RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 POTEAQ6S8J7 498 aa6.88□□□□□ -1.31
CLK1-204ENST00000432425 LYPD4Q6UWN0 246 aa6.88□□□□□ -1.31
CLK1-204ENST00000432425 LRRC69Q6ZNQ3 347 aa6.88□□□□□ -1.31
CLK1-204ENST00000432425 C2orf49Q9BVC5 232 aaPredicted RBP6.88□□□□□ -1.31
CLK1-204ENST00000432425 CELA2BP08218 269 aaPredicted RBP6.87□□□□□ -1.31
CLK1-204ENST00000432425 FAM157BP0CG42 384 aa6.87□□□□□ -1.31
CLK1-204ENST00000432425 ERICH6Q7L0X2 663 aa6.87□□□□□ -1.31
CLK1-204ENST00000432425 NGLY1Q96IV0 654 aa6.87□□□□□ -1.31
CLK1-204ENST00000432425 ENAMQ9NRM1 1142 aa6.87□□□□□ -1.31
CLK1-204ENST00000432425 MAPTP10636 758 aaKnown RBP6.87□□□□□ -1.31
CLK1-204ENST00000432425 TNP2Q05952 138 aa6.87□□□□□ -1.31
CLK1-204ENST00000432425 ELOAQ14241 798 aaKnown RBP6.87□□□□□ -1.31
CLK1-204ENST00000432425 ALDH16A1Q8IZ83 802 aa6.87□□□□□ -1.31
CLK1-204ENST00000432425 ACDQ96AP0 544 aa6.87□□□□□ -1.31
CLK1-204ENST00000432425 PBXIP1Q96AQ6 731 aa6.87□□□□□ -1.31
CLK1-204ENST00000432425 OXCT2Q9BYC2 517 aaPredicted RBP6.87□□□□□ -1.31
CLK1-204ENST00000432425 ANKIB1Q9P2G1 1089 aa6.87□□□□□ -1.31
CLK1-204ENST00000432425 BCRP11274 1271 aa6.86□□□□□ -1.31
CLK1-204ENST00000432425 CTBSQ01459 385 aa6.86□□□□□ -1.31
CLK1-204ENST00000432425 CCDC82Q8N4S0 544 aa6.86□□□□□ -1.31
CLK1-204ENST00000432425 VTI1AQ96AJ9 217 aa6.86□□□□□ -1.31
CLK1-204ENST00000432425 KLRG1Q96E93 195 aa6.86□□□□□ -1.31
CLK1-204ENST00000432425 ADAMTS8Q9UP79 889 aa6.86□□□□□ -1.31
CLK1-204ENST00000432425 ARHGEF15O94989 841 aa6.85□□□□□ -1.31
CLK1-204ENST00000432425 ATG7O95352 703 aa6.85□□□□□ -1.31
CLK1-204ENST00000432425 CD33P20138 364 aa6.85□□□□□ -1.31
CLK1-204ENST00000432425 HIF1AQ16665 826 aa6.85□□□□□ -1.31
CLK1-204ENST00000432425 GDF2Q9UK05 429 aaPredicted RBP6.85□□□□□ -1.31
CLK1-204ENST00000432425 ZMIZ1Q9ULJ6 1067 aa6.85□□□□□ -1.31
CLK1-204ENST00000432425 ACIN1Q9UKV3 1341 aaKnown RBP6.85□□□□□ -1.31
CLK1-204ENST00000432425 FOXO3O43524 673 aa6.84□□□□□ -1.31
CLK1-204ENST00000432425 WEE1P30291 646 aa6.84□□□□□ -1.31
CLK1-204ENST00000432425 SRPK2P78362 688 aaKnown RBP6.84□□□□□ -1.31
CLK1-204ENST00000432425 LAMC2Q13753 1193 aa6.84□□□□□ -1.31
CLK1-204ENST00000432425 SWI5Q1ZZU3 235 aa6.84□□□□□ -1.31
CLK1-204ENST00000432425 C7orf43Q8WVR3 580 aa6.84□□□□□ -1.31
CLK1-204ENST00000432425 HSH2DQ96JZ2 352 aa6.84□□□□□ -1.31
CLK1-204ENST00000432425 MARK1Q9P0L2 795 aa6.84□□□□□ -1.31
CLK1-204ENST00000432425 C2CD2LO14523 706 aa6.84□□□□□ -1.32
CLK1-204ENST00000432425 MARSP56192 900 aaKnown RBP6.84□□□□□ -1.32
CLK1-204ENST00000432425 FAM182BQ5T319 152 aa6.84□□□□□ -1.32
CLK1-204ENST00000432425 GOLGA6L1Q8N7Z2 621 aa6.84□□□□□ -1.32
CLK1-204ENST00000432425 NEDD1Q8NHV4 660 aa6.84□□□□□ -1.32
CLK1-204ENST00000432425 STK32AQ8WU08 396 aa6.84□□□□□ -1.32
CLK1-204ENST00000432425 SUSD3Q96L08 255 aa6.84□□□□□ -1.32
CLK1-204ENST00000432425 EFSO43281 561 aa6.83□□□□□ -1.32
CLK1-204ENST00000432425 RTN1Q16799 776 aa6.83□□□□□ -1.32
CLK1-204ENST00000432425 CEP63Q96MT8 703 aa6.83□□□□□ -1.32
CLK1-204ENST00000432425 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.83□□□□□ -1.322e-7■■■■■ 64.8
CLK1-204ENST00000432425 LRRC4BQ9NT99 713 aa6.83□□□□□ -1.32
CLK1-204ENST00000432425 PRR12Q9ULL5 1215 aa6.83□□□□□ -1.32
CLK1-204ENST00000432425 RNF225M0QZC1 329 aaPredicted RBP6.82□□□□□ -1.32
CLK1-204ENST00000432425 OIP5O43482 229 aa6.82□□□□□ -1.32
CLK1-204ENST00000432425 ARAFP10398 606 aa6.82□□□□□ -1.32
CLK1-204ENST00000432425 ZNF280CQ8ND82 737 aa6.82□□□□□ -1.32
CLK1-204ENST00000432425 PRMT3O60678 531 aa6.81□□□□□ -1.32
CLK1-204ENST00000432425 TMEM164Q5U3C3 297 aa6.81□□□□□ -1.32
CLK1-204ENST00000432425 SLCO4C1Q6ZQN7 724 aa6.81□□□□□ -1.32
CLK1-204ENST00000432425 PRIMPOLQ96LW4 560 aa6.81□□□□□ -1.32
CLK1-204ENST00000432425 STRN4Q9NRL3 753 aa6.81□□□□□ -1.32
CLK1-204ENST00000432425 GGA1Q9UJY5 639 aa6.81□□□□□ -1.32
CLK1-204ENST00000432425 GALNT6Q8NCL4 622 aa6.81□□□□□ -1.32
CLK1-204ENST00000432425 C1orf115Q9H7X2 142 aa6.81□□□□□ -1.32
CLK1-204ENST00000432425 BRD7Q9NPI1 651 aa6.81□□□□□ -1.32
CLK1-204ENST00000432425 DNMT3AQ9Y6K1 912 aaPredicted RBP6.81□□□□□ -1.32
CLK1-204ENST00000432425 NEURL1BA8MQ27 555 aa6.8□□□□□ -1.32
CLK1-204ENST00000432425 TYRO3Q06418 890 aa6.8□□□□□ -1.32
CLK1-204ENST00000432425 EDARADDQ8WWZ3 215 aa6.8□□□□□ -1.32
CLK1-204ENST00000432425 SCARF2Q96GP6 870 aaPredicted RBP6.8□□□□□ -1.32
CLK1-204ENST00000432425 AVENQ9NQS1 362 aaPredicted RBP6.8□□□□□ -1.32
CLK1-204ENST00000432425 HCN2Q9UL51 889 aa6.8□□□□□ -1.32
CLK1-204ENST00000432425 ADH6P28332 368 aa6.79□□□□□ -1.32
CLK1-204ENST00000432425 SFSWAPQ12872 951 aaKnown RBP6.79□□□□□ -1.32
CLK1-204ENST00000432425 FKBP5Q13451 457 aaPredicted RBP6.79□□□□□ -1.32
CLK1-204ENST00000432425 ZNF468Q5VIY5 522 aaPredicted RBP6.79□□□□□ -1.32
CLK1-204ENST00000432425 PODNQ7Z5L7 613 aa6.79□□□□□ -1.32
CLK1-204ENST00000432425 BTLAQ7Z6A9 289 aa6.79□□□□□ -1.32
CLK1-204ENST00000432425 TGFBR3LH3BV60 316 aa6.78□□□□□ -1.32
CLK1-204ENST00000432425 PPP1R15AO75807 674 aaPredicted RBP6.78□□□□□ -1.32
CLK1-204ENST00000432425 AMPD1P23109 780 aa6.78□□□□□ -1.32
CLK1-204ENST00000432425 FAM69CQ0P6D2 419 aa6.78□□□□□ -1.32
CLK1-204ENST00000432425 NEUROD1Q13562 356 aa6.78□□□□□ -1.32
CLK1-204ENST00000432425 DGKZQ13574 1117 aa6.78□□□□□ -1.32
CLK1-204ENST00000432425 IER5Q5VY09 327 aa6.78□□□□□ -1.32
CLK1-204ENST00000432425 QTRT2Q9H974 415 aaKnown RBP6.78□□□□□ -1.32
CLK1-204ENST00000432425 KCNH4Q9UQ05 1017 aa6.78□□□□□ -1.32
CLK1-204ENST00000432425 SHISA8B8ZZ34 492 aa6.77□□□□□ -1.32
CLK1-204ENST00000432425 EPXP11678 715 aa6.77□□□□□ -1.32
CLK1-204ENST00000432425 C1orf229Q6ZS94 237 aaPredicted RBP6.77□□□□□ -1.32
CLK1-204ENST00000432425 KRTAP4-8Q9BYQ9 185 aa6.77□□□□□ -1.32
CLK1-204ENST00000432425 RRAGCQ9HB90 399 aa6.77□□□□□ -1.32
CLK1-204ENST00000432425 KLK14Q9P0G3 267 aa6.77□□□□□ -1.32
CLK1-204ENST00000432425 KCNQ4P56696 695 aa6.77□□□□□ -1.33
CLK1-204ENST00000432425 PCBP4P57723 403 aaKnown RBP6.77□□□□□ -1.33
CLK1-204ENST00000432425 SPEM2Q0P670 501 aa6.77□□□□□ -1.33
CLK1-204ENST00000432425 KCNMA1Q12791 1236 aa6.77□□□□□ -1.33
CLK1-204ENST00000432425 OCLNQ16625 522 aa6.77□□□□□ -1.33
CLK1-204ENST00000432425 CLP1Q92989 425 aaKnown RBP6.77□□□□□ -1.33
CLK1-204ENST00000432425 MYO19Q96H55 970 aa6.77□□□□□ -1.33
CLK1-204ENST00000432425 CXXC1Q9P0U4 656 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 414.5 ms