RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 MAPK8IP3Q9UPT6 1336 aa19.68■□□□□ 0.74
RPUSD3-208ENST00000433972 C21orf2O43822 256 aa19.67■□□□□ 0.74
RPUSD3-208ENST00000433972 TPTE2Q6XPS3 522 aa19.67■□□□□ 0.74
RPUSD3-208ENST00000433972 LTBP3Q9NS15 1303 aa19.67■□□□□ 0.74
RPUSD3-208ENST00000433972 SRGNP10124 158 aa19.66■□□□□ 0.74
RPUSD3-208ENST00000433972 TAOK3Q9H2K8 898 aa19.66■□□□□ 0.74
RPUSD3-208ENST00000433972 PRAMEF22A3QJZ6 481 aa19.65■□□□□ 0.74
RPUSD3-208ENST00000433972 PIP4K2AP48426 406 aaPredicted RBP19.65■□□□□ 0.74
RPUSD3-208ENST00000433972 CCDC24Q8N4L8 307 aa19.65■□□□□ 0.74
RPUSD3-208ENST00000433972 NIP7Q9Y221 180 aaKnown RBP eCLIP19.65■□□□□ 0.74
RPUSD3-208ENST00000433972 NFE2L2Q16236 605 aa19.64■□□□□ 0.73
RPUSD3-208ENST00000433972 ERFEQ4G0M1 354 aa19.64■□□□□ 0.73
RPUSD3-208ENST00000433972 PRPF40BQ6NWY9 871 aaKnown RBP19.64■□□□□ 0.73
RPUSD3-208ENST00000433972 BCORQ6W2J9 1755 aa19.64■□□□□ 0.73
RPUSD3-208ENST00000433972 NPR1P16066 1061 aa19.63■□□□□ 0.73
RPUSD3-208ENST00000433972 GTF2E1P29083 439 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-208ENST00000433972 ZNF219Q9P2Y4 722 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-208ENST00000433972 NBPF26B4DH59 902 aa19.62■□□□□ 0.73
RPUSD3-208ENST00000433972 PRELPP51888 382 aa19.62■□□□□ 0.73
RPUSD3-208ENST00000433972 DDX10Q13206 875 aaKnown RBP19.62■□□□□ 0.73
RPUSD3-208ENST00000433972 IFFO2Q5TF58 517 aa19.62■□□□□ 0.73
RPUSD3-208ENST00000433972 NBPF10Q6P3W6 841 aaKnown RBP19.62■□□□□ 0.73
RPUSD3-208ENST00000433972 NBPF15Q8N660 670 aa19.62■□□□□ 0.73
RPUSD3-208ENST00000433972 PLEKHF1Q96S99 279 aa19.62■□□□□ 0.73
RPUSD3-208ENST00000433972 NYXQ9GZU5 481 aa19.62■□□□□ 0.73
RPUSD3-208ENST00000433972 SBF1O95248 1867 aa19.62■□□□□ 0.73
RPUSD3-208ENST00000433972 ERVV-1B6SEH8 477 aa19.61■□□□□ 0.73
RPUSD3-208ENST00000433972 RALBP1Q15311 655 aa19.61■□□□□ 0.73
RPUSD3-208ENST00000433972 CCDC93Q567U6 631 aa19.61■□□□□ 0.73
RPUSD3-208ENST00000433972 KIF6Q6ZMV9 814 aa19.61■□□□□ 0.73
RPUSD3-208ENST00000433972 DNAJC5GQ8N7S2 189 aa19.61■□□□□ 0.73
RPUSD3-208ENST00000433972 ANKRD31Q8N7Z5 1873 aa19.6■□□□□ 0.73
RPUSD3-208ENST00000433972 KLRG2A4D1S0 409 aaPredicted RBP19.6■□□□□ 0.73
RPUSD3-208ENST00000433972 MIS18AQ9NYP9 233 aa19.6■□□□□ 0.73
RPUSD3-208ENST00000433972 ERBB4Q15303 1308 aa19.59■□□□□ 0.73
RPUSD3-208ENST00000433972 ALDH1B1P30837 517 aa19.59■□□□□ 0.73
RPUSD3-208ENST00000433972 EIF4A1P60842 406 aaKnown RBP19.59■□□□□ 0.73
RPUSD3-208ENST00000433972 LMOD3Q0VAK6 560 aa19.59■□□□□ 0.73
RPUSD3-208ENST00000433972 KLRG1Q96E93 195 aa19.59■□□□□ 0.73
RPUSD3-208ENST00000433972 COL11A2P13942 1736 aaPredicted RBP19.59■□□□□ 0.73
RPUSD3-208ENST00000433972 TIAM2Q8IVF5 1701 aa19.59■□□□□ 0.73
RPUSD3-208ENST00000433972 MAP3K15Q6ZN16 1313 aa19.57■□□□□ 0.72
RPUSD3-208ENST00000433972 WDR90Q96KV7 1748 aa19.57■□□□□ 0.72
RPUSD3-208ENST00000433972 ZNF316A6NFI3 1004 aaPredicted RBP19.57■□□□□ 0.72
RPUSD3-208ENST00000433972 RTKN2Q8IZC4 609 aa19.57■□□□□ 0.72
RPUSD3-208ENST00000433972 BABAM1Q9NWV8 329 aa19.57■□□□□ 0.72
RPUSD3-208ENST00000433972 LAMB4A4D0S4 1761 aa19.57■□□□□ 0.72
RPUSD3-208ENST00000433972 IQCA1LA6NCM1 817 aa19.56■□□□□ 0.72
RPUSD3-208ENST00000433972 TSPYL4Q9UJ04 414 aa19.56■□□□□ 0.72
RPUSD3-208ENST00000433972 RRP7AQ9Y3A4 280 aaKnown RBP19.56■□□□□ 0.72
RPUSD3-208ENST00000433972 FAM177BA6PVY3 158 aa19.55■□□□□ 0.72
RPUSD3-208ENST00000433972 FKBP4Q02790 459 aaKnown RBP eCLIP19.55■□□□□ 0.72
RPUSD3-208ENST00000433972 HLFQ16534 295 aa19.55■□□□□ 0.72
RPUSD3-208ENST00000433972 NGEFQ8N5V2 710 aa19.55■□□□□ 0.72
RPUSD3-208ENST00000433972 C7orf43Q8WVR3 580 aa19.55■□□□□ 0.72
RPUSD3-208ENST00000433972 IBTKQ9P2D0 1353 aaPredicted RBP19.55■□□□□ 0.72
RPUSD3-208ENST00000433972 JMYQ8N9B5 988 aa19.54■□□□□ 0.72
RPUSD3-208ENST00000433972 KDM3BQ7LBC6 1761 aa19.54■□□□□ 0.72
RPUSD3-208ENST00000433972 FER1L6Q2WGJ9 1857 aa19.54■□□□□ 0.72
RPUSD3-208ENST00000433972 ARFGEF2Q9Y6D5 1785 aa19.53■□□□□ 0.72
RPUSD3-208ENST00000433972 MYL6BP14649 208 aa19.53■□□□□ 0.72
RPUSD3-208ENST00000433972 RIPK4P57078 832 aa19.53■□□□□ 0.72
RPUSD3-208ENST00000433972 GRIPAP1Q4V328 841 aa19.53■□□□□ 0.72
RPUSD3-208ENST00000433972 CC2D2BQ6DHV5 1058 aa19.53■□□□□ 0.72
RPUSD3-208ENST00000433972 THUMPD2Q9BTF0 503 aaKnown RBP19.53■□□□□ 0.72
RPUSD3-208ENST00000433972 RIC1Q4ADV7 1423 aa19.51■□□□□ 0.71
RPUSD3-208ENST00000433972 POTECB2RU33 542 aa19.51■□□□□ 0.71
RPUSD3-208ENST00000433972 HTRA3P83110 453 aa19.51■□□□□ 0.71
RPUSD3-208ENST00000433972 CRY2Q49AN0 593 aa19.51■□□□□ 0.71
RPUSD3-208ENST00000433972 PARP10Q53GL7 1025 aa19.51■□□□□ 0.71
RPUSD3-208ENST00000433972 PPP1R42Q7Z4L9 355 aa19.51■□□□□ 0.71
RPUSD3-208ENST00000433972 RPGRQ92834 1020 aaKnown RBP19.51■□□□□ 0.71
RPUSD3-208ENST00000433972 MYBBP1AQ9BQG0 1328 aaKnown RBP19.51■□□□□ 0.71
RPUSD3-208ENST00000433972 DDNO94850 711 aaPredicted RBP19.5■□□□□ 0.71
RPUSD3-208ENST00000433972 GIGYF2Q6Y7W6 1299 aaKnown RBP19.5■□□□□ 0.71
RPUSD3-208ENST00000433972 TTLL7Q6ZT98 887 aa19.5■□□□□ 0.71
RPUSD3-208ENST00000433972 L3MBTL3Q96JM7 780 aaPredicted RBP19.5■□□□□ 0.71
RPUSD3-208ENST00000433972 ZBTB3Q9H5J0 574 aa19.5■□□□□ 0.71
RPUSD3-208ENST00000433972 SLX4Q8IY92 1834 aa19.5■□□□□ 0.71
RPUSD3-208ENST00000433972 CHADLQ6NUI6 762 aa19.49■□□□□ 0.71
RPUSD3-208ENST00000433972 PSMD1Q99460 953 aa19.49■□□□□ 0.71
RPUSD3-208ENST00000433972 TMX4Q9H1E5 349 aaPredicted RBP19.49■□□□□ 0.71
RPUSD3-208ENST00000433972 TMPOP42166 694 aaKnown RBP19.48■□□□□ 0.71
RPUSD3-208ENST00000433972 NUTM1Q86Y26 1132 aa19.48■□□□□ 0.71
RPUSD3-208ENST00000433972 JDP2Q8WYK2 163 aa19.48■□□□□ 0.71
RPUSD3-208ENST00000433972 ZNF277Q9NRM2 450 aaPredicted RBP19.48■□□□□ 0.71
RPUSD3-208ENST00000433972 DICER1Q9UPY3 1922 aaKnown RBP19.48■□□□□ 0.71
RPUSD3-208ENST00000433972 DLG5Q8TDM6 1919 aa19.47■□□□□ 0.71
RPUSD3-208ENST00000433972 ABCC12Q96J65 1359 aa19.47■□□□□ 0.71
RPUSD3-208ENST00000433972 GPTP24298 496 aa19.47■□□□□ 0.71
RPUSD3-208ENST00000433972 HOXA10P31260 410 aaPredicted RBP19.47■□□□□ 0.71
RPUSD3-208ENST00000433972 IARSP41252 1262 aaKnown RBP19.47■□□□□ 0.71
RPUSD3-208ENST00000433972 WDR43Q15061 677 aaKnown RBP eCLIP19.47■□□□□ 0.71
RPUSD3-208ENST00000433972 HSP90AB3PQ58FF7 597 aa19.47■□□□□ 0.71
RPUSD3-208ENST00000433972 LDHDQ86WU2 507 aa19.47■□□□□ 0.71
RPUSD3-208ENST00000433972 ZNF34Q8IZ26 560 aa19.47■□□□□ 0.71
RPUSD3-208ENST00000433972 RBM17Q96I25 401 aaKnown RBP19.47■□□□□ 0.71
RPUSD3-208ENST00000433972 RNF123Q5XPI4 1314 aa19.47■□□□□ 0.71
RPUSD3-208ENST00000433972 CCDC88AQ3V6T2 1871 aa19.46■□□□□ 0.71
RPUSD3-208ENST00000433972 EIF2S2P20042 333 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms