RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 C21orf2O43822 256 aa21.43■■□□□ 1.02
ACTB-205ENST00000432588 ZNF219Q9P2Y4 722 aaPredicted RBP21.43■■□□□ 1.02
ACTB-205ENST00000432588 PRELPP51888 382 aa21.42■■□□□ 1.02
ACTB-205ENST00000432588 SOGA3Q5TF21 947 aa21.42■■□□□ 1.02
ACTB-205ENST00000432588 MASTLQ96GX5 879 aa21.42■■□□□ 1.02
ACTB-205ENST00000432588 MIS18AQ9NYP9 233 aa21.42■■□□□ 1.02
ACTB-205ENST00000432588 MAPK8IP3Q9UPT6 1336 aa21.42■■□□□ 1.02
ACTB-205ENST00000432588 COL11A2P13942 1736 aaPredicted RBP21.41■■□□□ 1.02
ACTB-205ENST00000432588 NBPF26B4DH59 902 aa21.41■■□□□ 1.02
ACTB-205ENST00000432588 SRGNP10124 158 aa21.41■■□□□ 1.02
ACTB-205ENST00000432588 VEGFAP15692 232 aaPredicted RBP21.41■■□□□ 1.02
ACTB-205ENST00000432588 NFE2L2Q16236 605 aa21.41■■□□□ 1.02
ACTB-205ENST00000432588 NBPF10Q6P3W6 841 aaKnown RBP21.41■■□□□ 1.02
ACTB-205ENST00000432588 TPTE2Q6XPS3 522 aa21.41■■□□□ 1.02
ACTB-205ENST00000432588 NBPF15Q8N660 670 aa21.41■■□□□ 1.02
ACTB-205ENST00000432588 PLEKHF1Q96S99 279 aa21.41■■□□□ 1.02
ACTB-205ENST00000432588 DPY19L2Q6NUT2 758 aa21.4■■□□□ 1.02
ACTB-205ENST00000432588 PRPF40BQ6NWY9 871 aaKnown RBP21.4■■□□□ 1.02
ACTB-205ENST00000432588 SMC1BQ8NDV3 1235 aa21.4■■□□□ 1.02
ACTB-205ENST00000432588 NIP7Q9Y221 180 aaKnown RBP eCLIP21.4■■□□□ 1.02
ACTB-205ENST00000432588 LTBP3Q9NS15 1303 aa21.39■■□□□ 1.01
ACTB-205ENST00000432588 ERFEQ4G0M1 354 aa21.39■■□□□ 1.01
ACTB-205ENST00000432588 TAOK3Q9H2K8 898 aa21.39■■□□□ 1.01
ACTB-205ENST00000432588 TIAM2Q8IVF5 1701 aa21.38■■□□□ 1.01
ACTB-205ENST00000432588 NPR1P16066 1061 aa21.37■■□□□ 1.01
ACTB-205ENST00000432588 DNAJC5GQ8N7S2 189 aa21.37■■□□□ 1.01
ACTB-205ENST00000432588 LAMB4A4D0S4 1761 aa21.36■■□□□ 1.01
ACTB-205ENST00000432588 GTF2E1P29083 439 aaPredicted RBP21.36■■□□□ 1.01
ACTB-205ENST00000432588 DLG5Q8TDM6 1919 aa21.35■■□□□ 1.01
ACTB-205ENST00000432588 FER1L6Q2WGJ9 1857 aa21.35■■□□□ 1.01
ACTB-205ENST00000432588 CCDC88AQ3V6T2 1871 aa21.35■■□□□ 1.01
ACTB-205ENST00000432588 EIF4A1P60842 406 aaKnown RBP21.35■■□□□ 1.01
ACTB-205ENST00000432588 RALBP1Q15311 655 aa21.35■■□□□ 1.01
ACTB-205ENST00000432588 KDM3BQ7LBC6 1761 aa21.35■■□□□ 1.01
ACTB-205ENST00000432588 WDR90Q96KV7 1748 aa21.35■■□□□ 1.01
ACTB-205ENST00000432588 KLRG2A4D1S0 409 aaPredicted RBP21.34■■□□□ 1.01
ACTB-205ENST00000432588 FAM177BA6PVY3 158 aa21.34■■□□□ 1.01
ACTB-205ENST00000432588 ERVV-1B6SEH8 477 aa21.34■■□□□ 1.01
ACTB-205ENST00000432588 HLFQ16534 295 aa21.34■■□□□ 1.01
ACTB-205ENST00000432588 KIF6Q6ZMV9 814 aa21.34■■□□□ 1.01
ACTB-205ENST00000432588 NGEFQ8N5V2 710 aa21.34■■□□□ 1.01
ACTB-205ENST00000432588 THUMPD2Q9BTF0 503 aaKnown RBP21.34■■□□□ 1.01
ACTB-205ENST00000432588 RRP7AQ9Y3A4 280 aaKnown RBP21.34■■□□□ 1.01
ACTB-205ENST00000432588 SLX4Q8IY92 1834 aa21.34■■□□□ 1.01
ACTB-205ENST00000432588 CCDC93Q567U6 631 aa21.33■■□□□ 1.01
ACTB-205ENST00000432588 NYXQ9GZU5 481 aa21.33■■□□□ 1.01
ACTB-205ENST00000432588 ARFGEF2Q9Y6D5 1785 aa21.33■■□□□ 1
ACTB-205ENST00000432588 IFFO2Q5TF58 517 aa21.32■■□□□ 1
ACTB-205ENST00000432588 MAP3K15Q6ZN16 1313 aa21.31■■□□□ 1
ACTB-205ENST00000432588 C7orf43Q8WVR3 580 aa21.31■■□□□ 1
ACTB-205ENST00000432588 TSPYL4Q9UJ04 414 aa21.31■■□□□ 1
ACTB-205ENST00000432588 CACNA1SQ13698 1873 aa21.3■■□□□ 1
ACTB-205ENST00000432588 DICER1Q9UPY3 1922 aaKnown RBP21.3■■□□□ 1
ACTB-205ENST00000432588 MYL6BP14649 208 aa21.3■■□□□ 1
ACTB-205ENST00000432588 ALDH1B1P30837 517 aa21.3■■□□□ 1
ACTB-205ENST00000432588 HTRA3P83110 453 aa21.3■■□□□ 1
ACTB-205ENST00000432588 KLRG1Q96E93 195 aa21.3■■□□□ 1
ACTB-205ENST00000432588 ERBB4Q15303 1308 aa21.29■■□□□ 1
ACTB-205ENST00000432588 RIPK4P57078 832 aa21.29■■□□□ 1
ACTB-205ENST00000432588 LMOD3Q0VAK6 560 aa21.29■■□□□ 1
ACTB-205ENST00000432588 POTECB2RU33 542 aa21.28■■□□□ 1
ACTB-205ENST00000432588 FKBP4Q02790 459 aaKnown RBP eCLIP21.28■■□□□ 12e-6■■□□□ 13.5
ACTB-205ENST00000432588 TTLL7Q6ZT98 887 aa21.28■■□□□ 1
ACTB-205ENST00000432588 RTKN2Q8IZC4 609 aa21.28■■□□□ 1
ACTB-205ENST00000432588 ZBTB3Q9H5J0 574 aa21.27■■□□□ 1
ACTB-205ENST00000432588 BABAM1Q9NWV8 329 aa21.27■■□□□ 1
ACTB-205ENST00000432588 DDNO94850 711 aaPredicted RBP21.26■□□□□ 0.99
ACTB-205ENST00000432588 IBTKQ9P2D0 1353 aaPredicted RBP21.25■□□□□ 0.99
ACTB-205ENST00000432588 GPTP24298 496 aa21.25■□□□□ 0.99
ACTB-205ENST00000432588 DDX10Q13206 875 aaKnown RBP21.25■□□□□ 0.99
ACTB-205ENST00000432588 CRY2Q49AN0 593 aa21.25■□□□□ 0.99
ACTB-205ENST00000432588 NUTM1Q86Y26 1132 aa21.25■□□□□ 0.99
ACTB-205ENST00000432588 MYBBP1AQ9BQG0 1328 aaKnown RBP21.25■□□□□ 0.99
ACTB-205ENST00000432588 ABCC12Q96J65 1359 aa21.24■□□□□ 0.99
ACTB-205ENST00000432588 IQCA1LA6NCM1 817 aa21.24■□□□□ 0.99
ACTB-205ENST00000432588 TMPOP42166 694 aaKnown RBP21.24■□□□□ 0.99
ACTB-205ENST00000432588 JMYQ8N9B5 988 aa21.24■□□□□ 0.99
ACTB-205ENST00000432588 RPGRQ92834 1020 aaKnown RBP21.24■□□□□ 0.99
ACTB-205ENST00000432588 NUP98P52948 1817 aa21.23■□□□□ 0.99
ACTB-205ENST00000432588 EIF2S2P20042 333 aaKnown RBP21.23■□□□□ 0.99
ACTB-205ENST00000432588 GIGYF2Q6Y7W6 1299 aaKnown RBP21.23■□□□□ 0.99
ACTB-205ENST00000432588 ZNF277Q9NRM2 450 aaPredicted RBP21.23■□□□□ 0.99
ACTB-205ENST00000432588 RIC1Q4ADV7 1423 aa21.22■□□□□ 0.99
ACTB-205ENST00000432588 CC2D2BQ6DHV5 1058 aa21.22■□□□□ 0.99
ACTB-205ENST00000432588 OLFM4Q6UX06 510 aa21.22■□□□□ 0.99
ACTB-205ENST00000432588 PPP1R42Q7Z4L9 355 aa21.22■□□□□ 0.99
ACTB-205ENST00000432588 ZNF34Q8IZ26 560 aa21.22■□□□□ 0.99
ACTB-205ENST00000432588 UBN2Q6ZU65 1347 aa21.22■□□□□ 0.99
ACTB-205ENST00000432588 PCNTO95613 3336 aa21.21■□□□□ 0.99
ACTB-205ENST00000432588 PARP10Q53GL7 1025 aa21.21■□□□□ 0.99
ACTB-205ENST00000432588 SUSD4Q5VX71 490 aa21.21■□□□□ 0.99
ACTB-205ENST00000432588 CHADLQ6NUI6 762 aa21.21■□□□□ 0.99
ACTB-205ENST00000432588 L3MBTL3Q96JM7 780 aaPredicted RBP21.21■□□□□ 0.99
ACTB-205ENST00000432588 HOXA10P31260 410 aaPredicted RBP21.2■□□□□ 0.98
ACTB-205ENST00000432588 IARSP41252 1262 aaKnown RBP21.2■□□□□ 0.98
ACTB-205ENST00000432588 WDR43Q15061 677 aaKnown RBP eCLIP21.2■□□□□ 0.98
ACTB-205ENST00000432588 GRIPAP1Q4V328 841 aa21.2■□□□□ 0.98
ACTB-205ENST00000432588 SYNE4Q8N205 404 aa21.2■□□□□ 0.98
ACTB-205ENST00000432588 NEUROD2Q15784 382 aa21.19■□□□□ 0.98
ACTB-205ENST00000432588 RBM17Q96I25 401 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms