RNA–Protein interactions for RNA: ENST00000437974.5

ARHGEF28-204, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGEF28, Length 5,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-204ENST00000437974 TRIM27P14373 513 aa21.21■□□□□ 0.99
ARHGEF28-204ENST00000437974 FGFR1OPO95684 399 aaKnown RBP21.21■□□□□ 0.99
ARHGEF28-204ENST00000437974 GBP2P32456 591 aaPredicted RBP21.21■□□□□ 0.99
ARHGEF28-204ENST00000437974 KIF5BP33176 963 aa21.2■□□□□ 0.98
ARHGEF28-204ENST00000437974 GOLIM4O00461 696 aa21.2■□□□□ 0.98
ARHGEF28-204ENST00000437974 ARHGAP29Q52LW3 1261 aa21.2■□□□□ 0.98
ARHGEF28-204ENST00000437974 TAX1BP1Q86VP1 789 aa21.2■□□□□ 0.98
ARHGEF28-204ENST00000437974 C14orf93Q9H972 538 aaKnown RBP21.2■□□□□ 0.98
ARHGEF28-204ENST00000437974 CCDC152Q4G0S7 254 aa21.2■□□□□ 0.98
ARHGEF28-204ENST00000437974 CENPHQ9H3R5 247 aa21.2■□□□□ 0.98
ARHGEF28-204ENST00000437974 DISP3Q9P2K9 1392 aa21.2■□□□□ 0.98
ARHGEF28-204ENST00000437974 TBC1D2Q9BYX2 928 aa21.2■□□□□ 0.98
ARHGEF28-204ENST00000437974 EZRP15311 586 aaKnown RBP21.19■□□□□ 0.98
ARHGEF28-204ENST00000437974 UBE3BQ7Z3V4 1068 aa21.19■□□□□ 0.98
ARHGEF28-204ENST00000437974 SCAND2PQ9GZW5 306 aaPredicted RBP21.19■□□□□ 0.98
ARHGEF28-204ENST00000437974 LEKR1Q6ZMV7 388 aa21.19■□□□□ 0.98
ARHGEF28-204ENST00000437974 ECHDC1Q9NTX5 307 aa21.19■□□□□ 0.98
ARHGEF28-204ENST00000437974 SSFA2P28290 1259 aa21.19■□□□□ 0.98
ARHGEF28-204ENST00000437974 GSTO1P78417 241 aa21.19■□□□□ 0.98
ARHGEF28-204ENST00000437974 SPA17Q15506 151 aa21.19■□□□□ 0.98
ARHGEF28-204ENST00000437974 RPRD2Q5VT52 1461 aaKnown RBP21.19■□□□□ 0.98
ARHGEF28-204ENST00000437974 TSPY2A6NKD2 308 aa21.19■□□□□ 0.98
ARHGEF28-204ENST00000437974 KLHL10Q6JEL2 608 aa21.19■□□□□ 0.98
ARHGEF28-204ENST00000437974 PIK3R4Q99570 1358 aa21.18■□□□□ 0.98
ARHGEF28-204ENST00000437974 VPS36Q86VN1 386 aa21.18■□□□□ 0.98
ARHGEF28-204ENST00000437974 KAT14Q9H8E8 782 aa21.18■□□□□ 0.98
ARHGEF28-204ENST00000437974 GUCY1B3Q02153 619 aa21.18■□□□□ 0.98
ARHGEF28-204ENST00000437974 CACNA2D4Q7Z3S7 1137 aa21.18■□□□□ 0.98
ARHGEF28-204ENST00000437974 ZCRB1Q8TBF4 217 aaKnown RBP21.18■□□□□ 0.98
ARHGEF28-204ENST00000437974 SCAF11Q99590 1463 aaKnown RBP21.18■□□□□ 0.98
ARHGEF28-204ENST00000437974 SNRKQ9NRH2 765 aa21.17■□□□□ 0.98
ARHGEF28-204ENST00000437974 CCDC66A2RUB6 948 aa21.17■□□□□ 0.98
ARHGEF28-204ENST00000437974 UQCRFS1P1P0C7P4 283 aa21.17■□□□□ 0.98
ARHGEF28-204ENST00000437974 NPHP3Q7Z494 1330 aa21.17■□□□□ 0.98
ARHGEF28-204ENST00000437974 MPHOSPH6Q99547 160 aaKnown RBP21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 ANO10Q9NW15 660 aa21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 SPDYE4A6NLX3 237 aa21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 CCDC97Q96F63 343 aaPredicted RBP21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 VAT1LQ9HCJ6 419 aa21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 PI4KAP2A4QPH2 592 aa21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 EIF3JO75822 258 aaKnown RBP21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 LIG1P18858 919 aa21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 PI4KAP1Q8N8J0 262 aa21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 DHX29Q7Z478 1369 aaKnown RBP21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 TMEM67Q5HYA8 995 aa21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 CCDC148Q8NFR7 591 aa21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 SETDB2Q96T68 719 aa21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 ANKRD13DQ6ZTN6 518 aa21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 TNPO1Q92973 898 aaKnown RBP21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 CRNKL1Q9BZJ0 848 aaKnown RBP21.16■□□□□ 0.98
ARHGEF28-204ENST00000437974 MFSD6Q6ZSS7 791 aa21.15■□□□□ 0.98
ARHGEF28-204ENST00000437974 ATP6V1AP38606 617 aa21.15■□□□□ 0.98
ARHGEF28-204ENST00000437974 IGHDP01880 384 aa21.15■□□□□ 0.98
ARHGEF28-204ENST00000437974 ZSCAN30Q86W11 494 aa21.15■□□□□ 0.98
ARHGEF28-204ENST00000437974 LIMCH1Q9UPQ0 1083 aa21.15■□□□□ 0.98
ARHGEF28-204ENST00000437974 SMARCC1Q92922 1105 aaPredicted RBP21.15■□□□□ 0.98
ARHGEF28-204ENST00000437974 CALML4Q96GE6 196 aa21.14■□□□□ 0.98
ARHGEF28-204ENST00000437974 HDAC9Q9UKV0 1011 aa21.14■□□□□ 0.98
ARHGEF28-204ENST00000437974 PLEKHH1Q9ULM0 1364 aa21.14■□□□□ 0.97
ARHGEF28-204ENST00000437974 CCT2P78371 535 aaKnown RBP21.14■□□□□ 0.97
ARHGEF28-204ENST00000437974 CCDC183Q5T5S1 534 aa21.14■□□□□ 0.97
ARHGEF28-204ENST00000437974 ACSBG1Q96GR2 724 aa21.14■□□□□ 0.97
ARHGEF28-204ENST00000437974 ANAPC15P60006 121 aa21.14■□□□□ 0.97
ARHGEF28-204ENST00000437974 TCP11L1Q9NUJ3 509 aa21.13■□□□□ 0.97
ARHGEF28-204ENST00000437974 TTC21AQ8NDW8 1320 aa21.13■□□□□ 0.97
ARHGEF28-204ENST00000437974 IARSP41252 1262 aaKnown RBP21.13■□□□□ 0.97
ARHGEF28-204ENST00000437974 AMPD3Q01432 767 aa21.12■□□□□ 0.97
ARHGEF28-204ENST00000437974 CETN1Q12798 172 aa21.12■□□□□ 0.97
ARHGEF28-204ENST00000437974 LARP6Q9BRS8 491 aaKnown RBP21.12■□□□□ 0.97
ARHGEF28-204ENST00000437974 FAM193AP78312 1265 aa21.12■□□□□ 0.97
ARHGEF28-204ENST00000437974 C8orf37Q96NL8 207 aa21.12■□□□□ 0.97
ARHGEF28-204ENST00000437974 TBC1D9Q6ZT07 1266 aa21.12■□□□□ 0.97
ARHGEF28-204ENST00000437974 CNNM3Q8NE01 707 aa21.12■□□□□ 0.97
ARHGEF28-204ENST00000437974 MBIPQ9NS73 344 aa21.12■□□□□ 0.97
ARHGEF28-204ENST00000437974 USP16Q9Y5T5 823 aa21.12■□□□□ 0.97
ARHGEF28-204ENST00000437974 SAMM50Q9Y512 469 aa21.11■□□□□ 0.97
ARHGEF28-204ENST00000437974 ANKRD36BQ8N2N9 1353 aa21.11■□□□□ 0.97
ARHGEF28-204ENST00000437974 GOLGA6L7A0A1B0GV03 622 aa21.11■□□□□ 0.97
ARHGEF28-204ENST00000437974 STXBP4Q6ZWJ1 553 aa21.11■□□□□ 0.97
ARHGEF28-204ENST00000437974 ZGPATQ8N5A5 531 aaKnown RBP21.11■□□□□ 0.97
ARHGEF28-204ENST00000437974 SLC4A8Q2Y0W8 1093 aa21.11■□□□□ 0.97
ARHGEF28-204ENST00000437974 NCOA7Q8NI08 942 aa21.11■□□□□ 0.97
ARHGEF28-204ENST00000437974 NLRP3Q96P20 1036 aa21.1■□□□□ 0.97
ARHGEF28-204ENST00000437974 FAM83GA6ND36 823 aa21.1■□□□□ 0.97
ARHGEF28-204ENST00000437974 DDB1Q16531 1140 aa21.1■□□□□ 0.97
ARHGEF28-204ENST00000437974 TRMT1LQ7Z2T5 733 aaKnown RBP21.1■□□□□ 0.97
ARHGEF28-204ENST00000437974 KIAA0754O94854 1291 aa21.1■□□□□ 0.97
ARHGEF28-204ENST00000437974 SFPQP23246 707 aaKnown RBP eCLIP21.1■□□□□ 0.97
ARHGEF28-204ENST00000437974 JARID2Q92833 1246 aaPredicted RBP21.1■□□□□ 0.97
ARHGEF28-204ENST00000437974 CCDC144CPQ8IYA2 1237 aa21.1■□□□□ 0.97
ARHGEF28-204ENST00000437974 HAND2P61296 217 aa21.09■□□□□ 0.97
ARHGEF28-204ENST00000437974 PPM1FP49593 454 aaPredicted RBP21.09■□□□□ 0.97
ARHGEF28-204ENST00000437974 OGFOD1Q8N543 542 aa21.09■□□□□ 0.97
ARHGEF28-204ENST00000437974 CTAGE5O15320 804 aa21.09■□□□□ 0.97
ARHGEF28-204ENST00000437974 METAP2P50579 478 aaKnown RBP eCLIP21.08■□□□□ 0.97
ARHGEF28-204ENST00000437974 DRC1Q96MC2 740 aa21.08■□□□□ 0.97
ARHGEF28-204ENST00000437974 PPP4R3BQ5MIZ7 849 aa21.08■□□□□ 0.96
ARHGEF28-204ENST00000437974 MICU3Q86XE3 530 aa21.08■□□□□ 0.96
ARHGEF28-204ENST00000437974 ZSCAN12O43309 604 aa21.07■□□□□ 0.96
ARHGEF28-204ENST00000437974 ANXA1P04083 346 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms