RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 CCDC30Q5VVM6 783 aa8.9□□□□□ -0.98
LINC01108-201ENST00000427276 FAM200AQ8TCP9 573 aa8.9□□□□□ -0.98
LINC01108-201ENST00000427276 ZBTB9Q96C00 473 aa8.9□□□□□ -0.98
LINC01108-201ENST00000427276 DDX11Q96FC9 970 aa8.9□□□□□ -0.98
LINC01108-201ENST00000427276 PHAXQ9H814 394 aaKnown RBP8.9□□□□□ -0.98
LINC01108-201ENST00000427276 PPLO60437 1756 aa8.9□□□□□ -0.98
LINC01108-201ENST00000427276 RPAP1Q9BWH6 1393 aaPredicted RBP8.9□□□□□ -0.99
LINC01108-201ENST00000427276 WASLO00401 505 aaPredicted RBP8.89□□□□□ -0.99
LINC01108-201ENST00000427276 GORABQ5T7V8 394 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 TTC6Q86TZ1 520 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 RHPN1Q8TCX5 695 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 ARHGEF40Q8TER5 1519 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 RAB11FIP3O75154 756 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 TPM3P06753 285 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 ZNF165P49910 485 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 PTH1RQ03431 593 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 HDGFL1Q5TGJ6 251 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 CDC37L1Q7L3B6 337 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 CBX8Q9HC52 389 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 MTMR6Q9Y217 621 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 CCDC61Q9Y6R9 512 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 NEO1Q92859 1461 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 SGSM2O43147 1006 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 SPTLC3Q9NUV7 552 aa8.89□□□□□ -0.99
LINC01108-201ENST00000427276 KIDINS220Q9ULH0 1771 aa8.88□□□□□ -0.99
LINC01108-201ENST00000427276 ARHGEF28Q8N1W1 1705 aaKnown RBP8.88□□□□□ -0.99
LINC01108-201ENST00000427276 H3BQV1 296 aa8.88□□□□□ -0.99
LINC01108-201ENST00000427276 IFIT2P09913 472 aaKnown RBP8.88□□□□□ -0.99
LINC01108-201ENST00000427276 NCBP1Q09161 790 aaKnown RBP8.88□□□□□ -0.99
LINC01108-201ENST00000427276 ARID5BQ14865 1188 aa8.88□□□□□ -0.99
LINC01108-201ENST00000427276 IFFO2Q5TF58 517 aa8.88□□□□□ -0.99
LINC01108-201ENST00000427276 ERCC4Q92889 916 aaPredicted RBP8.88□□□□□ -0.99
LINC01108-201ENST00000427276 POGZQ7Z3K3 1410 aa8.88□□□□□ -0.99
LINC01108-201ENST00000427276 ABCC3O15438 1527 aa8.88□□□□□ -0.99
LINC01108-201ENST00000427276 CD163L1Q9NR16 1453 aa8.88□□□□□ -0.99
LINC01108-201ENST00000427276 USP32Q8NFA0 1604 aa8.88□□□□□ -0.99
LINC01108-201ENST00000427276 KIF20AO95235 890 aa8.88□□□□□ -0.99
LINC01108-201ENST00000427276 ME3Q16798 604 aa8.88□□□□□ -0.99
LINC01108-201ENST00000427276 FMNL2Q96PY5 1086 aa8.88□□□□□ -0.99
LINC01108-201ENST00000427276 KNDC1Q76NI1 1749 aa8.88□□□□□ -0.99
LINC01108-201ENST00000427276 RAD50Q92878 1312 aa8.88□□□□□ -0.99
LINC01108-201ENST00000427276 GTF2F1P35269 517 aaKnown RBP eCLIP8.87□□□□□ -0.99
LINC01108-201ENST00000427276 CEP135Q66GS9 1140 aa8.87□□□□□ -0.99
LINC01108-201ENST00000427276 RUFY2Q8WXA3 655 aa8.87□□□□□ -0.99
LINC01108-201ENST00000427276 SIL1Q9H173 461 aa8.87□□□□□ -0.99
LINC01108-201ENST00000427276 PA2G4Q9UQ80 394 aaKnown RBP8.87□□□□□ -0.99
LINC01108-201ENST00000427276 MRVI1Q9Y6F6 885 aa8.87□□□□□ -0.99
LINC01108-201ENST00000427276 TAF7Q15545 349 aaPredicted RBP8.87□□□□□ -0.99
LINC01108-201ENST00000427276 CLASRPQ8N2M8 674 aaKnown RBP8.87□□□□□ -0.99
LINC01108-201ENST00000427276 USHBP1Q8N6Y0 703 aa8.87□□□□□ -0.99
LINC01108-201ENST00000427276 USP44Q9H0E7 712 aa8.87□□□□□ -0.99
LINC01108-201ENST00000427276 KIF24Q5T7B8 1368 aa8.87□□□□□ -0.99
LINC01108-201ENST00000427276 NBPF7P0C2Y1 421 aaPredicted RBP8.87□□□□□ -0.99
LINC01108-201ENST00000427276 CACTINQ8WUQ7 758 aaKnown RBP8.87□□□□□ -0.99
LINC01108-201ENST00000427276 CCDC8Q9H0W5 538 aaPredicted RBP8.87□□□□□ -0.99
LINC01108-201ENST00000427276 MAP2P11137 1827 aaKnown RBP8.87□□□□□ -0.99
LINC01108-201ENST00000427276 PTPN14Q15678 1187 aa8.86□□□□□ -0.99
LINC01108-201ENST00000427276 ZRSR1Q15695 479 aaKnown RBP8.86□□□□□ -0.99
LINC01108-201ENST00000427276 ZSCAN25Q6NSZ9 544 aa8.86□□□□□ -0.99
LINC01108-201ENST00000427276 KIF1BPQ96EK5 621 aa8.86□□□□□ -0.99
LINC01108-201ENST00000427276 LRRC2Q9BYS8 371 aa8.86□□□□□ -0.99
LINC01108-201ENST00000427276 LSG1Q9H089 658 aaKnown RBP8.86□□□□□ -0.99
LINC01108-201ENST00000427276 HYPKQ9NX55 129 aa8.86□□□□□ -0.99
LINC01108-201ENST00000427276 C9orf78Q9NZ63 289 aaPredicted RBP8.86□□□□□ -0.99
LINC01108-201ENST00000427276 OGFRQ9NZT2 677 aa8.86□□□□□ -0.99
LINC01108-201ENST00000427276 USP16Q9Y5T5 823 aa8.86□□□□□ -0.99
LINC01108-201ENST00000427276 LARP1Q6PKG0 1096 aaKnown RBP8.86□□□□□ -0.99
LINC01108-201ENST00000427276 AACSQ86V21 672 aa8.86□□□□□ -0.99
LINC01108-201ENST00000427276 BOLA2Q9H3K6 86 aa8.86□□□□□ -0.99
LINC01108-201ENST00000427276 ADAMTSL3P82987 1691 aa8.86□□□□□ -0.99
LINC01108-201ENST00000427276 SOS1Q07889 1333 aaPredicted RBP8.86□□□□□ -0.99
LINC01108-201ENST00000427276 MAP3K19Q56UN5 1328 aa8.86□□□□□ -0.99
LINC01108-201ENST00000427276 SMTNL1A8MU46 457 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 NR1I2O75469 434 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 GUCY1B3Q02153 619 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 BLOC1S2Q6QNY1 142 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 FAM227BQ96M60 508 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 FSD1Q9BTV5 496 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 ZNF215Q9UL58 517 aaPredicted RBP8.85□□□□□ -0.99
LINC01108-201ENST00000427276 TPCN1Q9ULQ1 816 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 RBM8AQ9Y5S9 174 aaKnown RBP8.85□□□□□ -0.99
LINC01108-201ENST00000427276 ARHGAP31Q2M1Z3 1444 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 SKILP12757 684 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 ZNF75DP51815 510 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 ELF2Q15723 593 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 NGDNQ8NEJ9 315 aaKnown RBP8.85□□□□□ -0.99
LINC01108-201ENST00000427276 ESF1Q9H501 851 aaKnown RBP8.85□□□□□ -0.99
LINC01108-201ENST00000427276 ST7Q9NRC1 585 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 FRMPD1Q5SYB0 1578 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 NEURL4Q96JN8 1562 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 PTPRMP28827 1452 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 PI4KAP2A4QPH2 592 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 USP27XA6NNY8 438 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 AIMP1Q12904 312 aaKnown RBP8.85□□□□□ -0.99
LINC01108-201ENST00000427276 COL9A3Q14050 684 aaPredicted RBP8.85□□□□□ -0.99
LINC01108-201ENST00000427276 CCDC144BQ3MJ40 725 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 CCDC144CPQ8IYA2 1237 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 PI4KAP1Q8N8J0 262 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 TMEM87AQ8NBN3 555 aa8.85□□□□□ -0.99
LINC01108-201ENST00000427276 TTC14Q96N46 770 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms