RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 MAP4K4O95819 1239 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-206ENST00000433118 ZNF790Q6PG37 636 aa12.74□□□□□ -0.37
SMPD4-206ENST00000433118 CWF19L2Q2TBE0 894 aaKnown RBP12.74□□□□□ -0.37
SMPD4-206ENST00000433118 LARP1Q6PKG0 1096 aaKnown RBP12.74□□□□□ -0.37
SMPD4-206ENST00000433118 RNF214Q8ND24 703 aa12.74□□□□□ -0.37
SMPD4-206ENST00000433118 DNAAF4Q8WXU2 420 aa12.74□□□□□ -0.37
SMPD4-206ENST00000433118 INTS4Q96HW7 963 aaKnown RBP12.74□□□□□ -0.37
SMPD4-206ENST00000433118 ZNF496Q96IT1 587 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-206ENST00000433118 LRRC37A3O60309 1634 aa12.74□□□□□ -0.37
SMPD4-206ENST00000433118 RRP9O43818 475 aaKnown RBP12.73□□□□□ -0.37
SMPD4-206ENST00000433118 SURF6O75683 361 aaKnown RBP12.73□□□□□ -0.37
SMPD4-206ENST00000433118 TPM2P07951 284 aa12.73□□□□□ -0.37
SMPD4-206ENST00000433118 SLC52A2Q9HAB3 445 aa12.73□□□□□ -0.37
SMPD4-206ENST00000433118 MAP3K2Q9Y2U5 619 aa12.73□□□□□ -0.37
SMPD4-206ENST00000433118 SOS1Q07889 1333 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-206ENST00000433118 HS1BP3Q53T59 392 aa12.73□□□□□ -0.37
SMPD4-206ENST00000433118 PDLIM2Q96JY6 352 aa12.73□□□□□ -0.37
SMPD4-206ENST00000433118 DBF4Q9UBU7 674 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-206ENST00000433118 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-206ENST00000433118 CACNA1FO60840 1977 aa12.73□□□□□ -0.37
SMPD4-206ENST00000433118 KAT6BQ8WYB5 2073 aa12.73□□□□□ -0.37
SMPD4-206ENST00000433118 JARID2Q92833 1246 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-206ENST00000433118 IL25Q9H293 177 aa12.72□□□□□ -0.37
SMPD4-206ENST00000433118 USP16Q9Y5T5 823 aa12.72□□□□□ -0.37
SMPD4-206ENST00000433118 XIRP1Q702N8 1843 aaKnown RBP12.72□□□□□ -0.37
SMPD4-206ENST00000433118 OFD1O75665 1012 aa12.72□□□□□ -0.37
SMPD4-206ENST00000433118 CABP4P57796 275 aa12.72□□□□□ -0.37
SMPD4-206ENST00000433118 PPP1R42Q7Z4L9 355 aa12.72□□□□□ -0.37
SMPD4-206ENST00000433118 TTC5Q8N0Z6 440 aa12.72□□□□□ -0.37
SMPD4-206ENST00000433118 GDPD2Q9HCC8 539 aa12.72□□□□□ -0.37
SMPD4-206ENST00000433118 NOL7Q9UMY1 257 aaKnown RBP12.72□□□□□ -0.37
SMPD4-206ENST00000433118 SOS2Q07890 1332 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-206ENST00000433118 KDM6AO15550 1401 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-206ENST00000433118 GLIPR1L2Q4G1C9 344 aa12.72□□□□□ -0.37
SMPD4-206ENST00000433118 SYAP1Q96A49 352 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-206ENST00000433118 PTCD1O75127 700 aaKnown RBP12.71□□□□□ -0.37
SMPD4-206ENST00000433118 AOX1Q06278 1338 aa12.71□□□□□ -0.37
SMPD4-206ENST00000433118 SSH3Q8TE77 659 aa12.71□□□□□ -0.37
SMPD4-206ENST00000433118 SRGAP3O43295 1099 aa12.7□□□□□ -0.38
SMPD4-206ENST00000433118 C9orf78Q9NZ63 289 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-206ENST00000433118 PXDNLA1KZ92 1463 aa12.7□□□□□ -0.38
SMPD4-206ENST00000433118 WDR33Q9C0J8 1336 aaKnown RBP12.7□□□□□ -0.38
SMPD4-206ENST00000433118 HSPA4P34932 840 aa12.7□□□□□ -0.38
SMPD4-206ENST00000433118 TPRNQ4KMQ1 711 aa12.7□□□□□ -0.38
SMPD4-206ENST00000433118 BEND3Q5T5X7 828 aa12.7□□□□□ -0.38
SMPD4-206ENST00000433118 RHPN1Q8TCX5 695 aa12.7□□□□□ -0.38
SMPD4-206ENST00000433118 TSPY26PQ9H489 355 aa12.7□□□□□ -0.38
SMPD4-206ENST00000433118 RAB11FIP3O75154 756 aa12.7□□□□□ -0.38
SMPD4-206ENST00000433118 ADCY9O60503 1353 aa12.69□□□□□ -0.38
SMPD4-206ENST00000433118 PHRF1Q9P1Y6 1649 aaKnown RBP12.69□□□□□ -0.38
SMPD4-206ENST00000433118 A0A0G2JS52 829 aa12.69□□□□□ -0.38
SMPD4-206ENST00000433118 ZCRB1Q8TBF4 217 aaKnown RBP12.69□□□□□ -0.38
SMPD4-206ENST00000433118 BTG4Q9NY30 223 aa12.69□□□□□ -0.38
SMPD4-206ENST00000433118 NCAPD2Q15021 1401 aa12.69□□□□□ -0.38
SMPD4-206ENST00000433118 WDR17Q8IZU2 1322 aa12.69□□□□□ -0.38
SMPD4-206ENST00000433118 RIC3Q7Z5B4 369 aa12.69□□□□□ -0.38
SMPD4-206ENST00000433118 DCAF5Q96JK2 942 aa12.69□□□□□ -0.38
SMPD4-206ENST00000433118 ZNF330Q9Y3S2 320 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-206ENST00000433118 R3HCC1Q9Y3T6 440 aaKnown RBP12.69□□□□□ -0.38
SMPD4-206ENST00000433118 CAMTA1Q9Y6Y1 1673 aa12.69□□□□□ -0.38
SMPD4-206ENST00000433118 HOXB7P09629 217 aa12.68□□□□□ -0.38
SMPD4-206ENST00000433118 CNTROBQ8N137 903 aa12.68□□□□□ -0.38
SMPD4-206ENST00000433118 XAGE3Q8WTP9 111 aa12.68□□□□□ -0.38
SMPD4-206ENST00000433118 KIF1BPQ96EK5 621 aa12.68□□□□□ -0.38
SMPD4-206ENST00000433118 CCDC39Q9UFE4 941 aa12.68□□□□□ -0.38
SMPD4-206ENST00000433118 ZKSCAN5Q9Y2L8 839 aa12.68□□□□□ -0.38
SMPD4-206ENST00000433118 GADD45BO75293 160 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-206ENST00000433118 PTMAP06454 111 aaKnown RBP12.68□□□□□ -0.38
SMPD4-206ENST00000433118 COPS6Q7L5N1 327 aa12.68□□□□□ -0.38
SMPD4-206ENST00000433118 USP48Q86UV5 1035 aa12.68□□□□□ -0.38
SMPD4-206ENST00000433118 PI4K2BQ8TCG2 481 aa12.68□□□□□ -0.38
SMPD4-206ENST00000433118 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
SMPD4-206ENST00000433118 RAD50Q92878 1312 aa12.68□□□□□ -0.38
SMPD4-206ENST00000433118 PHF14O94880 888 aa12.68□□□□□ -0.38
SMPD4-206ENST00000433118 OS9Q13438 667 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-206ENST00000433118 TCHHQ07283 1943 aa12.68□□□□□ -0.38
SMPD4-206ENST00000433118 SGSM2O43147 1006 aa12.67□□□□□ -0.38
SMPD4-206ENST00000433118 ZNF500O60304 480 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-206ENST00000433118 ADAMTS2O95450 1211 aa12.67□□□□□ -0.38
SMPD4-206ENST00000433118 PDIA6Q15084 440 aa12.67□□□□□ -0.38
SMPD4-206ENST00000433118 CWC27Q6UX04 472 aaKnown RBP12.67□□□□□ -0.38
SMPD4-206ENST00000433118 LARP6Q9BRS8 491 aaKnown RBP12.67□□□□□ -0.38
SMPD4-206ENST00000433118 N4BP2Q86UW6 1770 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-206ENST00000433118 LMO7Q8WWI1 1683 aa12.67□□□□□ -0.38
SMPD4-206ENST00000433118 EPB41L2O43491 1005 aaKnown RBP12.67□□□□□ -0.38
SMPD4-206ENST00000433118 POLA2Q14181 598 aa12.67□□□□□ -0.38
SMPD4-206ENST00000433118 KSR2Q6VAB6 950 aa12.67□□□□□ -0.38
SMPD4-206ENST00000433118 IL17RAQ96F46 866 aa12.67□□□□□ -0.38
SMPD4-206ENST00000433118 PA2G4Q9UQ80 394 aaKnown RBP12.67□□□□□ -0.38
SMPD4-206ENST00000433118 DDX21Q9NR30 783 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMPD4-206ENST00000433118 SNX14Q9Y5W7 946 aa12.67□□□□□ -0.38
SMPD4-206ENST00000433118 CPDO75976 1380 aa12.67□□□□□ -0.38
SMPD4-206ENST00000433118 IL2RBP14784 551 aa12.66□□□□□ -0.38
SMPD4-206ENST00000433118 PIP4K2BP78356 416 aa12.66□□□□□ -0.38
SMPD4-206ENST00000433118 ATP5J2-PTCD1G3V325 749 aa12.66□□□□□ -0.38
SMPD4-206ENST00000433118 AK2P54819 239 aa12.66□□□□□ -0.38
SMPD4-206ENST00000433118 HYPKQ9NX55 129 aa12.66□□□□□ -0.38
SMPD4-206ENST00000433118 MYD88Q99836 296 aa12.65□□□□□ -0.38
SMPD4-206ENST00000433118 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMPD4-206ENST00000433118 COL18A1P39060 1754 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 218 ms