RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ZBTB1Q9Y2K1 713 aa11.25□□□□□ -0.61
SMC6-204ENST00000428868 ERBB4Q15303 1308 aa11.25□□□□□ -0.61
SMC6-204ENST00000428868 LAMB2P55268 1798 aa11.24□□□□□ -0.61
SMC6-204ENST00000428868 SPEF2Q9C093 1822 aa11.24□□□□□ -0.61
SMC6-204ENST00000428868 ATP6V1AP38606 617 aa11.24□□□□□ -0.61
SMC6-204ENST00000428868 BEND3Q5T5X7 828 aa11.24□□□□□ -0.61
SMC6-204ENST00000428868 KSR2Q6VAB6 950 aa11.24□□□□□ -0.61
SMC6-204ENST00000428868 LINC00116Q8NCU8 138 aa11.24□□□□□ -0.61
SMC6-204ENST00000428868 DDX60Q8IY21 1712 aaKnown RBP11.23□□□□□ -0.61
SMC6-204ENST00000428868 CCT4P50991 539 aaKnown RBP11.23□□□□□ -0.61
SMC6-204ENST00000428868 CWF19L2Q2TBE0 894 aaKnown RBP11.23□□□□□ -0.61
SMC6-204ENST00000428868 TRIM37O94972 964 aa11.22□□□□□ -0.61
SMC6-204ENST00000428868 IGKV5-2P06315 115 aa11.22□□□□□ -0.61
SMC6-204ENST00000428868 COL24A1Q17RW2 1714 aa11.22□□□□□ -0.61
SMC6-204ENST00000428868 INTS5Q6P9B9 1019 aaKnown RBP11.22□□□□□ -0.61
SMC6-204ENST00000428868 SMIM5Q71RC9 77 aa11.22□□□□□ -0.61
SMC6-204ENST00000428868 SMARCC1Q92922 1105 aaPredicted RBP11.22□□□□□ -0.61
SMC6-204ENST00000428868 CHMP4AQ9BY43 222 aa11.22□□□□□ -0.61
SMC6-204ENST00000428868 ZNF330Q9Y3S2 320 aaPredicted RBP11.22□□□□□ -0.61
SMC6-204ENST00000428868 STARD3NLO95772 234 aa11.21□□□□□ -0.61
SMC6-204ENST00000428868 CRKLP46109 303 aaKnown RBP11.21□□□□□ -0.61
SMC6-204ENST00000428868 FAM196AQ6ZSG2 479 aa11.21□□□□□ -0.61
SMC6-204ENST00000428868 RIC3Q7Z5B4 369 aa11.21□□□□□ -0.61
SMC6-204ENST00000428868 SIRT2Q8IXJ6 389 aa11.21□□□□□ -0.61
SMC6-204ENST00000428868 MYD88Q99836 296 aa11.21□□□□□ -0.61
SMC6-204ENST00000428868 TEX13AQ9BXU3 409 aaPredicted RBP11.21□□□□□ -0.61
SMC6-204ENST00000428868 SRCIN1Q9C0H9 1055 aa11.21□□□□□ -0.61
SMC6-204ENST00000428868 ZBTB3Q9H5J0 574 aa11.21□□□□□ -0.61
SMC6-204ENST00000428868 ANKRD13DQ6ZTN6 518 aa11.2□□□□□ -0.62
SMC6-204ENST00000428868 METTL22Q9BUU2 404 aaPredicted RBP11.2□□□□□ -0.62
SMC6-204ENST00000428868 BCL11BQ9C0K0 894 aaPredicted RBP11.2□□□□□ -0.62
SMC6-204ENST00000428868 USP44Q9H0E7 712 aa11.2□□□□□ -0.62
SMC6-204ENST00000428868 CCDC87Q9NVE4 849 aa11.2□□□□□ -0.62
SMC6-204ENST00000428868 TAF1P21675 1872 aa11.2□□□□□ -0.62
SMC6-204ENST00000428868 ATP5J2-PTCD1G3V325 749 aa11.19□□□□□ -0.62
SMC6-204ENST00000428868 DDX58O95786 925 aaKnown RBP11.19□□□□□ -0.62
SMC6-204ENST00000428868 AMIGO3Q86WK7 504 aa11.19□□□□□ -0.62
SMC6-204ENST00000428868 CCDC125Q86Z20 511 aa11.19□□□□□ -0.62
SMC6-204ENST00000428868 PLBD2Q8NHP8 589 aa11.19□□□□□ -0.62
SMC6-204ENST00000428868 LRRC4BQ9NT99 713 aa11.19□□□□□ -0.62
SMC6-204ENST00000428868 COL15A1P39059 1388 aa11.18□□□□□ -0.62
SMC6-204ENST00000428868 NEURL1BA8MQ27 555 aa11.18□□□□□ -0.62
SMC6-204ENST00000428868 NBPF7P0C2Y1 421 aaPredicted RBP11.18□□□□□ -0.62
SMC6-204ENST00000428868 EIF5P55010 431 aaKnown RBP11.18□□□□□ -0.62
SMC6-204ENST00000428868 AAMPQ13685 434 aa11.18□□□□□ -0.62
SMC6-204ENST00000428868 HLFQ16534 295 aa11.18□□□□□ -0.62
SMC6-204ENST00000428868 LINS1Q8NG48 757 aa11.18□□□□□ -0.62
SMC6-204ENST00000428868 JARID2Q92833 1246 aaPredicted RBP11.18□□□□□ -0.62
SMC6-204ENST00000428868 CCNL1Q9UK58 526 aaPredicted RBP11.18□□□□□ -0.62
SMC6-204ENST00000428868 LRRFIP2Q9Y608 721 aaKnown RBP11.18□□□□□ -0.62
SMC6-204ENST00000428868 QSER1Q2KHR3 1735 aa11.18□□□□□ -0.62
SMC6-204ENST00000428868 MAP3K15Q6ZN16 1313 aa11.17□□□□□ -0.62
SMC6-204ENST00000428868 CNTNAP4Q9C0A0 1308 aa11.17□□□□□ -0.62
SMC6-204ENST00000428868 ALDH1L1O75891 902 aa11.17□□□□□ -0.62
SMC6-204ENST00000428868 IL6STP40189 918 aaPredicted RBP11.17□□□□□ -0.62
SMC6-204ENST00000428868 CEP85Q6P2H3 762 aa11.17□□□□□ -0.62
SMC6-204ENST00000428868 CENPQQ7L2Z9 268 aaPredicted RBP11.17□□□□□ -0.62
SMC6-204ENST00000428868 TBC1D2BQ9UPU7 963 aa11.17□□□□□ -0.62
SMC6-204ENST00000428868 A0A1B0GUL6 1792 aa11.17□□□□□ -0.62
SMC6-204ENST00000428868 AK9Q5TCS8 1911 aa11.17□□□□□ -0.62
SMC6-204ENST00000428868 HDAC1Q13547 482 aaPredicted RBP11.16□□□□□ -0.62
SMC6-204ENST00000428868 DZIP3Q86Y13 1208 aaKnown RBP11.16□□□□□ -0.62
SMC6-204ENST00000428868 PROM2Q8N271 834 aa11.16□□□□□ -0.62
SMC6-204ENST00000428868 ANKRD44Q8N8A2 993 aa11.16□□□□□ -0.62
SMC6-204ENST00000428868 KAZALD1Q96I82 304 aa11.16□□□□□ -0.62
SMC6-204ENST00000428868 SUCLG2Q96I99 432 aa11.16□□□□□ -0.62
SMC6-204ENST00000428868 ARXQ96QS3 562 aa11.16□□□□□ -0.62
SMC6-204ENST00000428868 UTYO14607 1347 aa11.15□□□□□ -0.62
SMC6-204ENST00000428868 TNRC6CQ9HCJ0 1690 aaKnown RBP11.15□□□□□ -0.62
SMC6-204ENST00000428868 PNMA6EA0A0J9YXQ4 647 aa11.15□□□□□ -0.62
SMC6-204ENST00000428868 GRM8O00222 908 aa11.15□□□□□ -0.62
SMC6-204ENST00000428868 CAMTA2O94983 1202 aa11.15□□□□□ -0.62
SMC6-204ENST00000428868 GNAI2P04899 355 aa11.15□□□□□ -0.62
SMC6-204ENST00000428868 GNAI3P08754 354 aa11.15□□□□□ -0.62
SMC6-204ENST00000428868 UBTFL1P0CB47 393 aaPredicted RBP11.15□□□□□ -0.62
SMC6-204ENST00000428868 GCKRQ14397 625 aa11.15□□□□□ -0.62
SMC6-204ENST00000428868 KIF6Q6ZMV9 814 aa11.15□□□□□ -0.62
SMC6-204ENST00000428868 ISCA1Q9BUE6 129 aa11.15□□□□□ -0.62
SMC6-204ENST00000428868 COL4A1P02462 1669 aa11.14□□□□□ -0.63
SMC6-204ENST00000428868 GPTP24298 496 aa11.14□□□□□ -0.63
SMC6-204ENST00000428868 CASP7P55210 303 aa11.14□□□□□ -0.63
SMC6-204ENST00000428868 NEXNQ0ZGT2 675 aa11.14□□□□□ -0.63
SMC6-204ENST00000428868 EPHA10Q5JZY3 1008 aa11.14□□□□□ -0.63
SMC6-204ENST00000428868 CHMP4BQ9H444 224 aaKnown RBP11.14□□□□□ -0.63
SMC6-204ENST00000428868 RWDD1Q9H446 243 aaPredicted RBP11.14□□□□□ -0.63
SMC6-204ENST00000428868 PDZRN3Q9UPQ7 1066 aa11.14□□□□□ -0.63
SMC6-204ENST00000428868 IBTKQ9P2D0 1353 aaPredicted RBP11.14□□□□□ -0.63
SMC6-204ENST00000428868 UBN2Q6ZU65 1347 aa11.13□□□□□ -0.63
SMC6-204ENST00000428868 GNPATO15228 680 aa11.13□□□□□ -0.63
SMC6-204ENST00000428868 TCIRG1Q13488 830 aa11.13□□□□□ -0.63
SMC6-204ENST00000428868 RTL5Q5HYW3 569 aaPredicted RBP11.13□□□□□ -0.63
SMC6-204ENST00000428868 GIGYF2Q6Y7W6 1299 aaKnown RBP11.13□□□□□ -0.63
SMC6-204ENST00000428868 UBE3BQ7Z3V4 1068 aa11.13□□□□□ -0.63
SMC6-204ENST00000428868 SMC5Q8IY18 1101 aa11.13□□□□□ -0.63
SMC6-204ENST00000428868 C9orf78Q9NZ63 289 aaPredicted RBP11.13□□□□□ -0.63
SMC6-204ENST00000428868 CACNA1SQ13698 1873 aa11.12□□□□□ -0.63
SMC6-204ENST00000428868 ANKRD31Q8N7Z5 1873 aa11.12□□□□□ -0.63
SMC6-204ENST00000428868 APBA3O96018 575 aa11.12□□□□□ -0.63
SMC6-204ENST00000428868 TXNRD1Q16881 649 aa11.12□□□□□ -0.63
SMC6-204ENST00000428868 RC3H1Q5TC82 1133 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms