RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 ABCF2Q9UG63 623 aa13□□□□□ -0.33
SEMA4D-211ENST00000438547 PIK3R4Q99570 1358 aa13□□□□□ -0.33
SEMA4D-211ENST00000438547 NAPBQ9H115 298 aa13□□□□□ -0.33
SEMA4D-211ENST00000438547 A0A087WZG4 1122 aa12.99□□□□□ -0.33
SEMA4D-211ENST00000438547 PTCD1O75127 700 aaKnown RBP12.99□□□□□ -0.33
SEMA4D-211ENST00000438547 MAP3K2Q9Y2U5 619 aa12.99□□□□□ -0.33
SEMA4D-211ENST00000438547 PAXBP1Q9Y5B6 917 aa12.99□□□□□ -0.33
SEMA4D-211ENST00000438547 SPDYE4A6NLX3 237 aa12.99□□□□□ -0.33
SEMA4D-211ENST00000438547 JAKMIP3Q5VZ66 844 aa12.99□□□□□ -0.33
SEMA4D-211ENST00000438547 SNW1Q13573 536 aaKnown RBP12.99□□□□□ -0.33
SEMA4D-211ENST00000438547 CCDC82Q8N4S0 544 aa12.99□□□□□ -0.33
SEMA4D-211ENST00000438547 FAM200AQ8TCP9 573 aa12.99□□□□□ -0.33
SEMA4D-211ENST00000438547 ZSCAN16Q9H4T2 348 aaPredicted RBP12.99□□□□□ -0.33
SEMA4D-211ENST00000438547 PIK3C2GO75747 1445 aa12.99□□□□□ -0.33
SEMA4D-211ENST00000438547 POLR3GO15318 223 aaPredicted RBP12.99□□□□□ -0.33
SEMA4D-211ENST00000438547 HS1BP3Q53T59 392 aa12.99□□□□□ -0.33
SEMA4D-211ENST00000438547 CEP135Q66GS9 1140 aa12.99□□□□□ -0.33
SEMA4D-211ENST00000438547 VAMP4O75379 141 aa12.98□□□□□ -0.33
SEMA4D-211ENST00000438547 CD109Q6YHK3 1445 aa12.98□□□□□ -0.33
SEMA4D-211ENST00000438547 LAMC3Q9Y6N6 1575 aa12.98□□□□□ -0.33
SEMA4D-211ENST00000438547 USP16Q9Y5T5 823 aa12.98□□□□□ -0.33
SEMA4D-211ENST00000438547 CALRP27797 417 aaKnown RBP12.98□□□□□ -0.33
SEMA4D-211ENST00000438547 CCDC186Q7Z3E2 898 aa12.98□□□□□ -0.33
SEMA4D-211ENST00000438547 ZNF397Q8NF99 534 aaPredicted RBP12.98□□□□□ -0.33
SEMA4D-211ENST00000438547 RNF123Q5XPI4 1314 aa12.98□□□□□ -0.33
SEMA4D-211ENST00000438547 MINDY4BA8MYZ0 360 aa12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 IGHMBP2P38935 993 aaKnown RBP12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 TTC12Q9H892 705 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 CALCOCO1Q9P1Z2 691 aa12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 ORC3Q9UBD5 711 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 GOLIM4O00461 696 aa12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 USP8P40818 1118 aa12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 ATP8B2P98198 1209 aa12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 CPLX3Q8WVH0 158 aa12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 CARD14Q9BXL6 1004 aa12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 SLC12A7Q9Y666 1083 aa12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 STARD3NLO95772 234 aa12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 ZGPATQ8N5A5 531 aaKnown RBP12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 TAF4BQ92750 862 aa12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 KDM2BQ8NHM5 1336 aa12.97□□□□□ -0.33
SEMA4D-211ENST00000438547 F13A1P00488 732 aa12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 POLR3DP05423 398 aaPredicted RBP12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 IFIT5Q13325 482 aaKnown RBP12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 SPA17Q15506 151 aa12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 MAP9Q49MG5 647 aa12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 BRF1Q92994 677 aa12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 TCEANC2Q96MN5 208 aa12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 ANXA1P04083 346 aa12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 ANO6Q4KMQ2 910 aa12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 PLEKHM2Q8IWE5 1019 aa12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 GOLGA8AA7E2F4 631 aa12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 PPFIA3O75145 1194 aa12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 DNM1Q05193 864 aaKnown RBP12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 BMS1Q14692 1282 aaKnown RBP12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 TSPYL6Q8N831 410 aa12.96□□□□□ -0.33
SEMA4D-211ENST00000438547 IFIT3O14879 490 aaKnown RBP12.96□□□□□ -0.34
SEMA4D-211ENST00000438547 DACT1Q9NYF0 836 aa12.96□□□□□ -0.34
SEMA4D-211ENST00000438547 RBM8AQ9Y5S9 174 aaKnown RBP12.96□□□□□ -0.34
SEMA4D-211ENST00000438547 URB2Q14146 1524 aaKnown RBP12.96□□□□□ -0.34
SEMA4D-211ENST00000438547 MAP3K12Q12852 859 aa12.95□□□□□ -0.34
SEMA4D-211ENST00000438547 CCDC150Q8NCX0 1101 aa12.95□□□□□ -0.34
SEMA4D-211ENST00000438547 PHAXQ9H814 394 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-211ENST00000438547 PHF8Q9UPP1 1060 aa12.95□□□□□ -0.34
SEMA4D-211ENST00000438547 AMOTL2Q9Y2J4 779 aa12.95□□□□□ -0.34
SEMA4D-211ENST00000438547 CCDC171Q6TFL3 1326 aa12.95□□□□□ -0.34
SEMA4D-211ENST00000438547 GOLGA6L9A6NEM1 432 aa12.95□□□□□ -0.34
SEMA4D-211ENST00000438547 SSRP1Q08945 709 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-211ENST00000438547 IARSP41252 1262 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-211ENST00000438547 ISM2Q6H9L7 571 aa12.95□□□□□ -0.34
SEMA4D-211ENST00000438547 CEP85Q6P2H3 762 aa12.95□□□□□ -0.34
SEMA4D-211ENST00000438547 SKILP12757 684 aa12.95□□□□□ -0.34
SEMA4D-211ENST00000438547 TCOF1Q13428 1488 aaKnown RBP12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 HSP90AB3PQ58FF7 597 aa12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 CTCFLQ8NI51 663 aaPredicted RBP12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 TMX1Q9H3N1 280 aa12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 POLKQ9UBT6 870 aa12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 GOLGA6L7A0A1B0GV03 622 aa12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 CCDC102BQ68D86 513 aa12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 UBE3BQ7Z3V4 1068 aa12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 USP26Q9BXU7 913 aa12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 ACEP12821 1306 aa12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 MCM3P25205 808 aa12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 RBM25P49756 843 aaKnown RBP12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 HAND2P61296 217 aa12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 FKBP15Q5T1M5 1219 aa12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 INTS4Q96HW7 963 aaKnown RBP12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 NUP88Q99567 741 aaPredicted RBP12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 SNRKQ9NRH2 765 aa12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 GTF2F1P35269 517 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 GNG11P61952 73 aa12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 TAX1BP1Q86VP1 789 aa12.94□□□□□ -0.34
SEMA4D-211ENST00000438547 NEFHP12036 1026 aa12.93□□□□□ -0.34
SEMA4D-211ENST00000438547 YEATS4O95619 227 aa12.93□□□□□ -0.34
SEMA4D-211ENST00000438547 IQCA1Q86XH1 822 aa12.93□□□□□ -0.34
SEMA4D-211ENST00000438547 TRERF1Q96PN7 1200 aa12.93□□□□□ -0.34
SEMA4D-211ENST00000438547 RNF41Q9H4P4 317 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-211ENST00000438547 RRAGDQ9NQL2 400 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-211ENST00000438547 PUS7Q96PZ0 661 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 SHTN1A0MZ66 631 aa12.92□□□□□ -0.34
SEMA4D-211ENST00000438547 ATP5J2-PTCD1G3V325 749 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms