RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 HSP90AA1P07900 732 aaKnown RBP17.08■□□□□ 0.33
RBM39-212ENST00000429968 XAGE3Q8WTP9 111 aa17.08■□□□□ 0.33
RBM39-212ENST00000429968 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.08■□□□□ 0.332e-26■■■□□ 15.2
RBM39-212ENST00000429968 LAMB4A4D0S4 1761 aa17.08■□□□□ 0.32
RBM39-212ENST00000429968 PKP1Q13835 747 aa17.08■□□□□ 0.32
RBM39-212ENST00000429968 GZF1Q9H116 711 aaPredicted RBP17.08■□□□□ 0.32
RBM39-212ENST00000429968 BICC1Q9H694 974 aaKnown RBP17.08■□□□□ 0.32
RBM39-212ENST00000429968 AOX1Q06278 1338 aa17.07■□□□□ 0.32
RBM39-212ENST00000429968 GRM8O00222 908 aa17.07■□□□□ 0.32
RBM39-212ENST00000429968 COPS6Q7L5N1 327 aa17.07■□□□□ 0.32
RBM39-212ENST00000429968 LINS1Q8NG48 757 aa17.07■□□□□ 0.32
RBM39-212ENST00000429968 JARID2Q92833 1246 aaPredicted RBP17.07■□□□□ 0.32
RBM39-212ENST00000429968 CIZ1Q9ULV3 898 aaPredicted RBP17.07■□□□□ 0.32
RBM39-212ENST00000429968 ZGPATQ8N5A5 531 aaKnown RBP17.06■□□□□ 0.32
RBM39-212ENST00000429968 UTYO14607 1347 aa17.06■□□□□ 0.32
RBM39-212ENST00000429968 KDM4FA0A1W2PPD8 638 aa17.06■□□□□ 0.32
RBM39-212ENST00000429968 EPHA10Q5JZY3 1008 aa17.06■□□□□ 0.32
RBM39-212ENST00000429968 DCAF5Q96JK2 942 aa17.06■□□□□ 0.32
RBM39-212ENST00000429968 ANO2Q9NQ90 1003 aa17.06■□□□□ 0.32
RBM39-212ENST00000429968 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
RBM39-212ENST00000429968 TRAK2O60296 914 aa17.05■□□□□ 0.32
RBM39-212ENST00000429968 KLHDC4Q8TBB5 520 aa17.05■□□□□ 0.32
RBM39-212ENST00000429968 ANO8Q9HCE9 1232 aaPredicted RBP17.05■□□□□ 0.32
RBM39-212ENST00000429968 COL5A2P05997 1499 aaPredicted RBP17.05■□□□□ 0.32
RBM39-212ENST00000429968 RIC3Q7Z5B4 369 aa17.05■□□□□ 0.32
RBM39-212ENST00000429968 NEURL1BA8MQ27 555 aa17.04■□□□□ 0.32
RBM39-212ENST00000429968 MYD88Q99836 296 aa17.04■□□□□ 0.32
RBM39-212ENST00000429968 SOS2Q07890 1332 aaPredicted RBP17.04■□□□□ 0.32
RBM39-212ENST00000429968 SASH1O94885 1247 aa17.03■□□□□ 0.32
RBM39-212ENST00000429968 OS9Q13438 667 aaPredicted RBP17.03■□□□□ 0.32
RBM39-212ENST00000429968 PRDM11Q9NQV5 511 aa17.03■□□□□ 0.32
RBM39-212ENST00000429968 TOGARAM1Q9Y4F4 1720 aa17.03■□□□□ 0.32
RBM39-212ENST00000429968 DHX37Q8IY37 1157 aaKnown RBP17.03■□□□□ 0.32
RBM39-212ENST00000429968 SLAIN2Q9P270 581 aa17.03■□□□□ 0.32
RBM39-212ENST00000429968 WDR17Q8IZU2 1322 aa17.03■□□□□ 0.32
RBM39-212ENST00000429968 USP42Q9H9J4 1324 aaKnown RBP17.03■□□□□ 0.32
RBM39-212ENST00000429968 PAPPAQ13219 1627 aa17.02■□□□□ 0.31
RBM39-212ENST00000429968 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.31
RBM39-212ENST00000429968 SNRPA1P09661 255 aaKnown RBP17.02■□□□□ 0.31
RBM39-212ENST00000429968 NEK4P51957 841 aa17.02■□□□□ 0.31
RBM39-212ENST00000429968 CABP4P57796 275 aa17.02■□□□□ 0.31
RBM39-212ENST00000429968 TLR7Q9NYK1 1049 aaKnown RBP17.02■□□□□ 0.31
RBM39-212ENST00000429968 NUP188Q5SRE5 1749 aa17.01■□□□□ 0.31
RBM39-212ENST00000429968 GCKRQ14397 625 aa17.01■□□□□ 0.31
RBM39-212ENST00000429968 TOM1L2Q6ZVM7 507 aa17.01■□□□□ 0.31
RBM39-212ENST00000429968 TTC5Q8N0Z6 440 aa17.01■□□□□ 0.31
RBM39-212ENST00000429968 METTL22Q9BUU2 404 aaPredicted RBP17.01■□□□□ 0.31
RBM39-212ENST00000429968 SIL1Q9H173 461 aa17.01■□□□□ 0.31
RBM39-212ENST00000429968 ST18O60284 1047 aa17■□□□□ 0.31
RBM39-212ENST00000429968 CYP2E1P05181 493 aaPredicted RBP17■□□□□ 0.31
RBM39-212ENST00000429968 FGD1P98174 961 aa17■□□□□ 0.31
RBM39-212ENST00000429968 LARP1Q6PKG0 1096 aaKnown RBP17■□□□□ 0.31
RBM39-212ENST00000429968 CHAMP1Q96JM3 812 aa17■□□□□ 0.31
RBM39-212ENST00000429968 KCPQ6ZWJ8 1503 aa17■□□□□ 0.31
RBM39-212ENST00000429968 DDX11L8A8MPP1 907 aa17■□□□□ 0.31
RBM39-212ENST00000429968 NBPF26B4DH59 902 aa17■□□□□ 0.31
RBM39-212ENST00000429968 SGSM2O43147 1006 aa17■□□□□ 0.31
RBM39-212ENST00000429968 CDK11BP21127 795 aaKnown RBP17■□□□□ 0.31
RBM39-212ENST00000429968 NBPF14Q5TI25 921 aa17■□□□□ 0.31
RBM39-212ENST00000429968 NBPF10Q6P3W6 841 aaKnown RBP17■□□□□ 0.31
RBM39-212ENST00000429968 NOL8Q76FK4 1167 aaKnown RBP17■□□□□ 0.31
RBM39-212ENST00000429968 NBPF15Q8N660 670 aa17■□□□□ 0.31
RBM39-212ENST00000429968 EAF2Q96CJ1 260 aaPredicted RBP17■□□□□ 0.31
RBM39-212ENST00000429968 FMNL2Q96PY5 1086 aa17■□□□□ 0.31
RBM39-212ENST00000429968 UPF3BQ9BZI7 483 aaKnown RBP17■□□□□ 0.31
RBM39-212ENST00000429968 NHSL1Q5SYE7 1610 aa16.99■□□□□ 0.31
RBM39-212ENST00000429968 TJP1Q07157 1748 aa16.99■□□□□ 0.31
RBM39-212ENST00000429968 ATP5J2-PTCD1G3V325 749 aa16.99■□□□□ 0.31
RBM39-212ENST00000429968 PTCD1O75127 700 aaKnown RBP16.99■□□□□ 0.31
RBM39-212ENST00000429968 ANKRD13DQ6ZTN6 518 aa16.99■□□□□ 0.31
RBM39-212ENST00000429968 BCL11BQ9C0K0 894 aaPredicted RBP16.99■□□□□ 0.31
RBM39-212ENST00000429968 ZDHHC9Q9Y397 364 aa16.99■□□□□ 0.31
RBM39-212ENST00000429968 HSP90AB4PQ58FF6 505 aa16.99■□□□□ 0.31
RBM39-212ENST00000429968 CWC27Q6UX04 472 aaKnown RBP16.99■□□□□ 0.31
RBM39-212ENST00000429968 AACSQ86V21 672 aa16.99■□□□□ 0.31
RBM39-212ENST00000429968 TMX3Q96JJ7 454 aa16.99■□□□□ 0.31
RBM39-212ENST00000429968 CLASRPQ8N2M8 674 aaKnown RBP16.98■□□□□ 0.31
RBM39-212ENST00000429968 ZCRB1Q8TBF4 217 aaKnown RBP16.98■□□□□ 0.31
RBM39-212ENST00000429968 LSG1Q9H089 658 aaKnown RBP16.98■□□□□ 0.31
RBM39-212ENST00000429968 CCDC8Q9H0W5 538 aaPredicted RBP16.98■□□□□ 0.31
RBM39-212ENST00000429968 PLEKHG2Q9H7P9 1386 aa16.97■□□□□ 0.31
RBM39-212ENST00000429968 TTC41PQ6P2S7 1318 aa16.97■□□□□ 0.31
RBM39-212ENST00000429968 HSPA4P34932 840 aa16.97■□□□□ 0.31
RBM39-212ENST00000429968 RAD50Q92878 1312 aa16.97■□□□□ 0.31
RBM39-212ENST00000429968 BAG4O95429 457 aaKnown RBP16.97■□□□□ 0.31
RBM39-212ENST00000429968 RASEFQ8IZ41 740 aa16.97■□□□□ 0.31
RBM39-212ENST00000429968 CNTROBQ8N137 903 aa16.97■□□□□ 0.31
RBM39-212ENST00000429968 IL17RAQ96F46 866 aa16.97■□□□□ 0.31
RBM39-212ENST00000429968 STRN4Q9NRL3 753 aa16.97■□□□□ 0.31
RBM39-212ENST00000429968 FSD2A1L4K1 749 aa16.96■□□□□ 0.31
RBM39-212ENST00000429968 UBE3BQ7Z3V4 1068 aa16.96■□□□□ 0.31
RBM39-212ENST00000429968 GBP4Q96PP9 640 aa16.96■□□□□ 0.31
RBM39-212ENST00000429968 ECHDC1Q9NTX5 307 aa16.96■□□□□ 0.31
RBM39-212ENST00000429968 PCDH11XQ9BZA7 1347 aa16.96■□□□□ 0.31
RBM39-212ENST00000429968 PCDH11YQ9BZA8 1340 aa16.96■□□□□ 0.31
RBM39-212ENST00000429968 GLRX3O76003 335 aaKnown RBP16.96■□□□□ 0.3
RBM39-212ENST00000429968 NEXNQ0ZGT2 675 aa16.96■□□□□ 0.3
RBM39-212ENST00000429968 TTLL7Q6ZT98 887 aa16.96■□□□□ 0.3
RBM39-212ENST00000429968 IFIT2P09913 472 aaKnown RBP16.95■□□□□ 0.3
RBM39-212ENST00000429968 RFX5P48382 616 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms