RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 SLX4Q8IY92 1834 aa15.59■□□□□ 0.09
CHRNA1-207ENST00000435083 BTBD11A6QL63 1104 aa15.58■□□□□ 0.09
CHRNA1-207ENST00000435083 CHADLQ6NUI6 762 aa15.58■□□□□ 0.09
CHRNA1-207ENST00000435083 PRPF40BQ6NWY9 871 aaKnown RBP15.58■□□□□ 0.09
CHRNA1-207ENST00000435083 SRGNP10124 158 aa15.58■□□□□ 0.08
CHRNA1-207ENST00000435083 PIP4K2AP48426 406 aaPredicted RBP15.58■□□□□ 0.08
CHRNA1-207ENST00000435083 MASTLQ96GX5 879 aa15.58■□□□□ 0.08
CHRNA1-207ENST00000435083 POTEIP0CG38 1075 aa15.57■□□□□ 0.08
CHRNA1-207ENST00000435083 POTEJP0CG39 1038 aa15.57■□□□□ 0.08
CHRNA1-207ENST00000435083 SOGA3Q5TF21 947 aa15.57■□□□□ 0.08
CHRNA1-207ENST00000435083 MKRN1Q9UHC7 482 aaKnown RBP15.57■□□□□ 0.08
CHRNA1-207ENST00000435083 USP16Q9Y5T5 823 aa15.57■□□□□ 0.08
CHRNA1-207ENST00000435083 PRKAR2BP31323 418 aa15.56■□□□□ 0.08
CHRNA1-207ENST00000435083 PHACTR3Q96KR7 559 aa15.56■□□□□ 0.08
CHRNA1-207ENST00000435083 CEMIPQ8WUJ3 1361 aa15.55■□□□□ 0.08
CHRNA1-207ENST00000435083 NBPF5PQ86XG9 351 aaPredicted RBP15.55■□□□□ 0.08
CHRNA1-207ENST00000435083 CREBZFQ9NS37 354 aa15.55■□□□□ 0.08
CHRNA1-207ENST00000435083 BCORQ6W2J9 1755 aa15.55■□□□□ 0.08
CHRNA1-207ENST00000435083 NPC1L1Q9UHC9 1359 aa15.55■□□□□ 0.08
CHRNA1-207ENST00000435083 PRAMEF22A3QJZ6 481 aa15.54■□□□□ 0.08
CHRNA1-207ENST00000435083 ARFGEF2Q9Y6D5 1785 aa15.54■□□□□ 0.08
CHRNA1-207ENST00000435083 CCDC93Q567U6 631 aa15.53■□□□□ 0.08
CHRNA1-207ENST00000435083 CFAP53Q96M91 514 aa15.53■□□□□ 0.08
CHRNA1-207ENST00000435083 ZNF652Q9Y2D9 606 aa15.53■□□□□ 0.08
CHRNA1-207ENST00000435083 IQCA1LA6NCM1 817 aa15.53■□□□□ 0.08
CHRNA1-207ENST00000435083 SNRPA1P09661 255 aaKnown RBP15.53■□□□□ 0.08
CHRNA1-207ENST00000435083 CLEC4GQ6UXB4 293 aa15.53■□□□□ 0.08
CHRNA1-207ENST00000435083 RTF1Q92541 710 aaKnown RBP15.53■□□□□ 0.08
CHRNA1-207ENST00000435083 RSPH6AQ9H0K4 717 aa15.53■□□□□ 0.08
CHRNA1-207ENST00000435083 FAM177BA6PVY3 158 aa15.52■□□□□ 0.07
CHRNA1-207ENST00000435083 NPR1P16066 1061 aa15.52■□□□□ 0.07
CHRNA1-207ENST00000435083 C7orf43Q8WVR3 580 aa15.52■□□□□ 0.07
CHRNA1-207ENST00000435083 TPTE2Q6XPS3 522 aa15.51■□□□□ 0.07
CHRNA1-207ENST00000435083 MCM10Q7L590 875 aa15.51■□□□□ 0.07
CHRNA1-207ENST00000435083 LDHDQ86WU2 507 aa15.51■□□□□ 0.07
CHRNA1-207ENST00000435083 TAF1DQ9H5J8 278 aaPredicted RBP15.51■□□□□ 0.07
CHRNA1-207ENST00000435083 ZNF277Q9NRM2 450 aaPredicted RBP15.51■□□□□ 0.07
CHRNA1-207ENST00000435083 NIP7Q9Y221 180 aaKnown RBP eCLIP15.51■□□□□ 0.07
CHRNA1-207ENST00000435083 NUDCQ9Y266 331 aa15.51■□□□□ 0.07
CHRNA1-207ENST00000435083 FKBP4Q02790 459 aaKnown RBP eCLIP15.5■□□□□ 0.07
CHRNA1-207ENST00000435083 EAPPQ56P03 285 aaPredicted RBP15.5■□□□□ 0.07
CHRNA1-207ENST00000435083 L3MBTL3Q96JM7 780 aaPredicted RBP15.5■□□□□ 0.07
CHRNA1-207ENST00000435083 SCN4AP35499 1836 aa15.5■□□□□ 0.07
CHRNA1-207ENST00000435083 U2AF1L5P0DN76 240 aaPredicted RBP15.49■□□□□ 0.07
CHRNA1-207ENST00000435083 U2AF1Q01081 240 aaKnown RBP eCLIP15.49■□□□□ 0.07
CHRNA1-207ENST00000435083 OLFM4Q6UX06 510 aa15.49■□□□□ 0.07
CHRNA1-207ENST00000435083 CLEC11AQ9Y240 323 aa15.49■□□□□ 0.07
CHRNA1-207ENST00000435083 NBPF26B4DH59 902 aa15.49■□□□□ 0.07
CHRNA1-207ENST00000435083 DCTN1Q14203 1278 aa15.49■□□□□ 0.07
CHRNA1-207ENST00000435083 NBPF10Q6P3W6 841 aaKnown RBP15.49■□□□□ 0.07
CHRNA1-207ENST00000435083 NBPF15Q8N660 670 aa15.49■□□□□ 0.07
CHRNA1-207ENST00000435083 ZNF541Q9H0D2 1346 aa15.49■□□□□ 0.07
CHRNA1-207ENST00000435083 CNTNAP1P78357 1384 aa15.49■□□□□ 0.07
CHRNA1-207ENST00000435083 PASKQ96RG2 1323 aa15.48■□□□□ 0.07
CHRNA1-207ENST00000435083 KLRG2A4D1S0 409 aaPredicted RBP15.48■□□□□ 0.07
CHRNA1-207ENST00000435083 FOXN1O15353 648 aa15.48■□□□□ 0.07
CHRNA1-207ENST00000435083 GTF2E1P29083 439 aaPredicted RBP15.48■□□□□ 0.07
CHRNA1-207ENST00000435083 RTKN2Q8IZC4 609 aa15.48■□□□□ 0.07
CHRNA1-207ENST00000435083 HACL1Q9UJ83 578 aa15.48■□□□□ 0.07
CHRNA1-207ENST00000435083 TMEM88BA6NKF7 163 aa15.47■□□□□ 0.07
CHRNA1-207ENST00000435083 ITGBL1O95965 494 aaPredicted RBP15.46■□□□□ 0.07
CHRNA1-207ENST00000435083 ALDH1B1P30837 517 aa15.46■□□□□ 0.07
CHRNA1-207ENST00000435083 HLFQ16534 295 aa15.46■□□□□ 0.07
CHRNA1-207ENST00000435083 SYNE4Q8N205 404 aa15.46■□□□□ 0.07
CHRNA1-207ENST00000435083 EPHX2P34913 555 aa15.45■□□□□ 0.06
CHRNA1-207ENST00000435083 IARSP41252 1262 aaKnown RBP15.45■□□□□ 0.06
CHRNA1-207ENST00000435083 VEGFBP49765 207 aa15.45■□□□□ 0.06
CHRNA1-207ENST00000435083 NGEFQ8N5V2 710 aa15.45■□□□□ 0.06
CHRNA1-207ENST00000435083 AIDAQ96BJ3 306 aa15.45■□□□□ 0.06
CHRNA1-207ENST00000435083 RNF123Q5XPI4 1314 aa15.45■□□□□ 0.06
CHRNA1-207ENST00000435083 PCNTO95613 3336 aa15.45■□□□□ 0.06
CHRNA1-207ENST00000435083 RGL2O15211 777 aa15.45■□□□□ 0.06
CHRNA1-207ENST00000435083 HTATSF1O43719 755 aaKnown RBP15.45■□□□□ 0.06
CHRNA1-207ENST00000435083 TAF7Q15545 349 aaPredicted RBP15.45■□□□□ 0.06
CHRNA1-207ENST00000435083 MIS18AQ9NYP9 233 aa15.45■□□□□ 0.06
CHRNA1-207ENST00000435083 PPP2R1AP30153 589 aa15.44■□□□□ 0.06
CHRNA1-207ENST00000435083 PNMA8AQ86V59 439 aaPredicted RBP15.44■□□□□ 0.06
CHRNA1-207ENST00000435083 FZD9O00144 591 aa15.43■□□□□ 0.06
CHRNA1-207ENST00000435083 CTCFP49711 727 aaPredicted RBP15.43■□□□□ 0.06
CHRNA1-207ENST00000435083 MAP1SQ66K74 1059 aaPredicted RBP15.43■□□□□ 0.06
CHRNA1-207ENST00000435083 CNTROBQ8N137 903 aa15.43■□□□□ 0.06
CHRNA1-207ENST00000435083 JDP2Q8WYK2 163 aa15.43■□□□□ 0.06
CHRNA1-207ENST00000435083 PRDM10Q9NQV6 1147 aa15.43■□□□□ 0.06
CHRNA1-207ENST00000435083 NUTM1Q86Y26 1132 aa15.42■□□□□ 0.06
CHRNA1-207ENST00000435083 GPC2Q8N158 579 aa15.42■□□□□ 0.06
CHRNA1-207ENST00000435083 NYXQ9GZU5 481 aa15.42■□□□□ 0.06
CHRNA1-207ENST00000435083 GJA3Q9Y6H8 435 aa15.42■□□□□ 0.06
CHRNA1-207ENST00000435083 RRP7AQ9Y3A4 280 aaKnown RBP15.41■□□□□ 0.06
CHRNA1-207ENST00000435083 ADAMTSL1Q8N6G6 1762 aa15.41■□□□□ 0.06
CHRNA1-207ENST00000435083 EIF6P56537 245 aaKnown RBP15.41■□□□□ 0.06
CHRNA1-207ENST00000435083 DEFB115Q30KQ5 88 aa15.41■□□□□ 0.06
CHRNA1-207ENST00000435083 PSMD1Q99460 953 aa15.41■□□□□ 0.06
CHRNA1-207ENST00000435083 WBP1LQ9NX94 342 aa15.41■□□□□ 0.06
CHRNA1-207ENST00000435083 ABCC12Q96J65 1359 aa15.4■□□□□ 0.06
CHRNA1-207ENST00000435083 LAMB4A4D0S4 1761 aa15.4■□□□□ 0.06
CHRNA1-207ENST00000435083 NEFMP07197 916 aa15.4■□□□□ 0.06
CHRNA1-207ENST00000435083 LBX1P52954 281 aa15.4■□□□□ 0.06
CHRNA1-207ENST00000435083 CC2D2BQ6DHV5 1058 aa15.4■□□□□ 0.06
CHRNA1-207ENST00000435083 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
CHRNA1-207ENST00000435083 MAP3K15Q6ZN16 1313 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms