RNA–Protein interactions for RNA: ENST00000430198.2

HMGA1P2-201, Transcript of high mobility group AT-hook 1 pseudogene 2, humanhuman

BASIC

Gene HMGA1P2, Length 324 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P2-201ENST00000430198 CNGB1Q14028 1251 aaPredicted RBP16.65■□□□□ 0.26
HMGA1P2-201ENST00000430198 EAPPQ56P03 285 aaPredicted RBP16.65■□□□□ 0.26
HMGA1P2-201ENST00000430198 TTC5Q8N0Z6 440 aa16.65■□□□□ 0.26
HMGA1P2-201ENST00000430198 CNBD1Q8NA66 436 aa16.65■□□□□ 0.26
HMGA1P2-201ENST00000430198 CNKSR1Q969H4 720 aa16.65■□□□□ 0.26
HMGA1P2-201ENST00000430198 PCGF6Q9BYE7 350 aa16.65■□□□□ 0.26
HMGA1P2-201ENST00000430198 PRDM10Q9NQV6 1147 aa16.65■□□□□ 0.26
HMGA1P2-201ENST00000430198 PER1O15534 1290 aaPredicted RBP16.64■□□□□ 0.25
HMGA1P2-201ENST00000430198 DIAPH1O60610 1272 aaKnown RBP16.64■□□□□ 0.25
HMGA1P2-201ENST00000430198 MAP1SQ66K74 1059 aaPredicted RBP16.64■□□□□ 0.25
HMGA1P2-201ENST00000430198 LDHDQ86WU2 507 aa16.64■□□□□ 0.25
HMGA1P2-201ENST00000430198 MASTLQ96GX5 879 aa16.64■□□□□ 0.25
HMGA1P2-201ENST00000430198 L3MBTL3Q96JM7 780 aaPredicted RBP16.64■□□□□ 0.25
HMGA1P2-201ENST00000430198 PHACTR3Q96KR7 559 aa16.64■□□□□ 0.25
HMGA1P2-201ENST00000430198 TMEM88BA6NKF7 163 aa16.63■□□□□ 0.25
HMGA1P2-201ENST00000430198 CC2D1BQ5T0F9 858 aaKnown RBP16.63■□□□□ 0.25
HMGA1P2-201ENST00000430198 CLEC11AQ9Y240 323 aa16.63■□□□□ 0.25
HMGA1P2-201ENST00000430198 FAM177BA6PVY3 158 aa16.62■□□□□ 0.25
HMGA1P2-201ENST00000430198 CTCFP49711 727 aaPredicted RBP16.62■□□□□ 0.25
HMGA1P2-201ENST00000430198 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
HMGA1P2-201ENST00000430198 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
HMGA1P2-201ENST00000430198 PDZRN3Q9UPQ7 1066 aa16.62■□□□□ 0.25
HMGA1P2-201ENST00000430198 HSPA8P11142 646 aaKnown RBP16.61■□□□□ 0.25
HMGA1P2-201ENST00000430198 TEFQ10587 303 aa16.61■□□□□ 0.25
HMGA1P2-201ENST00000430198 SCN7AQ01118 1682 aa16.6■□□□□ 0.25
HMGA1P2-201ENST00000430198 KLRG2A4D1S0 409 aaPredicted RBP16.6■□□□□ 0.25
HMGA1P2-201ENST00000430198 GNAT3A8MTJ3 354 aa16.6■□□□□ 0.25
HMGA1P2-201ENST00000430198 NBPF26B4DH59 902 aa16.6■□□□□ 0.25
HMGA1P2-201ENST00000430198 EPHX2P34913 555 aa16.6■□□□□ 0.25
HMGA1P2-201ENST00000430198 NBPF10Q6P3W6 841 aaKnown RBP16.6■□□□□ 0.25
HMGA1P2-201ENST00000430198 CNTROBQ8N137 903 aa16.6■□□□□ 0.25
HMGA1P2-201ENST00000430198 NBPF15Q8N660 670 aa16.6■□□□□ 0.25
HMGA1P2-201ENST00000430198 TEX13AQ9BXU3 409 aaPredicted RBP16.6■□□□□ 0.25
HMGA1P2-201ENST00000430198 RNF123Q5XPI4 1314 aa16.6■□□□□ 0.25
HMGA1P2-201ENST00000430198 IQCA1LA6NCM1 817 aa16.59■□□□□ 0.25
HMGA1P2-201ENST00000430198 U2SURPO15042 1029 aaKnown RBP16.59■□□□□ 0.25
HMGA1P2-201ENST00000430198 NPHP1O15259 732 aa16.59■□□□□ 0.25
HMGA1P2-201ENST00000430198 ST5P78524 1137 aa16.59■□□□□ 0.25
HMGA1P2-201ENST00000430198 DEFB115Q30KQ5 88 aa16.59■□□□□ 0.25
HMGA1P2-201ENST00000430198 NBPF5PQ86XG9 351 aaPredicted RBP16.59■□□□□ 0.25
HMGA1P2-201ENST00000430198 SYNE4Q8N205 404 aa16.59■□□□□ 0.25
HMGA1P2-201ENST00000430198 ABHD8Q96I13 439 aa16.59■□□□□ 0.25
HMGA1P2-201ENST00000430198 FMNL2Q96PY5 1086 aa16.59■□□□□ 0.25
HMGA1P2-201ENST00000430198 HACL1Q9UJ83 578 aa16.59■□□□□ 0.25
HMGA1P2-201ENST00000430198 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
HMGA1P2-201ENST00000430198 HLFQ16534 295 aa16.58■□□□□ 0.24
HMGA1P2-201ENST00000430198 SIPA1L3O60292 1781 aaPredicted RBP16.58■□□□□ 0.24
HMGA1P2-201ENST00000430198 SCN4AP35499 1836 aa16.57■□□□□ 0.24
HMGA1P2-201ENST00000430198 ADAMTSL1Q8N6G6 1762 aa16.57■□□□□ 0.24
HMGA1P2-201ENST00000430198 COL4A5P29400 1685 aa16.57■□□□□ 0.24
HMGA1P2-201ENST00000430198 KIF7Q2M1P5 1343 aa16.57■□□□□ 0.24
HMGA1P2-201ENST00000430198 WDR33Q9C0J8 1336 aaKnown RBP16.57■□□□□ 0.24
HMGA1P2-201ENST00000430198 RASSF10A6NK89 507 aa16.57■□□□□ 0.24
HMGA1P2-201ENST00000430198 BTBD11A6QL63 1104 aa16.57■□□□□ 0.24
HMGA1P2-201ENST00000430198 FZD9O00144 591 aa16.57■□□□□ 0.24
HMGA1P2-201ENST00000430198 NPR1P16066 1061 aa16.57■□□□□ 0.24
HMGA1P2-201ENST00000430198 FAM161AQ3B820 660 aa16.57■□□□□ 0.24
HMGA1P2-201ENST00000430198 CCDC93Q567U6 631 aa16.57■□□□□ 0.24
HMGA1P2-201ENST00000430198 AIDAQ96BJ3 306 aa16.57■□□□□ 0.24
HMGA1P2-201ENST00000430198 COL3A1P02461 1466 aaPredicted RBP16.55■□□□□ 0.24
HMGA1P2-201ENST00000430198 SLC34A2O95436 690 aa16.55■□□□□ 0.24
HMGA1P2-201ENST00000430198 DCTN1Q14203 1278 aa16.55■□□□□ 0.24
HMGA1P2-201ENST00000430198 TSKSQ9UJT2 592 aa16.55■□□□□ 0.24
HMGA1P2-201ENST00000430198 ARFGEF2Q9Y6D5 1785 aa16.55■□□□□ 0.24
HMGA1P2-201ENST00000430198 CEMIPQ8WUJ3 1361 aa16.54■□□□□ 0.24
HMGA1P2-201ENST00000430198 TRAF5O00463 557 aa16.54■□□□□ 0.24
HMGA1P2-201ENST00000430198 IARSP41252 1262 aaKnown RBP16.54■□□□□ 0.24
HMGA1P2-201ENST00000430198 EPS15P42566 896 aa16.54■□□□□ 0.24
HMGA1P2-201ENST00000430198 SOGA3Q5TF21 947 aa16.54■□□□□ 0.24
HMGA1P2-201ENST00000430198 CST9Q5W186 159 aa16.54■□□□□ 0.24
HMGA1P2-201ENST00000430198 MCM10Q7L590 875 aa16.54■□□□□ 0.24
HMGA1P2-201ENST00000430198 MIS18AQ9NYP9 233 aa16.54■□□□□ 0.24
HMGA1P2-201ENST00000430198 NIP7Q9Y221 180 aaKnown RBP eCLIP16.54■□□□□ 0.24
HMGA1P2-201ENST00000430198 LTBP1Q14766 1721 aa16.53■□□□□ 0.24
HMGA1P2-201ENST00000430198 CLEC4GQ6UXB4 293 aa16.53■□□□□ 0.24
HMGA1P2-201ENST00000430198 GAS2L2Q8NHY3 880 aa16.53■□□□□ 0.24
HMGA1P2-201ENST00000430198 DDX21Q9NR30 783 aaKnown RBP eCLIP16.53■□□□□ 0.24
HMGA1P2-201ENST00000430198 ABT1Q9ULW3 272 aaKnown RBP16.53■□□□□ 0.24
HMGA1P2-201ENST00000430198 GJA3Q9Y6H8 435 aa16.53■□□□□ 0.24
HMGA1P2-201ENST00000430198 BCORQ6W2J9 1755 aa16.53■□□□□ 0.24
HMGA1P2-201ENST00000430198 SNED1Q8TER0 1413 aa16.53■□□□□ 0.24
HMGA1P2-201ENST00000430198 PRKAR2BP31323 418 aa16.52■□□□□ 0.24
HMGA1P2-201ENST00000430198 GRM1Q13255 1194 aa16.52■□□□□ 0.24
HMGA1P2-201ENST00000430198 CYP4F22Q6NT55 531 aa16.52■□□□□ 0.24
HMGA1P2-201ENST00000430198 TPTE2Q6XPS3 522 aa16.52■□□□□ 0.24
HMGA1P2-201ENST00000430198 NUTM1Q86Y26 1132 aa16.52■□□□□ 0.24
HMGA1P2-201ENST00000430198 TCERG1O14776 1098 aaKnown RBP16.51■□□□□ 0.23
HMGA1P2-201ENST00000430198 AOC2O75106 756 aa16.51■□□□□ 0.23
HMGA1P2-201ENST00000430198 NPM2Q86SE8 214 aaKnown RBP16.51■□□□□ 0.23
HMGA1P2-201ENST00000430198 RTKN2Q8IZC4 609 aa16.51■□□□□ 0.23
HMGA1P2-201ENST00000430198 NGEFQ8N5V2 710 aa16.51■□□□□ 0.23
HMGA1P2-201ENST00000430198 RSPH6AQ9H0K4 717 aa16.51■□□□□ 0.23
HMGA1P2-201ENST00000430198 CCDC85CA6NKD9 419 aa16.5■□□□□ 0.23
HMGA1P2-201ENST00000430198 SNRPA1P09661 255 aaKnown RBP16.5■□□□□ 0.23
HMGA1P2-201ENST00000430198 SCNN1DP51172 638 aa16.5■□□□□ 0.23
HMGA1P2-201ENST00000430198 C3orf67Q6ZVT6 689 aa16.5■□□□□ 0.23
HMGA1P2-201ENST00000430198 PNMA8AQ86V59 439 aaPredicted RBP16.5■□□□□ 0.23
HMGA1P2-201ENST00000430198 GPC2Q8N158 579 aa16.5■□□□□ 0.23
HMGA1P2-201ENST00000430198 CAPNS2Q96L46 248 aa16.5■□□□□ 0.23
HMGA1P2-201ENST00000430198 ABCC12Q96J65 1359 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms