RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 CASQ1P31415 396 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 STK3Q13188 491 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 FAM53CQ9NYF3 392 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 TRAPPC8Q9Y2L5 1435 aa8.78□□□□□ -1
CPSF6-202ENST00000435070 NYAP1Q6ZVC0 841 aa8.77□□□□□ -1
CPSF6-202ENST00000435070 CCDC9Q9Y3X0 531 aaKnown RBP8.77□□□□□ -1
CPSF6-202ENST00000435070 EFCC1Q9HA90 598 aa8.77□□□□□ -1.01
CPSF6-202ENST00000435070 H2AFXP16104 143 aaPredicted RBP8.77□□□□□ -1.01
CPSF6-202ENST00000435070 PIK3R4Q99570 1358 aa8.77□□□□□ -1.01
CPSF6-202ENST00000435070 PTPRCP08575 1304 aa8.77□□□□□ -1.01
CPSF6-202ENST00000435070 HSPA4P34932 840 aa8.77□□□□□ -1.01
CPSF6-202ENST00000435070 NOP2P46087 812 aaKnown RBP8.77□□□□□ -1.01
CPSF6-202ENST00000435070 C11orf57Q6ZUT1 292 aaPredicted RBP8.77□□□□□ -1.01
CPSF6-202ENST00000435070 ARGLU1Q9NWB6 273 aaPredicted RBP8.77□□□□□ -1.01
CPSF6-202ENST00000435070 MYCNP04198 464 aaPredicted RBP8.77□□□□□ -1.01
CPSF6-202ENST00000435070 SETQ01105 290 aaPredicted RBP8.77□□□□□ -1.01
CPSF6-202ENST00000435070 HDAC5Q9UQL6 1122 aa8.77□□□□□ -1.01
CPSF6-202ENST00000435070 TDRD7Q8NHU6 1098 aaKnown RBP8.76□□□□□ -1.01
CPSF6-202ENST00000435070 DDX11Q96FC9 970 aa8.76□□□□□ -1.01
CPSF6-202ENST00000435070 ZNF330Q9Y3S2 320 aaPredicted RBP8.76□□□□□ -1.01
CPSF6-202ENST00000435070 ATP10DQ9P241 1426 aa8.76□□□□□ -1.01
CPSF6-202ENST00000435070 PNMA6EA0A0J9YXQ4 647 aa8.76□□□□□ -1.01
CPSF6-202ENST00000435070 G2E3Q7L622 706 aa8.76□□□□□ -1.01
CPSF6-202ENST00000435070 ADCK5Q3MIX3 580 aa8.76□□□□□ -1.01
CPSF6-202ENST00000435070 CARD6Q9BX69 1037 aa8.76□□□□□ -1.01
CPSF6-202ENST00000435070 PDRG1Q9NUG6 133 aa8.76□□□□□ -1.01
CPSF6-202ENST00000435070 SAMD9LQ8IVG5 1584 aa8.76□□□□□ -1.01
CPSF6-202ENST00000435070 RRP15Q9Y3B9 282 aaKnown RBP8.76□□□□□ -1.01
CPSF6-202ENST00000435070 EMILIN1Q9Y6C2 1016 aa8.76□□□□□ -1.01
CPSF6-202ENST00000435070 ATP10AO60312 1499 aa8.76□□□□□ -1.01
CPSF6-202ENST00000435070 ICE2Q659A1 982 aa8.76□□□□□ -1.01
CPSF6-202ENST00000435070 PRPF40BQ6NWY9 871 aaKnown RBP8.76□□□□□ -1.01
CPSF6-202ENST00000435070 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.76□□□□□ -1.012e-7■■□□□ 13
CPSF6-202ENST00000435070 UGGT1Q9NYU2 1555 aa8.76□□□□□ -1.01
CPSF6-202ENST00000435070 PPFIA3O75145 1194 aa8.75□□□□□ -1.01
CPSF6-202ENST00000435070 CCZ1BP86790 482 aa8.75□□□□□ -1.01
CPSF6-202ENST00000435070 CCZ1P86791 482 aaPredicted RBP8.75□□□□□ -1.01
CPSF6-202ENST00000435070 SLFNL1Q499Z3 407 aa8.75□□□□□ -1.01
CPSF6-202ENST00000435070 ZSWIM4Q9H7M6 989 aa8.75□□□□□ -1.01
CPSF6-202ENST00000435070 SMC1AQ14683 1233 aaKnown RBP8.75□□□□□ -1.01
CPSF6-202ENST00000435070 MCM10Q7L590 875 aa8.75□□□□□ -1.01
CPSF6-202ENST00000435070 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.75□□□□□ -1.01
CPSF6-202ENST00000435070 SMC2O95347 1197 aa8.75□□□□□ -1.01
CPSF6-202ENST00000435070 A0A1W2PP64 1363 aa8.75□□□□□ -1.01
CPSF6-202ENST00000435070 TERF2IPQ9NYB0 399 aa8.75□□□□□ -1.01
CPSF6-202ENST00000435070 VGFO15240 615 aaPredicted RBP8.75□□□□□ -1.01
CPSF6-202ENST00000435070 OSBPL3Q9H4L5 887 aa8.75□□□□□ -1.01
CPSF6-202ENST00000435070 SLC52A1Q9NWF4 448 aa8.75□□□□□ -1.01
CPSF6-202ENST00000435070 CWC15Q9P013 229 aaKnown RBP8.75□□□□□ -1.01
CPSF6-202ENST00000435070 SASH3O75995 380 aa8.75□□□□□ -1.01
CPSF6-202ENST00000435070 ME3Q16798 604 aa8.75□□□□□ -1.01
CPSF6-202ENST00000435070 PTPN21Q16825 1174 aa8.75□□□□□ -1.01
CPSF6-202ENST00000435070 ADGRL1O94910 1474 aa8.74□□□□□ -1.01
CPSF6-202ENST00000435070 IFIT2P09913 472 aaKnown RBP8.74□□□□□ -1.01
CPSF6-202ENST00000435070 CREBRFQ8IUR6 639 aa8.74□□□□□ -1.01
CPSF6-202ENST00000435070 TTC14Q96N46 770 aa8.74□□□□□ -1.01
CPSF6-202ENST00000435070 TMC6Q7Z403 805 aa8.74□□□□□ -1.01
CPSF6-202ENST00000435070 GOLGA6L1Q8N7Z2 621 aa8.74□□□□□ -1.01
CPSF6-202ENST00000435070 TMX4Q9H1E5 349 aaPredicted RBP8.74□□□□□ -1.01
CPSF6-202ENST00000435070 CLSTN2Q9H4D0 955 aa8.74□□□□□ -1.01
CPSF6-202ENST00000435070 COL9A3Q14050 684 aaPredicted RBP8.74□□□□□ -1.01
CPSF6-202ENST00000435070 RNF20Q5VTR2 975 aa8.74□□□□□ -1.01
CPSF6-202ENST00000435070 AOPEPQ8N6M6 819 aa8.74□□□□□ -1.01
CPSF6-202ENST00000435070 PLEKHA4Q9H4M7 779 aa8.74□□□□□ -1.01
CPSF6-202ENST00000435070 DDX19AQ9NUU7 478 aaKnown RBP8.74□□□□□ -1.01
CPSF6-202ENST00000435070 JRKLQ9Y4A0 524 aa8.74□□□□□ -1.01
CPSF6-202ENST00000435070 E4F1Q66K89 784 aaPredicted RBP8.74□□□□□ -1.01
CPSF6-202ENST00000435070 NOC3LQ8WTT2 800 aaKnown RBP8.74□□□□□ -1.01
CPSF6-202ENST00000435070 ARHGEF5Q12774 1597 aa8.74□□□□□ -1.01
CPSF6-202ENST00000435070 GNAI2P04899 355 aa8.74□□□□□ -1.01
CPSF6-202ENST00000435070 FOXR1Q6PIV2 292 aa8.74□□□□□ -1.01
CPSF6-202ENST00000435070 LEO1Q8WVC0 666 aaPredicted RBP8.74□□□□□ -1.01
CPSF6-202ENST00000435070 TARBP1Q13395 1621 aaKnown RBP8.73□□□□□ -1.01
CPSF6-202ENST00000435070 EVCP57679 992 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 SRLQ86TD4 932 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 SIRT1Q96EB6 747 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 PPP1R13BQ96KQ4 1090 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 AK7Q96M32 723 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 HYPKQ9NX55 129 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 ADGRB2O60241 1585 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 LARP1Q6PKG0 1096 aaKnown RBP8.73□□□□□ -1.01
CPSF6-202ENST00000435070 DHX37Q8IY37 1157 aaKnown RBP8.73□□□□□ -1.01
CPSF6-202ENST00000435070 MCM6Q14566 821 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 PGBD1Q96JS3 809 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 ORC3Q9UBD5 711 aaPredicted RBP8.73□□□□□ -1.01
CPSF6-202ENST00000435070 MAST1Q9Y2H9 1570 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 ADAM21Q9UKJ8 722 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 PHACTR2O75167 634 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 ZNF853P0CG23 659 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 TTC31Q49AM3 519 aaPredicted RBP8.73□□□□□ -1.01
CPSF6-202ENST00000435070 EFCAB2Q5VUJ9 269 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 CABP1Q9NZU7 370 aa8.73□□□□□ -1.01
CPSF6-202ENST00000435070 NEMFO60524 1076 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 SURF6O75683 361 aaKnown RBP8.72□□□□□ -1.01
CPSF6-202ENST00000435070 CYP46A1Q9Y6A2 500 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 IQGAP3Q86VI3 1631 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 UNC13BO14795 1591 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 ZRANB2O95218 330 aaKnown RBP eCLIP8.72□□□□□ -1.018e-14■■■■□ 25.2
CPSF6-202ENST00000435070 IQCB1Q15051 598 aa8.72□□□□□ -1.01
CPSF6-202ENST00000435070 MUM1L1Q5H9M0 696 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms