RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 DICER1Q9UPY3 1922 aaKnown RBP13.61□□□□□ -0.23
HDLBP-213ENST00000427007 GLTPD2A6NH11 291 aa13.61□□□□□ -0.23
HDLBP-213ENST00000427007 SNRPA1P09661 255 aaKnown RBP13.61□□□□□ -0.23
HDLBP-213ENST00000427007 ST5P78524 1137 aa13.61□□□□□ -0.23
HDLBP-213ENST00000427007 PDZRN3Q9UPQ7 1066 aa13.61□□□□□ -0.23
HDLBP-213ENST00000427007 SLX4Q8IY92 1834 aa13.61□□□□□ -0.23
HDLBP-213ENST00000427007 KDM3BQ7LBC6 1761 aa13.59□□□□□ -0.23
HDLBP-213ENST00000427007 SMC1BQ8NDV3 1235 aa13.59□□□□□ -0.23
HDLBP-213ENST00000427007 MIS18AQ9NYP9 233 aa13.59□□□□□ -0.23
HDLBP-213ENST00000427007 FAM177BA6PVY3 158 aa13.58□□□□□ -0.24
HDLBP-213ENST00000427007 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
HDLBP-213ENST00000427007 HTATSF1O43719 755 aaKnown RBP13.58□□□□□ -0.24
HDLBP-213ENST00000427007 SRGNP10124 158 aa13.58□□□□□ -0.24
HDLBP-213ENST00000427007 VEGFAP15692 232 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-213ENST00000427007 ERFEQ4G0M1 354 aa13.58□□□□□ -0.24
HDLBP-213ENST00000427007 PRPF40BQ6NWY9 871 aaKnown RBP13.58□□□□□ -0.24
HDLBP-213ENST00000427007 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
HDLBP-213ENST00000427007 NBPF5PQ86XG9 351 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-213ENST00000427007 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
HDLBP-213ENST00000427007 ZNF652Q9Y2D9 606 aa13.58□□□□□ -0.24
HDLBP-213ENST00000427007 TAF7Q15545 349 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-213ENST00000427007 STYK1Q6J9G0 422 aa13.57□□□□□ -0.24
HDLBP-213ENST00000427007 CLEC4GQ6UXB4 293 aa13.57□□□□□ -0.24
HDLBP-213ENST00000427007 CNKSR1Q969H4 720 aa13.57□□□□□ -0.24
HDLBP-213ENST00000427007 KLRG1Q96E93 195 aa13.57□□□□□ -0.24
HDLBP-213ENST00000427007 MASTLQ96GX5 879 aa13.57□□□□□ -0.24
HDLBP-213ENST00000427007 TAOK3Q9H2K8 898 aa13.57□□□□□ -0.24
HDLBP-213ENST00000427007 NIP7Q9Y221 180 aaKnown RBP eCLIP13.57□□□□□ -0.24
HDLBP-213ENST00000427007 POTECB2RU33 542 aa13.56□□□□□ -0.24
HDLBP-213ENST00000427007 NEFMP07197 916 aa13.56□□□□□ -0.24
HDLBP-213ENST00000427007 DPY19L2Q6NUT2 758 aa13.56□□□□□ -0.24
HDLBP-213ENST00000427007 HLFQ16534 295 aa13.55□□□□□ -0.24
HDLBP-213ENST00000427007 NGEFQ8N5V2 710 aa13.55□□□□□ -0.24
HDLBP-213ENST00000427007 LTBP3Q9NS15 1303 aa13.55□□□□□ -0.24
HDLBP-213ENST00000427007 TPTE2Q6XPS3 522 aa13.54□□□□□ -0.24
HDLBP-213ENST00000427007 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
HDLBP-213ENST00000427007 PLEKHF1Q96S99 279 aa13.54□□□□□ -0.24
HDLBP-213ENST00000427007 THUMPD2Q9BTF0 503 aaKnown RBP13.54□□□□□ -0.24
HDLBP-213ENST00000427007 NUP98P52948 1817 aa13.54□□□□□ -0.24
HDLBP-213ENST00000427007 DDNO94850 711 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-213ENST00000427007 NPR1P16066 1061 aa13.53□□□□□ -0.24
HDLBP-213ENST00000427007 SOGA3Q5TF21 947 aa13.53□□□□□ -0.24
HDLBP-213ENST00000427007 GTF2E1P29083 439 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-213ENST00000427007 NFE2L2Q16236 605 aa13.52□□□□□ -0.25
HDLBP-213ENST00000427007 CCDC93Q567U6 631 aa13.52□□□□□ -0.25
HDLBP-213ENST00000427007 OLFM4Q6UX06 510 aa13.52□□□□□ -0.25
HDLBP-213ENST00000427007 JMYQ8N9B5 988 aa13.52□□□□□ -0.25
HDLBP-213ENST00000427007 PNISRQ8TF01 805 aaKnown RBP13.52□□□□□ -0.25
HDLBP-213ENST00000427007 RRP7AQ9Y3A4 280 aaKnown RBP13.52□□□□□ -0.25
HDLBP-213ENST00000427007 MAPK8IP3Q9UPT6 1336 aa13.51□□□□□ -0.25
HDLBP-213ENST00000427007 MYL6BP14649 208 aa13.51□□□□□ -0.25
HDLBP-213ENST00000427007 EIF4A1P60842 406 aaKnown RBP13.51□□□□□ -0.25
HDLBP-213ENST00000427007 C7orf43Q8WVR3 580 aa13.51□□□□□ -0.25
HDLBP-213ENST00000427007 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
HDLBP-213ENST00000427007 KLRG2A4D1S0 409 aaPredicted RBP13.5□□□□□ -0.25
HDLBP-213ENST00000427007 RGL2O15211 777 aa13.5□□□□□ -0.25
HDLBP-213ENST00000427007 POTEIP0CG38 1075 aa13.5□□□□□ -0.25
HDLBP-213ENST00000427007 POTEJP0CG39 1038 aa13.5□□□□□ -0.25
HDLBP-213ENST00000427007 TTLL7Q6ZT98 887 aa13.5□□□□□ -0.25
HDLBP-213ENST00000427007 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
HDLBP-213ENST00000427007 MAP3K15Q6ZN16 1313 aa13.49□□□□□ -0.25
HDLBP-213ENST00000427007 FKBP4Q02790 459 aaKnown RBP eCLIP13.49□□□□□ -0.251e-6■■□□□ 12.8
HDLBP-213ENST00000427007 KIF6Q6ZMV9 814 aa13.49□□□□□ -0.25
HDLBP-213ENST00000427007 ZBTB3Q9H5J0 574 aa13.49□□□□□ -0.25
HDLBP-213ENST00000427007 ZNF277Q9NRM2 450 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-213ENST00000427007 SCN4AP35499 1836 aa13.48□□□□□ -0.25
HDLBP-213ENST00000427007 GPTP24298 496 aa13.48□□□□□ -0.25
HDLBP-213ENST00000427007 NYXQ9GZU5 481 aa13.48□□□□□ -0.25
HDLBP-213ENST00000427007 PNNQ9H307 717 aaKnown RBP13.48□□□□□ -0.25
HDLBP-213ENST00000427007 UBN2Q6ZU65 1347 aa13.47□□□□□ -0.25
HDLBP-213ENST00000427007 ZNF541Q9H0D2 1346 aa13.47□□□□□ -0.25
HDLBP-213ENST00000427007 ERVV-1B6SEH8 477 aa13.47□□□□□ -0.25
HDLBP-213ENST00000427007 ALDH1B1P30837 517 aa13.47□□□□□ -0.25
HDLBP-213ENST00000427007 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
HDLBP-213ENST00000427007 TSPYL4Q9UJ04 414 aa13.47□□□□□ -0.25
HDLBP-213ENST00000427007 COL13A1Q5TAT6 717 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-213ENST00000427007 SUSD4Q5VX71 490 aa13.46□□□□□ -0.25
HDLBP-213ENST00000427007 RTKN2Q8IZC4 609 aa13.46□□□□□ -0.25
HDLBP-213ENST00000427007 SYNE4Q8N205 404 aa13.46□□□□□ -0.25
HDLBP-213ENST00000427007 IQCA1LA6NCM1 817 aa13.45□□□□□ -0.26
HDLBP-213ENST00000427007 EIF2S2P20042 333 aaKnown RBP13.45□□□□□ -0.26
HDLBP-213ENST00000427007 IARSP41252 1262 aaKnown RBP13.45□□□□□ -0.26
HDLBP-213ENST00000427007 RIPK4P57078 832 aa13.45□□□□□ -0.26
HDLBP-213ENST00000427007 CRY2Q49AN0 593 aa13.45□□□□□ -0.26
HDLBP-213ENST00000427007 RPGRQ92834 1020 aaKnown RBP13.45□□□□□ -0.26
HDLBP-213ENST00000427007 TAF1DQ9H5J8 278 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-213ENST00000427007 SNED1Q8TER0 1413 aa13.45□□□□□ -0.26
HDLBP-213ENST00000427007 ANXA1P04083 346 aa13.44□□□□□ -0.26
HDLBP-213ENST00000427007 HSPA1AP0DMV8 641 aaKnown RBP13.44□□□□□ -0.26
HDLBP-213ENST00000427007 HSPA1BP0DMV9 641 aaKnown RBP13.44□□□□□ -0.26
HDLBP-213ENST00000427007 EAPPQ56P03 285 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-213ENST00000427007 SLC51AQ86UW1 340 aa13.44□□□□□ -0.26
HDLBP-213ENST00000427007 ZNF34Q8IZ26 560 aa13.44□□□□□ -0.26
HDLBP-213ENST00000427007 L3MBTL3Q96JM7 780 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-213ENST00000427007 MKRN1Q9UHC7 482 aaKnown RBP13.44□□□□□ -0.26
HDLBP-213ENST00000427007 IBTKQ9P2D0 1353 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-213ENST00000427007 COL4A5P29400 1685 aa13.44□□□□□ -0.26
HDLBP-213ENST00000427007 ERBB4Q15303 1308 aa13.43□□□□□ -0.26
HDLBP-213ENST00000427007 RNF123Q5XPI4 1314 aa13.43□□□□□ -0.26
HDLBP-213ENST00000427007 ANKRD36CQ5JPF3 1778 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms