RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 CRKLP46109 303 aaKnown RBP9.15□□□□□ -0.94
ERCC8-203ENST00000439176 SLC52A2Q9HAB3 445 aa9.15□□□□□ -0.94
ERCC8-203ENST00000439176 WWC3Q9ULE0 1092 aa9.15□□□□□ -0.94
ERCC8-203ENST00000439176 BOLA1Q9Y3E2 137 aa9.15□□□□□ -0.94
ERCC8-203ENST00000439176 ZNF831Q5JPB2 1677 aa9.15□□□□□ -0.94
ERCC8-203ENST00000439176 ATP10DQ9P241 1426 aa9.14□□□□□ -0.95
ERCC8-203ENST00000439176 PER1O15534 1290 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-203ENST00000439176 HOXB3P14651 431 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-203ENST00000439176 HOXB1P14653 301 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-203ENST00000439176 ZNF710Q8N1W2 664 aa9.14□□□□□ -0.95
ERCC8-203ENST00000439176 BCS1LQ9Y276 419 aa9.14□□□□□ -0.95
ERCC8-203ENST00000439176 A0A0G2JLW4 131 aa9.13□□□□□ -0.95
ERCC8-203ENST00000439176 RNMTO43148 476 aaKnown RBP9.13□□□□□ -0.95
ERCC8-203ENST00000439176 TTC5Q8N0Z6 440 aa9.13□□□□□ -0.95
ERCC8-203ENST00000439176 ZNF526Q8TF50 670 aaPredicted RBP9.13□□□□□ -0.95
ERCC8-203ENST00000439176 CFAP53Q96M91 514 aa9.13□□□□□ -0.95
ERCC8-203ENST00000439176 NPC1L1Q9UHC9 1359 aa9.12□□□□□ -0.95
ERCC8-203ENST00000439176 USP42Q9H9J4 1324 aaKnown RBP9.12□□□□□ -0.95
ERCC8-203ENST00000439176 U2SURPO15042 1029 aaKnown RBP9.12□□□□□ -0.95
ERCC8-203ENST00000439176 GTPBP6O43824 516 aaPredicted RBP9.12□□□□□ -0.95
ERCC8-203ENST00000439176 FCHSD2O94868 740 aa9.12□□□□□ -0.95
ERCC8-203ENST00000439176 STARD3NLO95772 234 aa9.12□□□□□ -0.95
ERCC8-203ENST00000439176 CNGB1Q14028 1251 aaPredicted RBP9.12□□□□□ -0.95
ERCC8-203ENST00000439176 MTHFSDQ2M296 383 aaKnown RBP9.12□□□□□ -0.95
ERCC8-203ENST00000439176 ARHGAP27Q6ZUM4 889 aa9.12□□□□□ -0.95
ERCC8-203ENST00000439176 NPM2Q86SE8 214 aaKnown RBP9.12□□□□□ -0.95
ERCC8-203ENST00000439176 VSIG10Q8N0Z9 540 aa9.12□□□□□ -0.95
ERCC8-203ENST00000439176 GAS2L2Q8NHY3 880 aa9.12□□□□□ -0.95
ERCC8-203ENST00000439176 LGR6Q9HBX8 967 aa9.12□□□□□ -0.95
ERCC8-203ENST00000439176 PIM2Q9P1W9 311 aa9.12□□□□□ -0.95
ERCC8-203ENST00000439176 CICQ96RK0 1608 aaPredicted RBP9.12□□□□□ -0.95
ERCC8-203ENST00000439176 PXDNLA1KZ92 1463 aa9.11□□□□□ -0.95
ERCC8-203ENST00000439176 DPEP1P16444 411 aa9.11□□□□□ -0.95
ERCC8-203ENST00000439176 TEFQ10587 303 aa9.11□□□□□ -0.95
ERCC8-203ENST00000439176 SLC39A6Q13433 755 aa9.11□□□□□ -0.95
ERCC8-203ENST00000439176 DALRD3Q5D0E6 543 aaKnown RBP9.11□□□□□ -0.95
ERCC8-203ENST00000439176 INTS5Q6P9B9 1019 aaKnown RBP9.11□□□□□ -0.95
ERCC8-203ENST00000439176 DNAJC10Q8IXB1 793 aa9.11□□□□□ -0.95
ERCC8-203ENST00000439176 BBXQ8WY36 941 aaPredicted RBP9.11□□□□□ -0.95
ERCC8-203ENST00000439176 TEX13AQ9BXU3 409 aaPredicted RBP9.11□□□□□ -0.95
ERCC8-203ENST00000439176 SRP68Q9UHB9 627 aaKnown RBP9.11□□□□□ -0.95
ERCC8-203ENST00000439176 NUDCQ9Y266 331 aa9.11□□□□□ -0.95
ERCC8-203ENST00000439176 C10orf71Q711Q0 1435 aa9.11□□□□□ -0.95
ERCC8-203ENST00000439176 COL5A3P25940 1745 aaPredicted RBP9.11□□□□□ -0.95
ERCC8-203ENST00000439176 SCN11AQ9UI33 1791 aa9.1□□□□□ -0.95
ERCC8-203ENST00000439176 A0A087WZG4 1122 aa9.1□□□□□ -0.95
ERCC8-203ENST00000439176 GNAT3A8MTJ3 354 aa9.1□□□□□ -0.95
ERCC8-203ENST00000439176 PPP1R37O75864 691 aa9.1□□□□□ -0.95
ERCC8-203ENST00000439176 USPL1Q5W0Q7 1092 aa9.1□□□□□ -0.95
ERCC8-203ENST00000439176 MICALL2Q8IY33 904 aa9.1□□□□□ -0.95
ERCC8-203ENST00000439176 ADCY9O60503 1353 aa9.1□□□□□ -0.95
ERCC8-203ENST00000439176 SOS1Q07889 1333 aaPredicted RBP9.09□□□□□ -0.95
ERCC8-203ENST00000439176 C4AP0C0L4 1744 aa9.09□□□□□ -0.95
ERCC8-203ENST00000439176 CYP19A1P11511 503 aaPredicted RBP9.09□□□□□ -0.95
ERCC8-203ENST00000439176 VARS2Q5ST30 1063 aaKnown RBP9.09□□□□□ -0.95
ERCC8-203ENST00000439176 RYDENQ9NUL5 291 aaKnown RBP9.09□□□□□ -0.95
ERCC8-203ENST00000439176 NARFQ9UHQ1 456 aa9.09□□□□□ -0.95
ERCC8-203ENST00000439176 MYH14Q7Z406 1995 aaKnown RBP9.09□□□□□ -0.95
ERCC8-203ENST00000439176 POLRMTO00411 1230 aaKnown RBP9.08□□□□□ -0.96
ERCC8-203ENST00000439176 CANXP27824 592 aaKnown RBP9.08□□□□□ -0.96
ERCC8-203ENST00000439176 TM4SF1P30408 202 aa9.08□□□□□ -0.96
ERCC8-203ENST00000439176 COL15A1P39059 1388 aa9.08□□□□□ -0.96
ERCC8-203ENST00000439176 MRC1P22897 1456 aa9.08□□□□□ -0.96
ERCC8-203ENST00000439176 KIF13BQ9NQT8 1826 aa9.08□□□□□ -0.96
ERCC8-203ENST00000439176 NEFMP07197 916 aa9.07□□□□□ -0.96
ERCC8-203ENST00000439176 HSPA6P17066 643 aa9.07□□□□□ -0.96
ERCC8-203ENST00000439176 DDR1Q08345 913 aa9.07□□□□□ -0.96
ERCC8-203ENST00000439176 DOK7Q18PE1 504 aa9.07□□□□□ -0.96
ERCC8-203ENST00000439176 ZNF790Q6PG37 636 aa9.07□□□□□ -0.96
ERCC8-203ENST00000439176 C16orf71Q8IYS4 520 aaPredicted RBP9.07□□□□□ -0.96
ERCC8-203ENST00000439176 RTF1Q92541 710 aaKnown RBP9.07□□□□□ -0.96
ERCC8-203ENST00000439176 FMNL2Q96PY5 1086 aa9.07□□□□□ -0.96
ERCC8-203ENST00000439176 ZBTB1Q9Y2K1 713 aa9.07□□□□□ -0.96
ERCC8-203ENST00000439176 N4BP2Q86UW6 1770 aaPredicted RBP9.07□□□□□ -0.96
ERCC8-203ENST00000439176 BTBD11A6QL63 1104 aa9.06□□□□□ -0.96
ERCC8-203ENST00000439176 G3V3G9 751 aa9.06□□□□□ -0.96
ERCC8-203ENST00000439176 NPHP1O15259 732 aa9.06□□□□□ -0.96
ERCC8-203ENST00000439176 TOMM70O94826 608 aa9.06□□□□□ -0.96
ERCC8-203ENST00000439176 SERPINB2P05120 415 aa9.06□□□□□ -0.96
ERCC8-203ENST00000439176 U2AF1L5P0DN76 240 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-203ENST00000439176 KCNA3P22001 575 aa9.06□□□□□ -0.96
ERCC8-203ENST00000439176 PRKAR2BP31323 418 aa9.06□□□□□ -0.96
ERCC8-203ENST00000439176 U2AF1Q01081 240 aaKnown RBP eCLIP9.06□□□□□ -0.96
ERCC8-203ENST00000439176 NFIXQ14938 502 aa9.06□□□□□ -0.96
ERCC8-203ENST00000439176 C9orf131Q5VYM1 1079 aa9.06□□□□□ -0.96
ERCC8-203ENST00000439176 IL17REQ8NFR9 667 aa9.06□□□□□ -0.96
ERCC8-203ENST00000439176 PDZRN3Q9UPQ7 1066 aa9.06□□□□□ -0.96
ERCC8-203ENST00000439176 ZNF330Q9Y3S2 320 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-203ENST00000439176 KDM2BQ8NHM5 1336 aa9.05□□□□□ -0.96
ERCC8-203ENST00000439176 TJP1Q07157 1748 aa9.05□□□□□ -0.96
ERCC8-203ENST00000439176 HEG1Q9ULI3 1381 aa9.05□□□□□ -0.96
ERCC8-203ENST00000439176 H0YIN7 160 aa9.05□□□□□ -0.96
ERCC8-203ENST00000439176 KIF3CO14782 793 aa9.05□□□□□ -0.96
ERCC8-203ENST00000439176 CHRNA5P30532 468 aa9.05□□□□□ -0.96
ERCC8-203ENST00000439176 IL6STP40189 918 aaPredicted RBP9.05□□□□□ -0.96
ERCC8-203ENST00000439176 EIF5P55010 431 aaKnown RBP9.05□□□□□ -0.96
ERCC8-203ENST00000439176 ZNF496Q96IT1 587 aaPredicted RBP9.05□□□□□ -0.96
ERCC8-203ENST00000439176 PDE6BP35913 854 aa9.04□□□□□ -0.96
ERCC8-203ENST00000439176 BICDL1Q6ZP65 573 aa9.04□□□□□ -0.96
ERCC8-203ENST00000439176 C2CD5Q86YS7 1000 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms