RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 COL17A1Q9UMD9 1497 aaPredicted RBP20.2■□□□□ 0.82
SMARCA4-203ENST00000429416 TTF1Q15361 905 aaPredicted RBP20.2■□□□□ 0.82
SMARCA4-203ENST00000429416 ATP2B3Q16720 1220 aa20.2■□□□□ 0.82
SMARCA4-203ENST00000429416 HELBQ8NG08 1087 aaPredicted RBP20.2■□□□□ 0.82
SMARCA4-203ENST00000429416 PRPF40BQ6NWY9 871 aaKnown RBP20.19■□□□□ 0.82
SMARCA4-203ENST00000429416 ZNF213O14771 459 aa20.19■□□□□ 0.82
SMARCA4-203ENST00000429416 EIF2AK4Q9P2K8 1649 aaKnown RBP20.19■□□□□ 0.82
SMARCA4-203ENST00000429416 SBNO1A3KN83 1393 aa20.19■□□□□ 0.82
SMARCA4-203ENST00000429416 ZNF790Q6PG37 636 aa20.19■□□□□ 0.82
SMARCA4-203ENST00000429416 ECHDC1Q9NTX5 307 aa20.18■□□□□ 0.82
SMARCA4-203ENST00000429416 GJA3Q9Y6H8 435 aa20.18■□□□□ 0.82
SMARCA4-203ENST00000429416 CWF19L2Q2TBE0 894 aaKnown RBP20.18■□□□□ 0.82
SMARCA4-203ENST00000429416 NOL7Q9UMY1 257 aaKnown RBP20.18■□□□□ 0.82
SMARCA4-203ENST00000429416 UGGT1Q9NYU2 1555 aa20.18■□□□□ 0.82
SMARCA4-203ENST00000429416 EDC4Q6P2E9 1401 aaKnown RBP20.18■□□□□ 0.82
SMARCA4-203ENST00000429416 CASTP20810 708 aaKnown RBP20.18■□□□□ 0.82
SMARCA4-203ENST00000429416 ZNF772Q68DY9 489 aaPredicted RBP20.18■□□□□ 0.82
SMARCA4-203ENST00000429416 ZNF396Q96N95 335 aaPredicted RBP20.18■□□□□ 0.82
SMARCA4-203ENST00000429416 OLFM4Q6UX06 510 aa20.17■□□□□ 0.82
SMARCA4-203ENST00000429416 ZNF804AQ7Z570 1209 aa20.17■□□□□ 0.82
SMARCA4-203ENST00000429416 CCDC24Q8N4L8 307 aa20.17■□□□□ 0.82
SMARCA4-203ENST00000429416 ABCA8O94911 1581 aa20.17■□□□□ 0.82
SMARCA4-203ENST00000429416 FIBPO43427 364 aa20.17■□□□□ 0.82
SMARCA4-203ENST00000429416 UQCRFS1P1P0C7P4 283 aa20.17■□□□□ 0.82
SMARCA4-203ENST00000429416 CTCFLQ8NI51 663 aaPredicted RBP20.17■□□□□ 0.82
SMARCA4-203ENST00000429416 MYO5CQ9NQX4 1742 aa20.17■□□□□ 0.82
SMARCA4-203ENST00000429416 MAGI2Q86UL8 1455 aa20.17■□□□□ 0.82
SMARCA4-203ENST00000429416 MEIS3Q99687 375 aa20.17■□□□□ 0.82
SMARCA4-203ENST00000429416 PICALMQ13492 652 aa20.16■□□□□ 0.82
SMARCA4-203ENST00000429416 LMOD1P29536 600 aaPredicted RBP20.16■□□□□ 0.82
SMARCA4-203ENST00000429416 ERCC6L2Q5T890 1561 aa20.16■□□□□ 0.82
SMARCA4-203ENST00000429416 ADGRL2O95490 1459 aa20.16■□□□□ 0.82
SMARCA4-203ENST00000429416 PLEKHG3A1L390 1219 aa20.16■□□□□ 0.82
SMARCA4-203ENST00000429416 CT47A1Q5JQC4 288 aaPredicted RBP20.16■□□□□ 0.82
SMARCA4-203ENST00000429416 DDX11Q96FC9 970 aa20.16■□□□□ 0.82
SMARCA4-203ENST00000429416 GSTO1P78417 241 aa20.16■□□□□ 0.82
SMARCA4-203ENST00000429416 LGR6Q9HBX8 967 aa20.16■□□□□ 0.82
SMARCA4-203ENST00000429416 OFD1O75665 1012 aa20.15■□□□□ 0.82
SMARCA4-203ENST00000429416 MSL1Q68DK7 614 aa20.15■□□□□ 0.82
SMARCA4-203ENST00000429416 LARP1BQ659C4 914 aaKnown RBP20.15■□□□□ 0.82
SMARCA4-203ENST00000429416 RNF41Q9H4P4 317 aaPredicted RBP20.15■□□□□ 0.82
SMARCA4-203ENST00000429416 JAG2Q9Y219 1238 aa20.15■□□□□ 0.82
SMARCA4-203ENST00000429416 FAM182BQ5T319 152 aa20.15■□□□□ 0.82
SMARCA4-203ENST00000429416 A0A0U1RQG5 324 aaPredicted RBP20.15■□□□□ 0.82
SMARCA4-203ENST00000429416 KINO60870 393 aaKnown RBP20.15■□□□□ 0.82
SMARCA4-203ENST00000429416 ALDH1L1O75891 902 aa20.15■□□□□ 0.82
SMARCA4-203ENST00000429416 NF2P35240 595 aa20.15■□□□□ 0.82
SMARCA4-203ENST00000429416 TSHZ3Q63HK5 1081 aa20.15■□□□□ 0.82
SMARCA4-203ENST00000429416 JMYQ8N9B5 988 aa20.15■□□□□ 0.82
SMARCA4-203ENST00000429416 LINS1Q8NG48 757 aa20.14■□□□□ 0.82
SMARCA4-203ENST00000429416 RBM17Q96I25 401 aaKnown RBP20.14■□□□□ 0.82
SMARCA4-203ENST00000429416 EYA3Q99504 573 aa20.14■□□□□ 0.82
SMARCA4-203ENST00000429416 TSPY2A6NKD2 308 aa20.14■□□□□ 0.81
SMARCA4-203ENST00000429416 A1BGP04217 495 aa20.14■□□□□ 0.81
SMARCA4-203ENST00000429416 DNAJC10Q8IXB1 793 aa20.14■□□□□ 0.81
SMARCA4-203ENST00000429416 FAM89AQ96GI7 184 aa20.14■□□□□ 0.81
SMARCA4-203ENST00000429416 METP08581 1390 aa20.14■□□□□ 0.81
SMARCA4-203ENST00000429416 ZFYVE9O95405 1425 aa20.14■□□□□ 0.81
SMARCA4-203ENST00000429416 ECM2O94769 699 aaPredicted RBP20.13■□□□□ 0.81
SMARCA4-203ENST00000429416 EFCAB6Q5THR3 1501 aa20.13■□□□□ 0.81
SMARCA4-203ENST00000429416 CYP7A1P22680 504 aa20.13■□□□□ 0.81
SMARCA4-203ENST00000429416 CRNKL1Q9BZJ0 848 aaKnown RBP20.13■□□□□ 0.81
SMARCA4-203ENST00000429416 CCDC87Q9NVE4 849 aa20.13■□□□□ 0.81
SMARCA4-203ENST00000429416 IFIT3O14879 490 aaKnown RBP20.13■□□□□ 0.81
SMARCA4-203ENST00000429416 PIK3C2GO75747 1445 aa20.13■□□□□ 0.81
SMARCA4-203ENST00000429416 HCLS1P14317 486 aaPredicted RBP20.13■□□□□ 0.81
SMARCA4-203ENST00000429416 PLEKHG1Q9ULL1 1385 aa20.12■□□□□ 0.81
SMARCA4-203ENST00000429416 DEKP35659 375 aaKnown RBP20.12■□□□□ 0.81
SMARCA4-203ENST00000429416 HAND2P61296 217 aa20.12■□□□□ 0.81
SMARCA4-203ENST00000429416 ZGPATQ8N5A5 531 aaKnown RBP20.12■□□□□ 0.81
SMARCA4-203ENST00000429416 ME1P48163 572 aa20.12■□□□□ 0.81
SMARCA4-203ENST00000429416 PDE4BQ07343 736 aa20.12■□□□□ 0.81
SMARCA4-203ENST00000429416 GPR162Q16538 588 aa20.12■□□□□ 0.81
SMARCA4-203ENST00000429416 GLIPR1L2Q4G1C9 344 aa20.12■□□□□ 0.81
SMARCA4-203ENST00000429416 TSPYL6Q8N831 410 aa20.12■□□□□ 0.81
SMARCA4-203ENST00000429416 SCLT1Q96NL6 688 aa20.12■□□□□ 0.81
SMARCA4-203ENST00000429416 UPF3BQ9BZI7 483 aaKnown RBP20.12■□□□□ 0.81
SMARCA4-203ENST00000429416 VAT1LQ9HCJ6 419 aa20.12■□□□□ 0.81
SMARCA4-203ENST00000429416 KDM6BO15054 1643 aa20.12■□□□□ 0.81
SMARCA4-203ENST00000429416 H0YIN7 160 aa20.11■□□□□ 0.81
SMARCA4-203ENST00000429416 SLC52A2Q9HAB3 445 aa20.11■□□□□ 0.81
SMARCA4-203ENST00000429416 ZCCHC11Q5TAX3 1644 aaKnown RBP20.11■□□□□ 0.81
SMARCA4-203ENST00000429416 PHAXQ9H814 394 aaKnown RBP20.11■□□□□ 0.81
SMARCA4-203ENST00000429416 ZFYVE27Q5T4F4 411 aa20.11■□□□□ 0.81
SMARCA4-203ENST00000429416 CCAR2Q8N163 923 aaKnown RBP20.11■□□□□ 0.81
SMARCA4-203ENST00000429416 WASF1Q92558 559 aa20.11■□□□□ 0.81
SMARCA4-203ENST00000429416 RSPH6AQ9H0K4 717 aa20.11■□□□□ 0.81
SMARCA4-203ENST00000429416 TRIM37O94972 964 aa20.11■□□□□ 0.81
SMARCA4-203ENST00000429416 EVI5LQ96CN4 794 aa20.11■□□□□ 0.81
SMARCA4-203ENST00000429416 MAGI3Q5TCQ9 1506 aa20.11■□□□□ 0.81
SMARCA4-203ENST00000429416 IL15P40933 162 aaPredicted RBP20.11■□□□□ 0.81
SMARCA4-203ENST00000429416 PA2G4Q9UQ80 394 aaKnown RBP20.1■□□□□ 0.81
SMARCA4-203ENST00000429416 ODF2Q5BJF6 829 aa20.1■□□□□ 0.81
SMARCA4-203ENST00000429416 STX8Q9UNK0 236 aa20.1■□□□□ 0.81
SMARCA4-203ENST00000429416 SLC12A7Q9Y666 1083 aa20.1■□□□□ 0.81
SMARCA4-203ENST00000429416 POLR3AO14802 1390 aaPredicted RBP20.1■□□□□ 0.81
SMARCA4-203ENST00000429416 TNIP1Q15025 636 aa20.1■□□□□ 0.81
SMARCA4-203ENST00000429416 NAA16Q6N069 864 aaPredicted RBP20.1■□□□□ 0.81
SMARCA4-203ENST00000429416 RHPN1Q8TCX5 695 aa20.1■□□□□ 0.81
SMARCA4-203ENST00000429416 CUL5Q93034 780 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms