RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 SLC10A4Q96EP9 437 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 PNMA3Q9UL41 463 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 DKC1O60832 514 aaKnown RBP eCLIP5.29□□□□□ -1.56
LRRK2-204ENST00000430804 TRIM37O94972 964 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 TAF7Q15545 349 aaPredicted RBP5.29□□□□□ -1.56
LRRK2-204ENST00000430804 OLFM4Q6UX06 510 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 COA7Q96BR5 231 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 SMC1AQ14683 1233 aaKnown RBP5.28□□□□□ -1.56
LRRK2-204ENST00000430804 MPNDQ8N594 471 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 NOP56O00567 594 aaKnown RBP5.28□□□□□ -1.56
LRRK2-204ENST00000430804 CCDC73Q6ZRK6 1079 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 TMC4Q7Z404 712 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 CCDC85AQ96PX6 553 aaPredicted RBP5.28□□□□□ -1.56
LRRK2-204ENST00000430804 NAPBQ9H115 298 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 MYBBP1AQ9BQG0 1328 aaKnown RBP5.28□□□□□ -1.56
LRRK2-204ENST00000430804 GRIN2AQ12879 1464 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 VIMP08670 466 aaKnown RBP5.28□□□□□ -1.56
LRRK2-204ENST00000430804 CCDC93Q567U6 631 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 CCDC181Q5TID7 509 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 SEPT12Q8IYM1 358 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 RTKN2Q8IZC4 609 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 TRIM5Q9C035 493 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 AFF2P51816 1311 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 SPATA31A6Q5VVP1 1343 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 TLR3O15455 904 aaKnown RBP5.28□□□□□ -1.56
LRRK2-204ENST00000430804 PRKG1Q13976 671 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 LDHAL6AQ6ZMR3 332 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 ZNF354CQ86Y25 554 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 ABI1Q8IZP0 508 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 ERMNQ8TAM6 284 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 RNF181Q9P0P0 153 aa5.28□□□□□ -1.56
LRRK2-204ENST00000430804 UNC5CLQ8IV45 518 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 KRT23Q9C075 422 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 IMMTQ16891 758 aaKnown RBP5.27□□□□□ -1.57
LRRK2-204ENST00000430804 C1orf228Q6PIY5 440 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 BICD1Q96G01 975 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 ZMYM3Q14202 1370 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 MINDY4BA8MYZ0 360 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 SLC8A3P57103 927 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 NACA2Q9H009 215 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 PODXL2Q9NZ53 605 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 LIG1P18858 919 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 MSNP26038 577 aaKnown RBP5.27□□□□□ -1.57
LRRK2-204ENST00000430804 NLRP5P59047 1200 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 ZBTB3Q9H5J0 574 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 CCDC141Q6ZP82 1450 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 GTPBP6O43824 516 aaPredicted RBP5.27□□□□□ -1.57
LRRK2-204ENST00000430804 UFL1O94874 794 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 DNM2P50570 870 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 FILIP1LQ4L180 1135 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 MSL1Q68DK7 614 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 DPP9Q86TI2 863 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 DBF4Q9UBU7 674 aaPredicted RBP5.27□□□□□ -1.57
LRRK2-204ENST00000430804 JCADQ9P266 1359 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 ZNF518AQ6AHZ1 1483 aa5.27□□□□□ -1.57
LRRK2-204ENST00000430804 FAM161AQ3B820 660 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 GADL1Q6ZQY3 521 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 HOMER1Q86YM7 354 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 CCDC155Q8N6L0 562 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 RAET1EQ8TD07 263 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 MICAL1Q8TDZ2 1067 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 DPF3Q92784 378 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 FAM50BQ9Y247 325 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 CNPY2Q9Y2B0 182 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 RBM19Q9Y4C8 960 aaKnown RBP5.26□□□□□ -1.57
LRRK2-204ENST00000430804 IDI1Q13907 227 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 ERFEQ4G0M1 354 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 PPIP5K1Q6PFW1 1433 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 SMARCC2Q8TAQ2 1214 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 KAT14Q9H8E8 782 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 EFCAB5A4FU69 1503 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 AAMPQ13685 434 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 WAPLQ7Z5K2 1190 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 NBPF15Q8N660 670 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 TANGO6Q9C0B7 1094 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 SIL1Q9H173 461 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 AZI2Q9H6S1 392 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 PHAXQ9H814 394 aaKnown RBP5.26□□□□□ -1.57
LRRK2-204ENST00000430804 RCAN3Q9UKA8 241 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 CEP131Q9UPN4 1083 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 DHX29Q7Z478 1369 aaKnown RBP5.26□□□□□ -1.57
LRRK2-204ENST00000430804 SLC4A2P04920 1241 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 SREBF2Q12772 1141 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 TWISTNBQ3B726 338 aaPredicted RBP5.26□□□□□ -1.57
LRRK2-204ENST00000430804 TBC1D22AQ8WUA7 517 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 GOLGA1Q92805 767 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 POLA1P09884 1462 aaPredicted RBP5.26□□□□□ -1.57
LRRK2-204ENST00000430804 EZRP15311 586 aaKnown RBP5.26□□□□□ -1.57
LRRK2-204ENST00000430804 ATP2B1P20020 1258 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 PICALMQ13492 652 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 ZNF569Q5MCW4 686 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 DZIP1LQ8IYY4 767 aaKnown RBP5.26□□□□□ -1.57
LRRK2-204ENST00000430804 STK11IPQ8N1F8 1099 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 PRPF31Q8WWY3 499 aaKnown RBP5.26□□□□□ -1.57
LRRK2-204ENST00000430804 DCAF5Q96JK2 942 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 TRIM6Q9C030 488 aaPredicted RBP5.26□□□□□ -1.57
LRRK2-204ENST00000430804 LRRC27Q9C0I9 530 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 HECW1Q76N89 1606 aa5.26□□□□□ -1.57
LRRK2-204ENST00000430804 RANBP6O60518 1105 aaKnown RBP5.25□□□□□ -1.57
LRRK2-204ENST00000430804 UTP14CQ5TAP6 766 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms