RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 LMBRD1Q9NUN5 540 aa9.42□□□□□ -0.9
CNKSR3-202ENST00000433165 KIF16BQ96L93 1317 aa9.41□□□□□ -0.9
CNKSR3-202ENST00000433165 C5P01031 1676 aa9.41□□□□□ -0.9
CNKSR3-202ENST00000433165 TOGARAM1Q9Y4F4 1720 aa9.41□□□□□ -0.9
CNKSR3-202ENST00000433165 CT47B1P0C2W7 299 aaPredicted RBP9.41□□□□□ -0.9
CNKSR3-202ENST00000433165 BMP2KLQ5H9B9 411 aa9.41□□□□□ -0.9
CNKSR3-202ENST00000433165 PPP4R3BQ5MIZ7 849 aa9.41□□□□□ -0.9
CNKSR3-202ENST00000433165 CAVIN1Q6NZI2 390 aaKnown RBP9.41□□□□□ -0.9
CNKSR3-202ENST00000433165 RUNDC1Q96C34 613 aa9.41□□□□□ -0.9
CNKSR3-202ENST00000433165 BCL2L13Q9BXK5 485 aa9.41□□□□□ -0.9
CNKSR3-202ENST00000433165 GTF2E1P29083 439 aaPredicted RBP9.4□□□□□ -0.9
CNKSR3-202ENST00000433165 NUCB1Q02818 461 aa9.4□□□□□ -0.9
CNKSR3-202ENST00000433165 SULT6B1Q6IMI4 303 aa9.4□□□□□ -0.9
CNKSR3-202ENST00000433165 ZNF530Q6P9A1 599 aaPredicted RBP9.4□□□□□ -0.9
CNKSR3-202ENST00000433165 PTF1AQ7RTS3 328 aa9.4□□□□□ -0.9
CNKSR3-202ENST00000433165 PRIMPOLQ96LW4 560 aa9.4□□□□□ -0.9
CNKSR3-202ENST00000433165 NUCB2P80303 420 aa9.4□□□□□ -0.9
CNKSR3-202ENST00000433165 MPRIPQ6WCQ1 1025 aa9.4□□□□□ -0.9
CNKSR3-202ENST00000433165 FTSJ3Q8IY81 847 aaKnown RBP9.4□□□□□ -0.9
CNKSR3-202ENST00000433165 ZNF710Q8N1W2 664 aa9.4□□□□□ -0.9
CNKSR3-202ENST00000433165 ARID3AQ99856 593 aa9.4□□□□□ -0.9
CNKSR3-202ENST00000433165 DDX19BQ9UMR2 479 aa9.4□□□□□ -0.9
CNKSR3-202ENST00000433165 KAT6BQ8WYB5 2073 aa9.39□□□□□ -0.91
CNKSR3-202ENST00000433165 POLD1P28340 1107 aa9.39□□□□□ -0.91
CNKSR3-202ENST00000433165 AKAP4Q5JQC9 854 aa9.39□□□□□ -0.91
CNKSR3-202ENST00000433165 LRSAM1Q6UWE0 723 aa9.39□□□□□ -0.91
CNKSR3-202ENST00000433165 AKT1S1Q96B36 256 aa9.39□□□□□ -0.91
CNKSR3-202ENST00000433165 HMGN5P82970 282 aaKnown RBP9.39□□□□□ -0.91
CNKSR3-202ENST00000433165 MCTP1Q6DN14 999 aa9.39□□□□□ -0.91
CNKSR3-202ENST00000433165 BBXQ8WY36 941 aaPredicted RBP9.39□□□□□ -0.91
CNKSR3-202ENST00000433165 FOXD4L1Q9NU39 408 aa9.39□□□□□ -0.91
CNKSR3-202ENST00000433165 TFCP2L1Q9NZI6 479 aa9.39□□□□□ -0.91
CNKSR3-202ENST00000433165 CABP4P57796 275 aa9.38□□□□□ -0.91
CNKSR3-202ENST00000433165 KIAA2012Q0VF49 1180 aa9.38□□□□□ -0.91
CNKSR3-202ENST00000433165 COL3A1P02461 1466 aaPredicted RBP9.38□□□□□ -0.91
CNKSR3-202ENST00000433165 AK7Q96M32 723 aa9.38□□□□□ -0.91
CNKSR3-202ENST00000433165 TAF1LQ8IZX4 1826 aa9.37□□□□□ -0.91
CNKSR3-202ENST00000433165 EP400Q96L91 3159 aa9.37□□□□□ -0.91
CNKSR3-202ENST00000433165 TRIM27P14373 513 aa9.37□□□□□ -0.91
CNKSR3-202ENST00000433165 PIGBQ92521 554 aa9.37□□□□□ -0.91
CNKSR3-202ENST00000433165 CICQ96RK0 1608 aaPredicted RBP9.37□□□□□ -0.91
CNKSR3-202ENST00000433165 C4BP0C0L5 1744 aa9.37□□□□□ -0.91
CNKSR3-202ENST00000433165 COL24A1Q17RW2 1714 aa9.37□□□□□ -0.91
CNKSR3-202ENST00000433165 SCN11AQ9UI33 1791 aa9.37□□□□□ -0.91
CNKSR3-202ENST00000433165 MAP3K5Q99683 1374 aa9.37□□□□□ -0.91
CNKSR3-202ENST00000433165 TAF3Q5VWG9 929 aa9.37□□□□□ -0.91
CNKSR3-202ENST00000433165 GPT2Q8TD30 523 aa9.37□□□□□ -0.91
CNKSR3-202ENST00000433165 RBM42Q9BTD8 480 aaKnown RBP9.37□□□□□ -0.91
CNKSR3-202ENST00000433165 LRRC4BQ9NT99 713 aa9.37□□□□□ -0.91
CNKSR3-202ENST00000433165 ZBTB40Q9NUA8 1239 aa9.37□□□□□ -0.91
CNKSR3-202ENST00000433165 MRC1P22897 1456 aa9.36□□□□□ -0.91
CNKSR3-202ENST00000433165 CHD1LQ86WJ1 897 aa9.36□□□□□ -0.91
CNKSR3-202ENST00000433165 LOC102724428A0A0B4J2F2 783 aa9.36□□□□□ -0.91
CNKSR3-202ENST00000433165 U2SURPO15042 1029 aaKnown RBP9.36□□□□□ -0.91
CNKSR3-202ENST00000433165 SIK1P57059 783 aa9.36□□□□□ -0.91
CNKSR3-202ENST00000433165 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
CNKSR3-202ENST00000433165 ZNF827Q17R98 1081 aa9.36□□□□□ -0.91
CNKSR3-202ENST00000433165 ATF7IPQ6VMQ6 1270 aa9.36□□□□□ -0.91
CNKSR3-202ENST00000433165 RRP7AQ9Y3A4 280 aaKnown RBP9.36□□□□□ -0.91
CNKSR3-202ENST00000433165 ADAMTS7Q9UKP4 1686 aa9.35□□□□□ -0.91
CNKSR3-202ENST00000433165 CBX1P83916 185 aa9.35□□□□□ -0.91
CNKSR3-202ENST00000433165 RABEP1Q15276 862 aa9.35□□□□□ -0.91
CNKSR3-202ENST00000433165 ATP2B3Q16720 1220 aa9.35□□□□□ -0.91
CNKSR3-202ENST00000433165 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
CNKSR3-202ENST00000433165 AEBP1Q8IUX7 1158 aa9.35□□□□□ -0.91
CNKSR3-202ENST00000433165 PIBF1Q8WXW3 757 aa9.35□□□□□ -0.91
CNKSR3-202ENST00000433165 LNPKQ9C0E8 428 aa9.35□□□□□ -0.91
CNKSR3-202ENST00000433165 CWC22Q9HCG8 908 aaKnown RBP9.35□□□□□ -0.91
CNKSR3-202ENST00000433165 TMEM63CQ9P1W3 806 aa9.35□□□□□ -0.91
CNKSR3-202ENST00000433165 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
CNKSR3-202ENST00000433165 KDM6AO15550 1401 aaPredicted RBP9.35□□□□□ -0.91
CNKSR3-202ENST00000433165 PNPLA7Q6ZV29 1317 aa9.35□□□□□ -0.91
CNKSR3-202ENST00000433165 ZBTB7AO95365 584 aa9.34□□□□□ -0.91
CNKSR3-202ENST00000433165 ADRA2BP18089 450 aa9.34□□□□□ -0.91
CNKSR3-202ENST00000433165 ATP6V1AP38606 617 aa9.34□□□□□ -0.91
CNKSR3-202ENST00000433165 ITPRIPQ8IWB1 547 aa9.34□□□□□ -0.91
CNKSR3-202ENST00000433165 TUBGCP6Q96RT7 1819 aa9.34□□□□□ -0.91
CNKSR3-202ENST00000433165 RC3H1Q5TC82 1133 aaKnown RBP9.34□□□□□ -0.91
CNKSR3-202ENST00000433165 TMEM51Q9NW97 253 aa9.34□□□□□ -0.91
CNKSR3-202ENST00000433165 RBM27Q9P2N5 1060 aaKnown RBP9.34□□□□□ -0.91
CNKSR3-202ENST00000433165 CNTNAP4Q9C0A0 1308 aa9.33□□□□□ -0.92
CNKSR3-202ENST00000433165 FCHSD2O94868 740 aa9.33□□□□□ -0.92
CNKSR3-202ENST00000433165 HMOX1P09601 288 aa9.33□□□□□ -0.92
CNKSR3-202ENST00000433165 ATG3Q9NT62 314 aa9.33□□□□□ -0.92
CNKSR3-202ENST00000433165 SMC4Q9NTJ3 1288 aa9.33□□□□□ -0.92
CNKSR3-202ENST00000433165 KIF3AQ9Y496 699 aa9.33□□□□□ -0.92
CNKSR3-202ENST00000433165 SYCE3A1L190 88 aa9.33□□□□□ -0.92
CNKSR3-202ENST00000433165 MBD3O95983 291 aa9.33□□□□□ -0.92
CNKSR3-202ENST00000433165 SLC52A2Q9HAB3 445 aa9.33□□□□□ -0.92
CNKSR3-202ENST00000433165 SPTLC3Q9NUV7 552 aa9.33□□□□□ -0.92
CNKSR3-202ENST00000433165 GNAT3A8MTJ3 354 aa9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 RNMTO43148 476 aaKnown RBP9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 HTATSF1O43719 755 aaKnown RBP9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 PRPF40AO75400 957 aaKnown RBP9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 COL5A3P25940 1745 aaPredicted RBP9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 PTGER2P43116 358 aa9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 FKBP5Q13451 457 aaPredicted RBP9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 PKP1Q13835 747 aa9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 TMEM57Q8N5G2 664 aa9.32□□□□□ -0.92
CNKSR3-202ENST00000433165 JARID2Q92833 1246 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms