RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 TTLL7Q6ZT98 887 aa10.04□□□□□ -0.8
HMGA1P4-201ENST00000428643 RIC3Q7Z5B4 369 aa10.04□□□□□ -0.8
HMGA1P4-201ENST00000428643 DZIP3Q86Y13 1208 aaKnown RBP10.04□□□□□ -0.8
HMGA1P4-201ENST00000428643 ZBTB3Q9H5J0 574 aa10.04□□□□□ -0.8
HMGA1P4-201ENST00000428643 MAP3K2Q9Y2U5 619 aa10.04□□□□□ -0.8
HMGA1P4-201ENST00000428643 PI4KAP2A4QPH2 592 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 RPS6KA4O75676 772 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 RLBP1P12271 317 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 EIF5P55010 431 aaKnown RBP10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 NEXNQ0ZGT2 675 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 PDE3AQ14432 1141 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 ZNF827Q17R98 1081 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 KSR2Q6VAB6 950 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 ANKRD13DQ6ZTN6 518 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 ITPRIPQ8IWB1 547 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 PI4KAP1Q8N8J0 262 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 PLBD2Q8NHP8 589 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 DNAAF4Q8WXU2 420 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 TFCP2L1Q9NZI6 479 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 TBC1D2BQ9UPU7 963 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 PXDNLA1KZ92 1463 aa10.03□□□□□ -0.8
HMGA1P4-201ENST00000428643 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.02□□□□□ -0.81
HMGA1P4-201ENST00000428643 ADRA2BP18089 450 aa10.02□□□□□ -0.81
HMGA1P4-201ENST00000428643 SMIM5Q71RC9 77 aa10.02□□□□□ -0.81
HMGA1P4-201ENST00000428643 AMIGO3Q86WK7 504 aa10.02□□□□□ -0.81
HMGA1P4-201ENST00000428643 TMEM57Q8N5G2 664 aa10.02□□□□□ -0.81
HMGA1P4-201ENST00000428643 STK32BQ9NY57 414 aa10.02□□□□□ -0.81
HMGA1P4-201ENST00000428643 COG6Q9Y2V7 657 aa10.02□□□□□ -0.81
HMGA1P4-201ENST00000428643 MAP3K15Q6ZN16 1313 aa10.02□□□□□ -0.81
HMGA1P4-201ENST00000428643 SSFA2P28290 1259 aa10.01□□□□□ -0.81
HMGA1P4-201ENST00000428643 CCT4P50991 539 aaKnown RBP10.01□□□□□ -0.81
HMGA1P4-201ENST00000428643 CRBNQ96SW2 442 aa10.01□□□□□ -0.81
HMGA1P4-201ENST00000428643 MYD88Q99836 296 aa10.01□□□□□ -0.81
HMGA1P4-201ENST00000428643 ANO8Q9HCE9 1232 aaPredicted RBP10.01□□□□□ -0.81
HMGA1P4-201ENST00000428643 ATP10DQ9P241 1426 aa10□□□□□ -0.81
HMGA1P4-201ENST00000428643 ZPR1O75312 459 aa10□□□□□ -0.81
HMGA1P4-201ENST00000428643 CAMTA2O94983 1202 aa10□□□□□ -0.81
HMGA1P4-201ENST00000428643 RFC4P35249 363 aa10□□□□□ -0.81
HMGA1P4-201ENST00000428643 FKBP8Q14318 412 aa10□□□□□ -0.81
HMGA1P4-201ENST00000428643 MVPQ14764 893 aaKnown RBP10□□□□□ -0.81
HMGA1P4-201ENST00000428643 TRAPPC3LQ5T215 181 aa10□□□□□ -0.81
HMGA1P4-201ENST00000428643 AKT1S1Q96B36 256 aa10□□□□□ -0.81
HMGA1P4-201ENST00000428643 METTL22Q9BUU2 404 aaPredicted RBP10□□□□□ -0.81
HMGA1P4-201ENST00000428643 SRCIN1Q9C0H9 1055 aa10□□□□□ -0.81
HMGA1P4-201ENST00000428643 SRP68Q9UHB9 627 aaKnown RBP10□□□□□ -0.81
HMGA1P4-201ENST00000428643 ZNF652Q9Y2D9 606 aa10□□□□□ -0.81
HMGA1P4-201ENST00000428643 TAF1LQ8IZX4 1826 aa9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 ERVV-1B6SEH8 477 aa9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 ATP5J2-PTCD1G3V325 749 aa9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 GPTP24298 496 aa9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 HSP90AB3PQ58FF7 597 aa9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 BEND3Q5T5X7 828 aa9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 USPL1Q5W0Q7 1092 aa9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 INTS3Q68E01 1043 aaKnown RBP9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 FLAD1Q8NFF5 587 aa9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 LINS1Q8NG48 757 aa9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 ARHGEF1Q92888 912 aaKnown RBP9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 NARFQ9UHQ1 456 aa9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 DDX19BQ9UMR2 479 aa9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 USP42Q9H9J4 1324 aaKnown RBP9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 NUP188Q5SRE5 1749 aa9.99□□□□□ -0.81
HMGA1P4-201ENST00000428643 ALDH1L1O75891 902 aa9.98□□□□□ -0.81
HMGA1P4-201ENST00000428643 SLC15A2Q16348 729 aa9.98□□□□□ -0.81
HMGA1P4-201ENST00000428643 HLFQ16534 295 aa9.98□□□□□ -0.81
HMGA1P4-201ENST00000428643 CWF19L2Q2TBE0 894 aaKnown RBP9.98□□□□□ -0.81
HMGA1P4-201ENST00000428643 GIGYF2Q6Y7W6 1299 aaKnown RBP9.98□□□□□ -0.81
HMGA1P4-201ENST00000428643 EXOC6Q8TAG9 804 aa9.98□□□□□ -0.81
HMGA1P4-201ENST00000428643 SCN7AQ01118 1682 aa9.98□□□□□ -0.81
HMGA1P4-201ENST00000428643 NEURL1BA8MQ27 555 aa9.97□□□□□ -0.81
HMGA1P4-201ENST00000428643 IGKV5-2P06315 115 aa9.97□□□□□ -0.81
HMGA1P4-201ENST00000428643 TCIRG1Q13488 830 aa9.97□□□□□ -0.81
HMGA1P4-201ENST00000428643 CHMP4BQ9H444 224 aaKnown RBP9.97□□□□□ -0.81
HMGA1P4-201ENST00000428643 CWC25Q9NXE8 425 aaPredicted RBP9.97□□□□□ -0.81
HMGA1P4-201ENST00000428643 C9orf78Q9NZ63 289 aaPredicted RBP9.97□□□□□ -0.81
HMGA1P4-201ENST00000428643 PNPLA7Q6ZV29 1317 aa9.97□□□□□ -0.81
HMGA1P4-201ENST00000428643 MYH14Q7Z406 1995 aaKnown RBP9.97□□□□□ -0.81
HMGA1P4-201ENST00000428643 ARFGEF2Q9Y6D5 1785 aa9.96□□□□□ -0.81
HMGA1P4-201ENST00000428643 RGL2O15211 777 aa9.96□□□□□ -0.82
HMGA1P4-201ENST00000428643 GCKRQ14397 625 aa9.96□□□□□ -0.82
HMGA1P4-201ENST00000428643 CLEC4GQ6UXB4 293 aa9.96□□□□□ -0.82
HMGA1P4-201ENST00000428643 BICDL1Q6ZP65 573 aa9.96□□□□□ -0.82
HMGA1P4-201ENST00000428643 COL23A1Q86Y22 540 aaPredicted RBP9.96□□□□□ -0.82
HMGA1P4-201ENST00000428643 MEIS3Q99687 375 aa9.96□□□□□ -0.82
HMGA1P4-201ENST00000428643 ISCA1Q9BUE6 129 aa9.96□□□□□ -0.82
HMGA1P4-201ENST00000428643 NIP7Q9Y221 180 aaKnown RBP eCLIP9.96□□□□□ -0.82
HMGA1P4-201ENST00000428643 FAM177BA6PVY3 158 aa9.95□□□□□ -0.82
HMGA1P4-201ENST00000428643 GRM8O00222 908 aa9.95□□□□□ -0.82
HMGA1P4-201ENST00000428643 GNAI3P08754 354 aa9.95□□□□□ -0.82
HMGA1P4-201ENST00000428643 UBTFL1P0CB47 393 aaPredicted RBP9.95□□□□□ -0.82
HMGA1P4-201ENST00000428643 MSL1Q68DK7 614 aa9.95□□□□□ -0.82
HMGA1P4-201ENST00000428643 UBE3BQ7Z3V4 1068 aa9.95□□□□□ -0.82
HMGA1P4-201ENST00000428643 NLRP10Q86W26 655 aa9.95□□□□□ -0.82
HMGA1P4-201ENST00000428643 CCDC191Q8NCU4 936 aa9.95□□□□□ -0.82
HMGA1P4-201ENST00000428643 C1orf115Q9H7X2 142 aa9.95□□□□□ -0.82
HMGA1P4-201ENST00000428643 BCL2L12Q9HB09 334 aa9.95□□□□□ -0.82
HMGA1P4-201ENST00000428643 UBN2Q6ZU65 1347 aa9.95□□□□□ -0.82
HMGA1P4-201ENST00000428643 C4AP0C0L4 1744 aa9.95□□□□□ -0.82
HMGA1P4-201ENST00000428643 BCORQ6W2J9 1755 aa9.95□□□□□ -0.82
HMGA1P4-201ENST00000428643 UBR3Q6ZT12 1888 aa9.95□□□□□ -0.82
HMGA1P4-201ENST00000428643 NPHP1O15259 732 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms