RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 SNRPA1P09661 255 aaKnown RBP17.91■□□□□ 0.46
RFTN1-203ENST00000432519 ARXQ96QS3 562 aa17.91■□□□□ 0.46
RFTN1-203ENST00000432519 SIL1Q9H173 461 aa17.91■□□□□ 0.46
RFTN1-203ENST00000432519 CIZ1Q9ULV3 898 aaPredicted RBP17.91■□□□□ 0.46
RFTN1-203ENST00000432519 AOX1Q06278 1338 aa17.91■□□□□ 0.46
RFTN1-203ENST00000432519 GLI3P10071 1580 aa17.91■□□□□ 0.46
RFTN1-203ENST00000432519 NEK4P51957 841 aa17.91■□□□□ 0.46
RFTN1-203ENST00000432519 WDR17Q8IZU2 1322 aa17.91■□□□□ 0.46
RFTN1-203ENST00000432519 ATP5J2-PTCD1G3V325 749 aa17.9■□□□□ 0.46
RFTN1-203ENST00000432519 PTCD1O75127 700 aaKnown RBP17.9■□□□□ 0.46
RFTN1-203ENST00000432519 GCKRQ14397 625 aa17.9■□□□□ 0.46
RFTN1-203ENST00000432519 STRN4Q9NRL3 753 aa17.9■□□□□ 0.46
RFTN1-203ENST00000432519 LARP1Q6PKG0 1096 aaKnown RBP17.89■□□□□ 0.45
RFTN1-203ENST00000432519 ANKRD13DQ6ZTN6 518 aa17.89■□□□□ 0.45
RFTN1-203ENST00000432519 FMNL2Q96PY5 1086 aa17.89■□□□□ 0.45
RFTN1-203ENST00000432519 TLR7Q9NYK1 1049 aaKnown RBP17.89■□□□□ 0.45
RFTN1-203ENST00000432519 EIF5BO60841 1220 aaKnown RBP17.89■□□□□ 0.45
RFTN1-203ENST00000432519 PRKCSHP14314 528 aaPredicted RBP17.89■□□□□ 0.45
RFTN1-203ENST00000432519 NOL8Q76FK4 1167 aaKnown RBP17.89■□□□□ 0.45
RFTN1-203ENST00000432519 METTL22Q9BUU2 404 aaPredicted RBP17.89■□□□□ 0.45
RFTN1-203ENST00000432519 UPF3BQ9BZI7 483 aaKnown RBP17.89■□□□□ 0.45
RFTN1-203ENST00000432519 COL5A2P05997 1499 aaPredicted RBP17.89■□□□□ 0.45
RFTN1-203ENST00000432519 NBPF26B4DH59 902 aa17.88■□□□□ 0.45
RFTN1-203ENST00000432519 NBPF14Q5TI25 921 aa17.88■□□□□ 0.45
RFTN1-203ENST00000432519 NBPF10Q6P3W6 841 aaKnown RBP17.88■□□□□ 0.45
RFTN1-203ENST00000432519 NBPF15Q8N660 670 aa17.88■□□□□ 0.45
RFTN1-203ENST00000432519 EAF2Q96CJ1 260 aaPredicted RBP17.88■□□□□ 0.45
RFTN1-203ENST00000432519 ABCC6O95255 1503 aa17.88■□□□□ 0.45
RFTN1-203ENST00000432519 ST18O60284 1047 aa17.88■□□□□ 0.45
RFTN1-203ENST00000432519 CLASRPQ8N2M8 674 aaKnown RBP17.88■□□□□ 0.45
RFTN1-203ENST00000432519 ZCRB1Q8TBF4 217 aaKnown RBP17.88■□□□□ 0.45
RFTN1-203ENST00000432519 DDX54Q8TDD1 881 aaKnown RBP17.88■□□□□ 0.45
RFTN1-203ENST00000432519 HSP90AB4PQ58FF6 505 aa17.87■□□□□ 0.45
RFTN1-203ENST00000432519 CHAMP1Q96JM3 812 aa17.87■□□□□ 0.45
RFTN1-203ENST00000432519 CCDC8Q9H0W5 538 aaPredicted RBP17.87■□□□□ 0.45
RFTN1-203ENST00000432519 CWC27Q6UX04 472 aaKnown RBP17.87■□□□□ 0.45
RFTN1-203ENST00000432519 AACSQ86V21 672 aa17.87■□□□□ 0.45
RFTN1-203ENST00000432519 USP42Q9H9J4 1324 aaKnown RBP17.86■□□□□ 0.45
RFTN1-203ENST00000432519 SGSM2O43147 1006 aa17.86■□□□□ 0.45
RFTN1-203ENST00000432519 NEXNQ0ZGT2 675 aa17.85■□□□□ 0.45
RFTN1-203ENST00000432519 UBE3BQ7Z3V4 1068 aa17.85■□□□□ 0.45
RFTN1-203ENST00000432519 TMX3Q96JJ7 454 aa17.85■□□□□ 0.45
RFTN1-203ENST00000432519 A1BGP04217 495 aa17.85■□□□□ 0.45
RFTN1-203ENST00000432519 ZDHHC9Q9Y397 364 aa17.85■□□□□ 0.45
RFTN1-203ENST00000432519 IFIT2P09913 472 aaKnown RBP17.84■□□□□ 0.45
RFTN1-203ENST00000432519 TTLL7Q6ZT98 887 aa17.84■□□□□ 0.45
RFTN1-203ENST00000432519 CNTROBQ8N137 903 aa17.84■□□□□ 0.45
RFTN1-203ENST00000432519 ECHDC1Q9NTX5 307 aa17.84■□□□□ 0.45
RFTN1-203ENST00000432519 TTC41PQ6P2S7 1318 aa17.84■□□□□ 0.45
RFTN1-203ENST00000432519 DDX11L8A8MPP1 907 aa17.84■□□□□ 0.45
RFTN1-203ENST00000432519 GLRX3O76003 335 aaKnown RBP17.84■□□□□ 0.45
RFTN1-203ENST00000432519 CYP2E1P05181 493 aaPredicted RBP17.84■□□□□ 0.45
RFTN1-203ENST00000432519 RASEFQ8IZ41 740 aa17.84■□□□□ 0.45
RFTN1-203ENST00000432519 LSG1Q9H089 658 aaKnown RBP17.84■□□□□ 0.45
RFTN1-203ENST00000432519 PCDH11XQ9BZA7 1347 aa17.83■□□□□ 0.45
RFTN1-203ENST00000432519 PCDH11YQ9BZA8 1340 aa17.83■□□□□ 0.45
RFTN1-203ENST00000432519 HSPA4P34932 840 aa17.83■□□□□ 0.44
RFTN1-203ENST00000432519 G3BP1Q13283 466 aaKnown RBP eCLIP17.83■□□□□ 0.44
RFTN1-203ENST00000432519 ABCA3Q99758 1704 aa17.82■□□□□ 0.44
RFTN1-203ENST00000432519 BAG4O95429 457 aaKnown RBP17.82■□□□□ 0.44
RFTN1-203ENST00000432519 IL2RBP14784 551 aa17.82■□□□□ 0.44
RFTN1-203ENST00000432519 GBP4Q96PP9 640 aa17.82■□□□□ 0.44
RFTN1-203ENST00000432519 ARFGEF2Q9Y6D5 1785 aa17.82■□□□□ 0.44
RFTN1-203ENST00000432519 RTN4Q9NQC3 1192 aaKnown RBP17.82■□□□□ 0.44
RFTN1-203ENST00000432519 RAD50Q92878 1312 aa17.81■□□□□ 0.44
RFTN1-203ENST00000432519 A0A087WZG4 1122 aa17.81■□□□□ 0.44
RFTN1-203ENST00000432519 RFX5P48382 616 aaPredicted RBP17.81■□□□□ 0.44
RFTN1-203ENST00000432519 PTH1RQ03431 593 aa17.81■□□□□ 0.44
RFTN1-203ENST00000432519 LARP6Q9BRS8 491 aaKnown RBP17.81■□□□□ 0.44
RFTN1-203ENST00000432519 CARD10Q9BWT7 1032 aa17.81■□□□□ 0.44
RFTN1-203ENST00000432519 SHANK3Q9BYB0 1731 aa17.81■□□□□ 0.44
RFTN1-203ENST00000432519 AFDNP55196 1824 aaKnown RBP17.81■□□□□ 0.44
RFTN1-203ENST00000432519 MCCP23508 829 aa17.81■□□□□ 0.44
RFTN1-203ENST00000432519 FOXD4L5Q5VV16 416 aaPredicted RBP17.81■□□□□ 0.44
RFTN1-203ENST00000432519 ERC1Q8IUD2 1116 aa17.81■□□□□ 0.44
RFTN1-203ENST00000432519 FOXD4L4Q8WXT5 416 aaPredicted RBP17.81■□□□□ 0.44
RFTN1-203ENST00000432519 EDC3Q96F86 508 aaKnown RBP17.81■□□□□ 0.44
RFTN1-203ENST00000432519 PARP4Q9UKK3 1724 aaKnown RBP17.81■□□□□ 0.44
RFTN1-203ENST00000432519 CPA1P15085 419 aa17.8■□□□□ 0.44
RFTN1-203ENST00000432519 CASP7P55210 303 aa17.8■□□□□ 0.44
RFTN1-203ENST00000432519 ANAPC15P60006 121 aa17.8■□□□□ 0.44
RFTN1-203ENST00000432519 PTPN12Q05209 780 aaKnown RBP17.8■□□□□ 0.44
RFTN1-203ENST00000432519 BOLA2Q9H3K6 86 aa17.8■□□□□ 0.44
RFTN1-203ENST00000432519 NDUFB9Q9Y6M9 179 aa17.8■□□□□ 0.44
RFTN1-203ENST00000432519 COL9A3Q14050 684 aaPredicted RBP17.8■□□□□ 0.44
RFTN1-203ENST00000432519 FAM227BQ96M60 508 aa17.8■□□□□ 0.44
RFTN1-203ENST00000432519 SNX14Q9Y5W7 946 aa17.8■□□□□ 0.44
RFTN1-203ENST00000432519 KCPQ6ZWJ8 1503 aa17.79■□□□□ 0.44
RFTN1-203ENST00000432519 DTNBO60941 627 aa17.79■□□□□ 0.44
RFTN1-203ENST00000432519 EVA1CP58658 441 aa17.79■□□□□ 0.44
RFTN1-203ENST00000432519 PLBD2Q8NHP8 589 aa17.79■□□□□ 0.44
RFTN1-203ENST00000432519 IL17RAQ96F46 866 aa17.79■□□□□ 0.44
RFTN1-203ENST00000432519 ZBTB3Q9H5J0 574 aa17.79■□□□□ 0.44
RFTN1-203ENST00000432519 HDAC5Q9UQL6 1122 aa17.79■□□□□ 0.44
RFTN1-203ENST00000432519 PLEKHG2Q9H7P9 1386 aa17.78■□□□□ 0.44
RFTN1-203ENST00000432519 FSD2A1L4K1 749 aa17.78■□□□□ 0.44
RFTN1-203ENST00000432519 NKX1-1Q15270 411 aaPredicted RBP17.78■□□□□ 0.44
RFTN1-203ENST00000432519 ERVV-2B6SEH9 535 aa17.78■□□□□ 0.44
RFTN1-203ENST00000432519 CHGBP05060 677 aa17.78■□□□□ 0.44
RFTN1-203ENST00000432519 CLEC17AQ6ZS10 378 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms