RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 JAKMIP2Q96AA8 810 aa16.58■□□□□ 0.25
PTPN13-203ENST00000427191 TTF1Q15361 905 aaPredicted RBP16.58■□□□□ 0.24
PTPN13-203ENST00000427191 PRKCSHP14314 528 aaPredicted RBP16.58■□□□□ 0.24
PTPN13-203ENST00000427191 USP5P45974 858 aa16.58■□□□□ 0.24
PTPN13-203ENST00000427191 MTIF2P46199 727 aaKnown RBP16.58■□□□□ 0.24
PTPN13-203ENST00000427191 CCDC6Q16204 474 aa16.58■□□□□ 0.24
PTPN13-203ENST00000427191 DRC1Q96MC2 740 aa16.58■□□□□ 0.24
PTPN13-203ENST00000427191 MACROD2A1Z1Q3 448 aa16.57■□□□□ 0.24
PTPN13-203ENST00000427191 UBE2HP62256 183 aa16.57■□□□□ 0.24
PTPN13-203ENST00000427191 CAMK4Q16566 473 aa16.57■□□□□ 0.24
PTPN13-203ENST00000427191 SPAG1Q07617 926 aa16.57■□□□□ 0.24
PTPN13-203ENST00000427191 MKNK2Q9HBH9 465 aa16.57■□□□□ 0.24
PTPN13-203ENST00000427191 IFIT1P09914 478 aaKnown RBP16.57■□□□□ 0.24
PTPN13-203ENST00000427191 KLHL10Q6JEL2 608 aa16.57■□□□□ 0.24
PTPN13-203ENST00000427191 JADE2Q9NQC1 790 aa16.57■□□□□ 0.24
PTPN13-203ENST00000427191 PROSER2Q86WR7 435 aaPredicted RBP16.57■□□□□ 0.24
PTPN13-203ENST00000427191 MKRN1Q9UHC7 482 aaKnown RBP16.57■□□□□ 0.24
PTPN13-203ENST00000427191 NAP1L3Q99457 506 aaPredicted RBP16.56■□□□□ 0.24
PTPN13-203ENST00000427191 A6NNZ2 444 aa16.56■□□□□ 0.24
PTPN13-203ENST00000427191 CBX1P83916 185 aa16.56■□□□□ 0.24
PTPN13-203ENST00000427191 TUBB8Q3ZCM7 444 aa16.56■□□□□ 0.24
PTPN13-203ENST00000427191 CEP135Q66GS9 1140 aa16.56■□□□□ 0.24
PTPN13-203ENST00000427191 MAP4K4O95819 1239 aaPredicted RBP16.56■□□□□ 0.24
PTPN13-203ENST00000427191 LMAN1P49257 510 aa16.56■□□□□ 0.24
PTPN13-203ENST00000427191 LMBR1Q8WVP7 490 aa16.56■□□□□ 0.24
PTPN13-203ENST00000427191 CYLC1P35663 651 aaPredicted RBP16.56■□□□□ 0.24
PTPN13-203ENST00000427191 DZIP1Q86YF9 867 aaKnown RBP16.56■□□□□ 0.24
PTPN13-203ENST00000427191 TMCO5BA8MYB1 307 aa16.55■□□□□ 0.24
PTPN13-203ENST00000427191 ERMNQ8TAM6 284 aa16.55■□□□□ 0.24
PTPN13-203ENST00000427191 C16orf45Q96MC5 204 aaPredicted RBP16.55■□□□□ 0.24
PTPN13-203ENST00000427191 IDH1O75874 414 aaKnown RBP16.55■□□□□ 0.24
PTPN13-203ENST00000427191 ALDH3A1P30838 453 aa16.55■□□□□ 0.24
PTPN13-203ENST00000427191 SLU7O95391 586 aaKnown RBP16.55■□□□□ 0.24
PTPN13-203ENST00000427191 CCDC14Q49A88 953 aa16.55■□□□□ 0.24
PTPN13-203ENST00000427191 SWAP70Q9UH65 585 aa16.55■□□□□ 0.24
PTPN13-203ENST00000427191 RTEL1-TNFRSF6BF6WH68 1400 aa16.54■□□□□ 0.24
PTPN13-203ENST00000427191 SULT6B1Q6IMI4 303 aa16.54■□□□□ 0.24
PTPN13-203ENST00000427191 GTF2F1P35269 517 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTPN13-203ENST00000427191 CCDC40Q4G0X9 1142 aa16.54■□□□□ 0.24
PTPN13-203ENST00000427191 ESCO1Q5FWF5 840 aa16.54■□□□□ 0.24
PTPN13-203ENST00000427191 USH1CQ9Y6N9 552 aa16.54■□□□□ 0.24
PTPN13-203ENST00000427191 GTF2A1P52655 376 aaPredicted RBP16.54■□□□□ 0.24
PTPN13-203ENST00000427191 CCDC174Q6PII3 467 aa16.54■□□□□ 0.24
PTPN13-203ENST00000427191 SLC52A1Q9NWF4 448 aa16.54■□□□□ 0.24
PTPN13-203ENST00000427191 CRACR2BQ8N4Y2 399 aaPredicted RBP16.54■□□□□ 0.24
PTPN13-203ENST00000427191 GNAT3A8MTJ3 354 aa16.54■□□□□ 0.24
PTPN13-203ENST00000427191 USP25Q9UHP3 1055 aa16.54■□□□□ 0.24
PTPN13-203ENST00000427191 PTPRCP08575 1304 aa16.53■□□□□ 0.24
PTPN13-203ENST00000427191 POLR3DP05423 398 aaPredicted RBP16.53■□□□□ 0.24
PTPN13-203ENST00000427191 GPATCH11Q8N954 259 aa16.53■□□□□ 0.24
PTPN13-203ENST00000427191 STIM2Q9P246 746 aa16.53■□□□□ 0.24
PTPN13-203ENST00000427191 CEP83Q9Y592 693 aa16.53■□□□□ 0.24
PTPN13-203ENST00000427191 C9orf84Q5VXU9 1444 aa16.53■□□□□ 0.24
PTPN13-203ENST00000427191 METTL24Q5JXM2 366 aa16.53■□□□□ 0.24
PTPN13-203ENST00000427191 ATP2A2P16615 1042 aaKnown RBP16.53■□□□□ 0.24
PTPN13-203ENST00000427191 NUTM2GQ5VZR2 741 aa16.53■□□□□ 0.24
PTPN13-203ENST00000427191 UBA5Q9GZZ9 404 aa16.53■□□□□ 0.24
PTPN13-203ENST00000427191 SLC5A1P13866 664 aa16.53■□□□□ 0.24
PTPN13-203ENST00000427191 SETSIPP0DME0 302 aa16.52■□□□□ 0.24
PTPN13-203ENST00000427191 MAP7D1Q3KQU3 841 aa16.52■□□□□ 0.24
PTPN13-203ENST00000427191 NFE2L2Q16236 605 aa16.52■□□□□ 0.24
PTPN13-203ENST00000427191 ZNF213O14771 459 aa16.52■□□□□ 0.24
PTPN13-203ENST00000427191 NOP2P46087 812 aaKnown RBP16.52■□□□□ 0.24
PTPN13-203ENST00000427191 MAP3K9P80192 1104 aa16.52■□□□□ 0.24
PTPN13-203ENST00000427191 TMC6Q7Z403 805 aa16.52■□□□□ 0.24
PTPN13-203ENST00000427191 ARFGAP2Q8N6H7 521 aa16.52■□□□□ 0.24
PTPN13-203ENST00000427191 KCNH5Q8NCM2 988 aa16.52■□□□□ 0.24
PTPN13-203ENST00000427191 CTAGE9A4FU28 777 aa16.52■□□□□ 0.23
PTPN13-203ENST00000427191 CCDC102BQ68D86 513 aa16.52■□□□□ 0.23
PTPN13-203ENST00000427191 ZNF444Q8N0Y2 327 aaPredicted RBP16.51■□□□□ 0.23
PTPN13-203ENST00000427191 FSIP1Q8NA03 581 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 EVI5LQ96CN4 794 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 EXOC1Q9NV70 894 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 FGD5Q6ZNL6 1462 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 GOLGA8BA8MQT2 603 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 MXRA7P84157 204 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 TOM1L2Q6ZVM7 507 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 CTAGE15A4D2H0 777 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 CTAGE8P0CG41 777 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 CCDC129Q6ZRS4 1044 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 CCDC121Q6ZUS5 278 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 CTAGE6Q86UF2 777 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 CTAGE4Q8IX94 777 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 THEMISQ8N1K5 641 aaPredicted RBP16.51■□□□□ 0.23
PTPN13-203ENST00000427191 MYL6BP14649 208 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 PDE4BQ07343 736 aa16.51■□□□□ 0.23
PTPN13-203ENST00000427191 TSR2Q969E8 191 aaKnown RBP16.51■□□□□ 0.23
PTPN13-203ENST00000427191 FAM135AQ9P2D6 1515 aa16.5■□□□□ 0.23
PTPN13-203ENST00000427191 ADCY5O95622 1261 aa16.5■□□□□ 0.23
PTPN13-203ENST00000427191 ZFYP08048 801 aaPredicted RBP16.5■□□□□ 0.23
PTPN13-203ENST00000427191 ATP5DP30049 168 aa16.5■□□□□ 0.23
PTPN13-203ENST00000427191 PRPF4BQ13523 1007 aaKnown RBP16.5■□□□□ 0.23
PTPN13-203ENST00000427191 TMEM87AQ8NBN3 555 aa16.5■□□□□ 0.23
PTPN13-203ENST00000427191 RSRC1Q96IZ7 334 aaKnown RBP16.5■□□□□ 0.23
PTPN13-203ENST00000427191 ATAD2BQ9ULI0 1458 aa16.5■□□□□ 0.23
PTPN13-203ENST00000427191 FAM177BA6PVY3 158 aa16.5■□□□□ 0.23
PTPN13-203ENST00000427191 AMOTQ4VCS5 1084 aa16.5■□□□□ 0.23
PTPN13-203ENST00000427191 KIF3CO14782 793 aa16.5■□□□□ 0.23
PTPN13-203ENST00000427191 TSGA10Q9BZW7 698 aa16.5■□□□□ 0.23
PTPN13-203ENST00000427191 DHX37Q8IY37 1157 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms