RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 SOS1Q07889 1333 aaPredicted RBP13.9□□□□□ -0.18
SMPD4-205ENST00000431183 HCLS1P14317 486 aaPredicted RBP13.9□□□□□ -0.18
SMPD4-205ENST00000431183 SMC5Q8IY18 1101 aa13.9□□□□□ -0.18
SMPD4-205ENST00000431183 GCC1Q96CN9 775 aa13.9□□□□□ -0.18
SMPD4-205ENST00000431183 TRMT112Q9UI30 125 aaKnown RBP13.9□□□□□ -0.18
SMPD4-205ENST00000431183 SPATA31A1Q5TZJ5 1347 aa13.89□□□□□ -0.19
SMPD4-205ENST00000431183 ERVV-2B6SEH9 535 aa13.89□□□□□ -0.19
SMPD4-205ENST00000431183 IFIT2P09913 472 aaKnown RBP13.89□□□□□ -0.19
SMPD4-205ENST00000431183 HELBQ8NG08 1087 aaPredicted RBP13.89□□□□□ -0.19
SMPD4-205ENST00000431183 TRIM37O94972 964 aa13.89□□□□□ -0.19
SMPD4-205ENST00000431183 GORABQ5T7V8 394 aa13.89□□□□□ -0.19
SMPD4-205ENST00000431183 DZIP3Q86Y13 1208 aaKnown RBP13.89□□□□□ -0.19
SMPD4-205ENST00000431183 LINS1Q8NG48 757 aa13.89□□□□□ -0.19
SMPD4-205ENST00000431183 DNAJC2Q99543 621 aaKnown RBP13.88□□□□□ -0.19
SMPD4-205ENST00000431183 ADCY9O60503 1353 aa13.88□□□□□ -0.19
SMPD4-205ENST00000431183 SEPT12Q8IYM1 358 aa13.88□□□□□ -0.19
SMPD4-205ENST00000431183 SLC4A9Q96Q91 983 aa13.88□□□□□ -0.19
SMPD4-205ENST00000431183 LOC102724428A0A0B4J2F2 783 aa13.88□□□□□ -0.19
SMPD4-205ENST00000431183 NEURL1BA8MQ27 555 aa13.88□□□□□ -0.19
SMPD4-205ENST00000431183 SIK1P57059 783 aa13.88□□□□□ -0.19
SMPD4-205ENST00000431183 CHMP4AQ9BY43 222 aa13.88□□□□□ -0.19
SMPD4-205ENST00000431183 BOLA2Q9H3K6 86 aa13.88□□□□□ -0.19
SMPD4-205ENST00000431183 DCTPP1Q9H773 170 aa13.88□□□□□ -0.19
SMPD4-205ENST00000431183 GCKRQ14397 625 aa13.87□□□□□ -0.19
SMPD4-205ENST00000431183 ATP8B2P98198 1209 aa13.87□□□□□ -0.19
SMPD4-205ENST00000431183 ROBO1Q9Y6N7 1651 aa13.87□□□□□ -0.19
SMPD4-205ENST00000431183 EDC3Q96F86 508 aaKnown RBP13.87□□□□□ -0.19
SMPD4-205ENST00000431183 SNRKQ9NRH2 765 aa13.87□□□□□ -0.19
SMPD4-205ENST00000431183 GNPATO15228 680 aa13.86□□□□□ -0.19
SMPD4-205ENST00000431183 METTL22Q9BUU2 404 aaPredicted RBP13.86□□□□□ -0.19
SMPD4-205ENST00000431183 SNAP23O00161 211 aa13.86□□□□□ -0.19
SMPD4-205ENST00000431183 CLASRPQ8N2M8 674 aaKnown RBP13.86□□□□□ -0.19
SMPD4-205ENST00000431183 HEG1Q9ULI3 1381 aa13.86□□□□□ -0.19
SMPD4-205ENST00000431183 PLEKHM2Q8IWE5 1019 aa13.85□□□□□ -0.19
SMPD4-205ENST00000431183 ANO2Q9NQ90 1003 aa13.85□□□□□ -0.19
SMPD4-205ENST00000431183 CWC25Q9NXE8 425 aaPredicted RBP13.85□□□□□ -0.19
SMPD4-205ENST00000431183 RHPN1Q8TCX5 695 aa13.85□□□□□ -0.19
SMPD4-205ENST00000431183 SLIT3O75094 1523 aa13.85□□□□□ -0.19
SMPD4-205ENST00000431183 CRKLP46109 303 aaKnown RBP13.85□□□□□ -0.19
SMPD4-205ENST00000431183 KCNJ4P48050 445 aa13.84□□□□□ -0.19
SMPD4-205ENST00000431183 TIMM10P62072 90 aa13.84□□□□□ -0.19
SMPD4-205ENST00000431183 LARP6Q9BRS8 491 aaKnown RBP13.84□□□□□ -0.19
SMPD4-205ENST00000431183 SRP68Q9UHB9 627 aaKnown RBP13.84□□□□□ -0.19
SMPD4-205ENST00000431183 IQSEC3Q9UPP2 1182 aaPredicted RBP13.84□□□□□ -0.19
SMPD4-205ENST00000431183 OVOS2A0A0G2JMS6 1433 aa13.84□□□□□ -0.19
SMPD4-205ENST00000431183 MX1P20591 662 aa13.84□□□□□ -0.19
SMPD4-205ENST00000431183 NIP7Q9Y221 180 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMPD4-205ENST00000431183 SDSP20132 328 aa13.84□□□□□ -0.19
SMPD4-205ENST00000431183 BRPF1P55201 1214 aaPredicted RBP13.84□□□□□ -0.19
SMPD4-205ENST00000431183 ITPK1Q13572 414 aa13.84□□□□□ -0.19
SMPD4-205ENST00000431183 CCNL1Q9UK58 526 aaPredicted RBP13.84□□□□□ -0.19
SMPD4-205ENST00000431183 KIF1AQ12756 1690 aa13.84□□□□□ -0.19
SMPD4-205ENST00000431183 SPATA31A5Q5VU36 1347 aa13.84□□□□□ -0.19
SMPD4-205ENST00000431183 SPATA31A7Q8IWB4 1347 aa13.84□□□□□ -0.19
SMPD4-205ENST00000431183 TBC1D9Q6ZT07 1266 aa13.83□□□□□ -0.19
SMPD4-205ENST00000431183 C22orf23Q9BZE7 217 aa13.83□□□□□ -0.19
SMPD4-205ENST00000431183 BABAM1Q9NWV8 329 aa13.83□□□□□ -0.19
SMPD4-205ENST00000431183 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.83□□□□□ -0.19
SMPD4-205ENST00000431183 JCADQ9P266 1359 aa13.83□□□□□ -0.2
SMPD4-205ENST00000431183 CWC27Q6UX04 472 aaKnown RBP13.83□□□□□ -0.2
SMPD4-205ENST00000431183 GJD4Q96KN9 370 aaPredicted RBP13.83□□□□□ -0.2
SMPD4-205ENST00000431183 TLR7Q9NYK1 1049 aaKnown RBP13.83□□□□□ -0.2
SMPD4-205ENST00000431183 GSPT1P15170 499 aaKnown RBP13.83□□□□□ -0.2
SMPD4-205ENST00000431183 PLBD2Q8NHP8 589 aa13.83□□□□□ -0.2
SMPD4-205ENST00000431183 PKNOX2Q96KN3 472 aa13.83□□□□□ -0.2
SMPD4-205ENST00000431183 PUS3Q9BZE2 481 aaKnown RBP13.83□□□□□ -0.2
SMPD4-205ENST00000431183 HOXB7P09629 217 aa13.82□□□□□ -0.2
SMPD4-205ENST00000431183 CCDC57Q2TAC2 916 aa13.82□□□□□ -0.2
SMPD4-205ENST00000431183 CNNM1Q9NRU3 951 aa13.82□□□□□ -0.2
SMPD4-205ENST00000431183 RGS12O14924 1447 aa13.82□□□□□ -0.2
SMPD4-205ENST00000431183 FOXD4L5Q5VV16 416 aaPredicted RBP13.82□□□□□ -0.2
SMPD4-205ENST00000431183 FOXD4L4Q8WXT5 416 aaPredicted RBP13.82□□□□□ -0.2
SMPD4-205ENST00000431183 PDE1AP54750 535 aa13.82□□□□□ -0.2
SMPD4-205ENST00000431183 HSP90AB3PQ58FF7 597 aa13.82□□□□□ -0.2
SMPD4-205ENST00000431183 TFCP2Q12800 502 aa13.81□□□□□ -0.2
SMPD4-205ENST00000431183 AAMPQ13685 434 aa13.81□□□□□ -0.2
SMPD4-205ENST00000431183 XIRP1Q702N8 1843 aaKnown RBP13.81□□□□□ -0.2
SMPD4-205ENST00000431183 FKBP4Q02790 459 aaKnown RBP eCLIP13.81□□□□□ -0.2
SMPD4-205ENST00000431183 LRRC24Q50LG9 513 aa13.81□□□□□ -0.2
SMPD4-205ENST00000431183 CASC1Q6TDU7 716 aa13.81□□□□□ -0.2
SMPD4-205ENST00000431183 STK11IPQ8N1F8 1099 aa13.81□□□□□ -0.2
SMPD4-205ENST00000431183 CHGBP05060 677 aa13.81□□□□□ -0.2
SMPD4-205ENST00000431183 ZNF219Q9P2Y4 722 aaPredicted RBP13.81□□□□□ -0.2
SMPD4-205ENST00000431183 JAG2Q9Y219 1238 aa13.81□□□□□ -0.2
SMPD4-205ENST00000431183 TRPM3Q9HCF6 1732 aaPredicted RBP13.8□□□□□ -0.2
SMPD4-205ENST00000431183 SLFNL1Q499Z3 407 aa13.8□□□□□ -0.2
SMPD4-205ENST00000431183 KLHL34Q8N239 644 aa13.8□□□□□ -0.2
SMPD4-205ENST00000431183 FOXD4L6Q3SYB3 417 aaPredicted RBP13.79□□□□□ -0.2
SMPD4-205ENST00000431183 FOXD4L3Q6VB84 417 aaPredicted RBP13.79□□□□□ -0.2
SMPD4-205ENST00000431183 PALLDQ8WX93 1383 aa13.79□□□□□ -0.2
SMPD4-205ENST00000431183 CYP19A1P11511 503 aaPredicted RBP13.79□□□□□ -0.2
SMPD4-205ENST00000431183 KIF1BPQ96EK5 621 aa13.79□□□□□ -0.2
SMPD4-205ENST00000431183 CCDC87Q9NVE4 849 aa13.79□□□□□ -0.2
SMPD4-205ENST00000431183 ALDH1L1O75891 902 aa13.79□□□□□ -0.2
SMPD4-205ENST00000431183 MSL1Q68DK7 614 aa13.79□□□□□ -0.2
SMPD4-205ENST00000431183 KAZALD1Q96I82 304 aa13.79□□□□□ -0.2
SMPD4-205ENST00000431183 MARF1Q9Y4F3 1742 aaKnown RBP13.79□□□□□ -0.2
SMPD4-205ENST00000431183 IRS4O14654 1257 aaPredicted RBP13.78□□□□□ -0.2
SMPD4-205ENST00000431183 TAF5LO75529 589 aa13.78□□□□□ -0.2
SMPD4-205ENST00000431183 DDX46Q7L014 1031 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms