□□ 1.77
CHD3-204ENST00000439235 HLFQ16534 295 aa26.08■■□□□ 1.77
CHD3-204ENST00000439235 CWF19L2Q2TBE0 894 aaKnown RBP26.08■■□□□ 1.77
CHD3-204ENST00000439235 CLEC4GQ6UXB4 293 aa26.08■■□□□ 1.77
CHD3-204ENST00000439235 C4AP0C0L4 1744 aa26.08■■□□□ 1.76
CHD3-204ENST00000439235 ZBTB7BO15156 539 aaPredicted RBP26.07■■□□□ 1.76
CHD3-204ENST00000439235 GNAI3P08754 354 aa26.07■■□□□ 1.76
CHD3-204ENST00000439235 AMIGO3Q86WK7 504 aa26.07■■□□□ 1.76
CHD3-204ENST00000439235 ISCA1Q9BUE6 129 aa26.07■■□□□ 1.76
CHD3-204ENST00000439235 USP42Q9H9J4 1324 aaKnown RBP26.07■■□□□ 1.76
CHD3-204ENST00000439235 SMIM5Q71RC9 77 aa26.06■■□□□ 1.76
CHD3-204ENST00000439235 ANKRD36CQ5JPF3 1778 aa26.05■■□□□ 1.76
CHD3-204ENST00000439235 ATP5J2-PTCD1G3V325 749 aa26.05■■□□□ 1.76
CHD3-204ENST00000439235 TRIM28Q13263 835 aaKnown RBP26.05■■□□□ 1.76
CHD3-204ENST00000439235 USPL1Q5W0Q7 1092 aa26.05■■□□□ 1.76
CHD3-204ENST00000439235 CCDC191Q8NCU4 936 aa26.05■■□□□ 1.76
CHD3-204ENST00000439235 ZBTB40Q9NUA8 1239 aa26.05■■□□□ 1.76
CHD3-204ENST00000439235 CWC25Q9NXE8 425 aaPredicted RBP26.05■■□□□ 1.76
CHD3-204ENST00000439235 GCKRQ14397 625 aa26.04■■□□□ 1.76
CHD3-204ENST00000439235 SLC15A2Q16348 729 aa26.04■■□□□ 1.76
CHD3-204ENST00000439235 MEIS3Q99687 375 aa26.04■■□□□ 1.76
CHD3-204ENST00000439235 ANO8Q9HCE9 1232 aaPredicted RBP26.04■■□□□ 1.76
CHD3-204ENST00000439235 C9orf78Q9NZ63 289 aaPredicted RBP26.04■■□□□ 1.76
CHD3-204ENST00000439235 SRP68Q9UHB9 627 aaKnown RBP26.04■■□□□ 1.76
CHD3-204ENST00000439235 HDAC5Q9UQL6 1122 aa26.03■■□□□ 1.76
CHD3-204ENST00000439235 AFDNP55196 1824 aaKnown RBP26.02■■□□□ 1.76
CHD3-204ENST00000439235 GRM8O00222 908 aa26.02■■□□□ 1.76
CHD3-204ENST00000439235 UBTFL1P0CB47 393 aaPredicted RBP26.02■■□□□ 1.76
CHD3-204ENST00000439235 ZNF34Q8IZ26 560 aa26.02■■□□□ 1.76
CHD3-204ENST00000439235 USP44Q9H0E7 712 aa26.02■■□□□ 1.76
CHD3-204ENST00000439235 NUP98P52948 1817 aa26.02■■□□□ 1.76
CHD3-204ENST00000439235 PARP10Q53GL7 1025 aa26.01■■□□□ 1.75
CHD3-204ENST00000439235 TUBGCP6Q96RT7 1819 aa26.01■■□□□ 1.75
CHD3-204ENST00000439235 QSER1Q2KHR3 1735 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms