RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 CCDC24Q8N4L8 307 aa14.65□□□□□ -0.06
SPTLC1P4-201ENST00000435997 SETDB2Q96T68 719 aa14.65□□□□□ -0.06
SPTLC1P4-201ENST00000435997 POTECB2RU33 542 aa14.64□□□□□ -0.07
SPTLC1P4-201ENST00000435997 C21orf2O43822 256 aa14.64□□□□□ -0.07
SPTLC1P4-201ENST00000435997 VEGFAP15692 232 aaPredicted RBP14.64□□□□□ -0.07
SPTLC1P4-201ENST00000435997 PIP4K2AP48426 406 aaPredicted RBP14.64□□□□□ -0.07
SPTLC1P4-201ENST00000435997 FER1L6Q2WGJ9 1857 aa14.63□□□□□ -0.07
SPTLC1P4-201ENST00000435997 KLRG2A4D1S0 409 aaPredicted RBP14.63□□□□□ -0.07
SPTLC1P4-201ENST00000435997 NBPF26B4DH59 902 aa14.63□□□□□ -0.07
SPTLC1P4-201ENST00000435997 ST5P78524 1137 aa14.63□□□□□ -0.07
SPTLC1P4-201ENST00000435997 PRPF40BQ6NWY9 871 aaKnown RBP14.63□□□□□ -0.07
SPTLC1P4-201ENST00000435997 NBPF10Q6P3W6 841 aaKnown RBP14.63□□□□□ -0.07
SPTLC1P4-201ENST00000435997 NBPF15Q8N660 670 aa14.63□□□□□ -0.07
SPTLC1P4-201ENST00000435997 CNKSR1Q969H4 720 aa14.63□□□□□ -0.07
SPTLC1P4-201ENST00000435997 ZNF622Q969S3 477 aaKnown RBP eCLIP14.63□□□□□ -0.07
SPTLC1P4-201ENST00000435997 TAOK3Q9H2K8 898 aa14.63□□□□□ -0.07
SPTLC1P4-201ENST00000435997 RNF39Q9H2S5 420 aa14.63□□□□□ -0.07
SPTLC1P4-201ENST00000435997 DCTN1Q14203 1278 aa14.62□□□□□ -0.07
SPTLC1P4-201ENST00000435997 C7orf43Q8WVR3 580 aa14.62□□□□□ -0.07
SPTLC1P4-201ENST00000435997 RTF1Q92541 710 aaKnown RBP14.62□□□□□ -0.07
SPTLC1P4-201ENST00000435997 ARFGEF2Q9Y6D5 1785 aa14.62□□□□□ -0.07
SPTLC1P4-201ENST00000435997 ERFEQ4G0M1 354 aa14.61□□□□□ -0.07
SPTLC1P4-201ENST00000435997 SOGA3Q5TF21 947 aa14.61□□□□□ -0.07
SPTLC1P4-201ENST00000435997 NPM2Q86SE8 214 aaKnown RBP14.61□□□□□ -0.07
SPTLC1P4-201ENST00000435997 MASTLQ96GX5 879 aa14.61□□□□□ -0.07
SPTLC1P4-201ENST00000435997 ZNF652Q9Y2D9 606 aa14.61□□□□□ -0.07
SPTLC1P4-201ENST00000435997 PCNTO95613 3336 aa14.61□□□□□ -0.07
SPTLC1P4-201ENST00000435997 SNED1Q8TER0 1413 aa14.6□□□□□ -0.07
SPTLC1P4-201ENST00000435997 NBPF5PQ86XG9 351 aaPredicted RBP14.6□□□□□ -0.07
SPTLC1P4-201ENST00000435997 LAMB4A4D0S4 1761 aa14.6□□□□□ -0.07
SPTLC1P4-201ENST00000435997 TAF7Q15545 349 aaPredicted RBP14.59□□□□□ -0.07
SPTLC1P4-201ENST00000435997 DPY19L2Q6NUT2 758 aa14.59□□□□□ -0.07
SPTLC1P4-201ENST00000435997 PLEKHF1Q96S99 279 aa14.59□□□□□ -0.07
SPTLC1P4-201ENST00000435997 SLX4Q8IY92 1834 aa14.59□□□□□ -0.07
SPTLC1P4-201ENST00000435997 NPR1P16066 1061 aa14.58□□□□□ -0.08
SPTLC1P4-201ENST00000435997 ZNF219Q9P2Y4 722 aaPredicted RBP14.58□□□□□ -0.08
SPTLC1P4-201ENST00000435997 KDM3BQ7LBC6 1761 aa14.57□□□□□ -0.08
SPTLC1P4-201ENST00000435997 DICER1Q9UPY3 1922 aaKnown RBP14.57□□□□□ -0.08
SPTLC1P4-201ENST00000435997 NPHP1O15259 732 aa14.57□□□□□ -0.08
SPTLC1P4-201ENST00000435997 L3MBTL3Q96JM7 780 aaPredicted RBP14.57□□□□□ -0.08
SPTLC1P4-201ENST00000435997 NIP7Q9Y221 180 aaKnown RBP eCLIP14.57□□□□□ -0.08
SPTLC1P4-201ENST00000435997 IBTKQ9P2D0 1353 aaPredicted RBP14.57□□□□□ -0.08
SPTLC1P4-201ENST00000435997 HLFQ16534 295 aa14.56□□□□□ -0.08
SPTLC1P4-201ENST00000435997 CRY2Q49AN0 593 aa14.56□□□□□ -0.08
SPTLC1P4-201ENST00000435997 CCDC93Q567U6 631 aa14.56□□□□□ -0.08
SPTLC1P4-201ENST00000435997 ABCC12Q96J65 1359 aa14.56□□□□□ -0.08
SPTLC1P4-201ENST00000435997 RIC1Q4ADV7 1423 aa14.56□□□□□ -0.08
SPTLC1P4-201ENST00000435997 DDNO94850 711 aaPredicted RBP14.55□□□□□ -0.08
SPTLC1P4-201ENST00000435997 EIF4A1P60842 406 aaKnown RBP14.55□□□□□ -0.08
SPTLC1P4-201ENST00000435997 TPTE2Q6XPS3 522 aa14.55□□□□□ -0.08
SPTLC1P4-201ENST00000435997 MIS18AQ9NYP9 233 aa14.55□□□□□ -0.08
SPTLC1P4-201ENST00000435997 ERVV-1B6SEH8 477 aa14.54□□□□□ -0.08
SPTLC1P4-201ENST00000435997 POTEIP0CG38 1075 aa14.54□□□□□ -0.08
SPTLC1P4-201ENST00000435997 POTEJP0CG39 1038 aa14.54□□□□□ -0.08
SPTLC1P4-201ENST00000435997 FKBP4Q02790 459 aaKnown RBP eCLIP14.54□□□□□ -0.08
SPTLC1P4-201ENST00000435997 PNISRQ8TF01 805 aaKnown RBP14.54□□□□□ -0.08
SPTLC1P4-201ENST00000435997 CCDC88AQ3V6T2 1871 aa14.53□□□□□ -0.08
SPTLC1P4-201ENST00000435997 MAP3K15Q6ZN16 1313 aa14.53□□□□□ -0.08
SPTLC1P4-201ENST00000435997 NFE2L2Q16236 605 aa14.53□□□□□ -0.08
SPTLC1P4-201ENST00000435997 COL13A1Q5TAT6 717 aaPredicted RBP14.53□□□□□ -0.08
SPTLC1P4-201ENST00000435997 UBN2Q6ZU65 1347 aa14.52□□□□□ -0.08
SPTLC1P4-201ENST00000435997 PASKQ96RG2 1323 aa14.52□□□□□ -0.08
SPTLC1P4-201ENST00000435997 ZNF541Q9H0D2 1346 aa14.52□□□□□ -0.08
SPTLC1P4-201ENST00000435997 IQCA1LA6NCM1 817 aa14.52□□□□□ -0.09
SPTLC1P4-201ENST00000435997 CHADLQ6NUI6 762 aa14.52□□□□□ -0.09
SPTLC1P4-201ENST00000435997 OLFM4Q6UX06 510 aa14.52□□□□□ -0.09
SPTLC1P4-201ENST00000435997 LRP10Q7Z4F1 713 aa14.52□□□□□ -0.09
SPTLC1P4-201ENST00000435997 THUMPD2Q9BTF0 503 aaKnown RBP14.52□□□□□ -0.09
SPTLC1P4-201ENST00000435997 CREBZFQ9NS37 354 aa14.52□□□□□ -0.09
SPTLC1P4-201ENST00000435997 ERBB4Q15303 1308 aa14.51□□□□□ -0.09
SPTLC1P4-201ENST00000435997 TTLL7Q6ZT98 887 aa14.51□□□□□ -0.09
SPTLC1P4-201ENST00000435997 LDHDQ86WU2 507 aa14.51□□□□□ -0.09
SPTLC1P4-201ENST00000435997 RTKN2Q8IZC4 609 aa14.51□□□□□ -0.09
SPTLC1P4-201ENST00000435997 TAF1DQ9H5J8 278 aaPredicted RBP14.51□□□□□ -0.09
SPTLC1P4-201ENST00000435997 ZNF277Q9NRM2 450 aaPredicted RBP14.51□□□□□ -0.09
SPTLC1P4-201ENST00000435997 ADAMTSL1Q8N6G6 1762 aa14.51□□□□□ -0.09
SPTLC1P4-201ENST00000435997 COL4A5P29400 1685 aa14.5□□□□□ -0.09
SPTLC1P4-201ENST00000435997 FZD9O00144 591 aa14.5□□□□□ -0.09
SPTLC1P4-201ENST00000435997 ALDH1B1P30837 517 aa14.5□□□□□ -0.09
SPTLC1P4-201ENST00000435997 PSMD1Q99460 953 aa14.5□□□□□ -0.09
SPTLC1P4-201ENST00000435997 NYXQ9GZU5 481 aa14.5□□□□□ -0.09
SPTLC1P4-201ENST00000435997 CACNA1SQ13698 1873 aa14.5□□□□□ -0.09
SPTLC1P4-201ENST00000435997 DLG5Q8TDM6 1919 aa14.49□□□□□ -0.09
SPTLC1P4-201ENST00000435997 NEFMP07197 916 aa14.49□□□□□ -0.09
SPTLC1P4-201ENST00000435997 HSPA1AP0DMV8 641 aaKnown RBP14.49□□□□□ -0.09
SPTLC1P4-201ENST00000435997 HSPA1BP0DMV9 641 aaKnown RBP14.49□□□□□ -0.09
SPTLC1P4-201ENST00000435997 HOXA10P31260 410 aaPredicted RBP14.49□□□□□ -0.09
SPTLC1P4-201ENST00000435997 IARSP41252 1262 aaKnown RBP14.49□□□□□ -0.09
SPTLC1P4-201ENST00000435997 NUTM1Q86Y26 1132 aa14.49□□□□□ -0.09
SPTLC1P4-201ENST00000435997 SCN4AP35499 1836 aa14.48□□□□□ -0.09
SPTLC1P4-201ENST00000435997 FAM177BA6PVY3 158 aa14.48□□□□□ -0.09
SPTLC1P4-201ENST00000435997 NTSR2O95665 410 aa14.48□□□□□ -0.09
SPTLC1P4-201ENST00000435997 KIF6Q6ZMV9 814 aa14.48□□□□□ -0.09
SPTLC1P4-201ENST00000435997 ZNF34Q8IZ26 560 aa14.48□□□□□ -0.09
SPTLC1P4-201ENST00000435997 CNTNAP1P78357 1384 aa14.47□□□□□ -0.09
SPTLC1P4-201ENST00000435997 PDIA6Q15084 440 aa14.47□□□□□ -0.09
SPTLC1P4-201ENST00000435997 SUSD4Q5VX71 490 aa14.47□□□□□ -0.09
SPTLC1P4-201ENST00000435997 CC2D2BQ6DHV5 1058 aa14.47□□□□□ -0.09
SPTLC1P4-201ENST00000435997 MAPK8IP3Q9UPT6 1336 aa14.46□□□□□ -0.09
SPTLC1P4-201ENST00000435997 ITGBL1O95965 494 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms