RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 SCN7AQ01118 1682 aa21.42■■□□□ 1.02
CALD1-209ENST00000436461 NUP98P52948 1817 aa21.42■■□□□ 1.02
CALD1-209ENST00000436461 RFC4P35249 363 aa21.42■■□□□ 1.02
CALD1-209ENST00000436461 BRPF1P55201 1214 aaPredicted RBP21.42■■□□□ 1.02
CALD1-209ENST00000436461 KIF6Q6ZMV9 814 aa21.42■■□□□ 1.02
CALD1-209ENST00000436461 ADCY9O60503 1353 aa21.42■■□□□ 1.02
CALD1-209ENST00000436461 PI4KAP2A4QPH2 592 aa21.41■■□□□ 1.02
CALD1-209ENST00000436461 CAMTA2O94983 1202 aa21.41■■□□□ 1.02
CALD1-209ENST00000436461 R3HDM1Q15032 1099 aaKnown RBP21.41■■□□□ 1.02
CALD1-209ENST00000436461 HLFQ16534 295 aa21.41■■□□□ 1.02
CALD1-209ENST00000436461 USPL1Q5W0Q7 1092 aa21.41■■□□□ 1.02
CALD1-209ENST00000436461 PI4KAP1Q8N8J0 262 aa21.41■■□□□ 1.02
CALD1-209ENST00000436461 KIF16BQ96L93 1317 aa21.41■■□□□ 1.02
CALD1-209ENST00000436461 MAP3K15Q6ZN16 1313 aa21.4■■□□□ 1.02
CALD1-209ENST00000436461 PSDA5PKW4 1024 aaPredicted RBP21.4■■□□□ 1.02
CALD1-209ENST00000436461 ANKRD13DQ6ZTN6 518 aa21.4■■□□□ 1.02
CALD1-209ENST00000436461 RIC3Q7Z5B4 369 aa21.4■■□□□ 1.02
CALD1-209ENST00000436461 SUPT16HQ9Y5B9 1047 aaKnown RBP21.4■■□□□ 1.02
CALD1-209ENST00000436461 A0A087WZG4 1122 aa21.4■■□□□ 1.02
CALD1-209ENST00000436461 ADRA2BP18089 450 aa21.4■■□□□ 1.02
CALD1-209ENST00000436461 MAP3K2Q9Y2U5 619 aa21.4■■□□□ 1.02
CALD1-209ENST00000436461 PTPRCP08575 1304 aa21.39■■□□□ 1.01
CALD1-209ENST00000436461 USP42Q9H9J4 1324 aaKnown RBP21.39■■□□□ 1.01
CALD1-209ENST00000436461 CLUAP1Q96AJ1 413 aa21.39■■□□□ 1.01
CALD1-209ENST00000436461 BCL2L12Q9HB09 334 aa21.39■■□□□ 1.01
CALD1-209ENST00000436461 NARFQ9UHQ1 456 aa21.39■■□□□ 1.01
CALD1-209ENST00000436461 ZPR1O75312 459 aa21.38■■□□□ 1.01
CALD1-209ENST00000436461 DDX58O95786 925 aaKnown RBP21.38■■□□□ 1.01
CALD1-209ENST00000436461 TRIM27P14373 513 aa21.38■■□□□ 1.01
CALD1-209ENST00000436461 KSR2Q6VAB6 950 aa21.38■■□□□ 1.01
CALD1-209ENST00000436461 PLBD2Q8NHP8 589 aa21.38■■□□□ 1.01
CALD1-209ENST00000436461 ZKSCAN2Q63HK3 967 aa21.37■■□□□ 1.01
CALD1-209ENST00000436461 ANKRD36CQ5JPF3 1778 aa21.37■■□□□ 1.01
CALD1-209ENST00000436461 SLC4A10Q6U841 1118 aa21.37■■□□□ 1.01
CALD1-209ENST00000436461 ATF7IPQ6VMQ6 1270 aa21.37■■□□□ 1.01
CALD1-209ENST00000436461 RRP1P56182 461 aaKnown RBP21.36■■□□□ 1.01
CALD1-209ENST00000436461 FLAD1Q8NFF5 587 aa21.36■■□□□ 1.01
CALD1-209ENST00000436461 DNAAF4Q8WXU2 420 aa21.36■■□□□ 1.01
CALD1-209ENST00000436461 AFDNP55196 1824 aaKnown RBP21.35■■□□□ 1.01
CALD1-209ENST00000436461 GYS1P13807 737 aa21.35■■□□□ 1.01
CALD1-209ENST00000436461 FKBP8Q14318 412 aa21.35■■□□□ 1.01
CALD1-209ENST00000436461 MSL1Q68DK7 614 aa21.35■■□□□ 1.01
CALD1-209ENST00000436461 MYD88Q99836 296 aa21.35■■□□□ 1.01
CALD1-209ENST00000436461 CASZ1Q86V15 1759 aa21.35■■□□□ 1.01
CALD1-209ENST00000436461 ERVV-1B6SEH8 477 aa21.34■■□□□ 1.01
CALD1-209ENST00000436461 ATP5J2-PTCD1G3V325 749 aa21.34■■□□□ 1.01
CALD1-209ENST00000436461 IPO8O15397 1037 aaKnown RBP21.34■■□□□ 1.01
CALD1-209ENST00000436461 RLBP1P12271 317 aa21.34■■□□□ 1.01
CALD1-209ENST00000436461 GPTP24298 496 aa21.34■■□□□ 1.01
CALD1-209ENST00000436461 C20orf194Q5TEA3 1177 aa21.34■■□□□ 1.01
CALD1-209ENST00000436461 GIGYF2Q6Y7W6 1299 aaKnown RBP21.34■■□□□ 1.01
CALD1-209ENST00000436461 BICDL1Q6ZP65 573 aa21.33■■□□□ 1.01
CALD1-209ENST00000436461 PANK1Q8TE04 598 aa21.33■■□□□ 1.01
CALD1-209ENST00000436461 ARHGAP45Q92619 1136 aa21.33■■□□□ 1.01
CALD1-209ENST00000436461 API5Q9BZZ5 524 aaKnown RBP21.33■■□□□ 1.01
CALD1-209ENST00000436461 TBC1D9BQ66K14 1250 aa21.33■■□□□ 1
CALD1-209ENST00000436461 METTL22Q9BUU2 404 aaPredicted RBP21.33■■□□□ 1
CALD1-209ENST00000436461 CWF19L2Q2TBE0 894 aaKnown RBP21.32■■□□□ 1
CALD1-209ENST00000436461 ABCC4O15439 1325 aa21.31■■□□□ 1
CALD1-209ENST00000436461 IGKV5-2P06315 115 aa21.31■■□□□ 1
CALD1-209ENST00000436461 TCIRG1Q13488 830 aa21.31■■□□□ 1
CALD1-209ENST00000436461 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.31■■□□□ 1
CALD1-209ENST00000436461 ZNF652Q9Y2D9 606 aa21.31■■□□□ 1
CALD1-209ENST00000436461 UBN2Q6ZU65 1347 aa21.31■■□□□ 1
CALD1-209ENST00000436461 N4BP2Q86UW6 1770 aaPredicted RBP21.3■■□□□ 1
CALD1-209ENST00000436461 FTSJ3Q8IY81 847 aaKnown RBP21.3■■□□□ 1
CALD1-209ENST00000436461 DZIP1LQ8IYY4 767 aaKnown RBP21.3■■□□□ 1
CALD1-209ENST00000436461 NIP7Q9Y221 180 aaKnown RBP eCLIP21.3■■□□□ 1
CALD1-209ENST00000436461 RNF123Q5XPI4 1314 aa21.3■■□□□ 1
CALD1-209ENST00000436461 FAM177BA6PVY3 158 aa21.29■■□□□ 1
CALD1-209ENST00000436461 ZBTB7AO95365 584 aa21.29■■□□□ 1
CALD1-209ENST00000436461 BEND3Q5T5X7 828 aa21.29■■□□□ 1
CALD1-209ENST00000436461 TMEM57Q8N5G2 664 aa21.29■■□□□ 1
CALD1-209ENST00000436461 NFIXQ14938 502 aa21.29■■□□□ 1
CALD1-209ENST00000436461 CLEC4GQ6UXB4 293 aa21.29■■□□□ 1
CALD1-209ENST00000436461 PXDNLA1KZ92 1463 aa21.28■■□□□ 1
CALD1-209ENST00000436461 IRX6P78412 446 aaPredicted RBP21.28■■□□□ 1
CALD1-209ENST00000436461 NEXNQ0ZGT2 675 aa21.28■■□□□ 1
CALD1-209ENST00000436461 ZNF34Q8IZ26 560 aa21.28■■□□□ 1
CALD1-209ENST00000436461 ISCA1Q9BUE6 129 aa21.28■■□□□ 1
CALD1-209ENST00000436461 ATP10DQ9P241 1426 aa21.28■■□□□ 1
CALD1-209ENST00000436461 NEURL1BA8MQ27 555 aa21.27■■□□□ 1
CALD1-209ENST00000436461 HSP90AB3PQ58FF7 597 aa21.27■■□□□ 1
CALD1-209ENST00000436461 COL24A1Q17RW2 1714 aa21.27■□□□□ 0.99
CALD1-209ENST00000436461 JARID2Q92833 1246 aaPredicted RBP21.26■□□□□ 0.99
CALD1-209ENST00000436461 SRCIN1Q9C0H9 1055 aa21.26■□□□□ 0.99
CALD1-209ENST00000436461 COG6Q9Y2V7 657 aa21.26■□□□□ 0.99
CALD1-209ENST00000436461 RTL5Q5HYW3 569 aaPredicted RBP21.26■□□□□ 0.99
CALD1-209ENST00000436461 NLRP10Q86W26 655 aa21.26■□□□□ 0.99
CALD1-209ENST00000436461 LINS1Q8NG48 757 aa21.26■□□□□ 0.99
CALD1-209ENST00000436461 ATF5Q9Y2D1 282 aaPredicted RBP21.26■□□□□ 0.99
CALD1-209ENST00000436461 DDR1Q08345 913 aa21.25■□□□□ 0.99
CALD1-209ENST00000436461 SUSD4Q5VX71 490 aa21.25■□□□□ 0.99
CALD1-209ENST00000436461 ITPRIPQ8IWB1 547 aa21.25■□□□□ 0.99
CALD1-209ENST00000436461 NLGN1Q8N2Q7 840 aa21.25■□□□□ 0.99
CALD1-209ENST00000436461 SETDB2Q96T68 719 aa21.25■□□□□ 0.99
CALD1-209ENST00000436461 TM4SF1P30408 202 aa21.24■□□□□ 0.99
CALD1-209ENST00000436461 INTS3Q68E01 1043 aaKnown RBP21.24■□□□□ 0.99
CALD1-209ENST00000436461 RGL2O15211 777 aa21.23■□□□□ 0.99
CALD1-209ENST00000436461 MMP10P09238 476 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms