RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 SOGA3Q5TF21 947 aa17.16■□□□□ 0.34
NELFE-203ENST00000426722 STYK1Q6J9G0 422 aa17.16■□□□□ 0.34
NELFE-203ENST00000426722 LTBP3Q9NS15 1303 aa17.16■□□□□ 0.34
NELFE-203ENST00000426722 CEP350Q5VT06 3117 aa17.16■□□□□ 0.34
NELFE-203ENST00000426722 COL11A2P13942 1736 aaPredicted RBP17.16■□□□□ 0.34
NELFE-203ENST00000426722 C21orf2O43822 256 aa17.15■□□□□ 0.34
NELFE-203ENST00000426722 NEFMP07197 916 aa17.15■□□□□ 0.34
NELFE-203ENST00000426722 KLRG1Q96E93 195 aa17.15■□□□□ 0.34
NELFE-203ENST00000426722 MASTLQ96GX5 879 aa17.15■□□□□ 0.34
NELFE-203ENST00000426722 TAF7Q15545 349 aaPredicted RBP17.14■□□□□ 0.33
NELFE-203ENST00000426722 MCM10Q7L590 875 aa17.14■□□□□ 0.33
NELFE-203ENST00000426722 CACNA1SQ13698 1873 aa17.14■□□□□ 0.33
NELFE-203ENST00000426722 SLX4Q8IY92 1834 aa17.13■□□□□ 0.33
NELFE-203ENST00000426722 SRGNP10124 158 aa17.13■□□□□ 0.33
NELFE-203ENST00000426722 PNISRQ8TF01 805 aaKnown RBP17.13■□□□□ 0.33
NELFE-203ENST00000426722 ERFEQ4G0M1 354 aa17.12■□□□□ 0.33
NELFE-203ENST00000426722 TPTE2Q6XPS3 522 aa17.12■□□□□ 0.33
NELFE-203ENST00000426722 NBPF5PQ86XG9 351 aaPredicted RBP17.12■□□□□ 0.33
NELFE-203ENST00000426722 CCDC24Q8N4L8 307 aa17.12■□□□□ 0.33
NELFE-203ENST00000426722 JMYQ8N9B5 988 aa17.12■□□□□ 0.33
NELFE-203ENST00000426722 TAOK3Q9H2K8 898 aa17.12■□□□□ 0.33
NELFE-203ENST00000426722 DLG5Q8TDM6 1919 aa17.11■□□□□ 0.33
NELFE-203ENST00000426722 PRAMEF22A3QJZ6 481 aa17.11■□□□□ 0.33
NELFE-203ENST00000426722 LAMB4A4D0S4 1761 aa17.1■□□□□ 0.33
NELFE-203ENST00000426722 DCTN1Q14203 1278 aa17.1■□□□□ 0.33
NELFE-203ENST00000426722 PRPF40BQ6NWY9 871 aaKnown RBP17.1■□□□□ 0.33
NELFE-203ENST00000426722 PNNQ9H307 717 aaKnown RBP17.1■□□□□ 0.33
NELFE-203ENST00000426722 ZNF219Q9P2Y4 722 aaPredicted RBP17.1■□□□□ 0.33
NELFE-203ENST00000426722 KLRG2A4D1S0 409 aaPredicted RBP17.09■□□□□ 0.33
NELFE-203ENST00000426722 POTECB2RU33 542 aa17.09■□□□□ 0.33
NELFE-203ENST00000426722 NBPF26B4DH59 902 aa17.09■□□□□ 0.33
NELFE-203ENST00000426722 NPR1P16066 1061 aa17.09■□□□□ 0.33
NELFE-203ENST00000426722 PIP4K2AP48426 406 aaPredicted RBP17.09■□□□□ 0.33
NELFE-203ENST00000426722 NBPF10Q6P3W6 841 aaKnown RBP17.09■□□□□ 0.33
NELFE-203ENST00000426722 NBPF15Q8N660 670 aa17.09■□□□□ 0.33
NELFE-203ENST00000426722 NIP7Q9Y221 180 aaKnown RBP eCLIP17.09■□□□□ 0.33
NELFE-203ENST00000426722 KDM3BQ7LBC6 1761 aa17.07■□□□□ 0.32
NELFE-203ENST00000426722 HTRA3P83110 453 aa17.07■□□□□ 0.32
NELFE-203ENST00000426722 CCDC93Q567U6 631 aa17.07■□□□□ 0.32
NELFE-203ENST00000426722 ERVV-1B6SEH8 477 aa17.06■□□□□ 0.32
NELFE-203ENST00000426722 ALDH1B1P30837 517 aa17.06■□□□□ 0.32
NELFE-203ENST00000426722 C7orf43Q8WVR3 580 aa17.06■□□□□ 0.32
NELFE-203ENST00000426722 NUP98P52948 1817 aa17.05■□□□□ 0.32
NELFE-203ENST00000426722 PLEKHF1Q96S99 279 aa17.05■□□□□ 0.32
NELFE-203ENST00000426722 NYXQ9GZU5 481 aa17.05■□□□□ 0.32
NELFE-203ENST00000426722 SCN4AP35499 1836 aa17.05■□□□□ 0.32
NELFE-203ENST00000426722 GTF2E1P29083 439 aaPredicted RBP17.04■□□□□ 0.32
NELFE-203ENST00000426722 FKBP4Q02790 459 aaKnown RBP eCLIP17.04■□□□□ 0.32
NELFE-203ENST00000426722 NFE2L2Q16236 605 aa17.04■□□□□ 0.32
NELFE-203ENST00000426722 RTKN2Q8IZC4 609 aa17.04■□□□□ 0.32
NELFE-203ENST00000426722 MIS18AQ9NYP9 233 aa17.04■□□□□ 0.32
NELFE-203ENST00000426722 IQCA1LA6NCM1 817 aa17.03■□□□□ 0.32
NELFE-203ENST00000426722 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
NELFE-203ENST00000426722 HLFQ16534 295 aa17.03■□□□□ 0.32
NELFE-203ENST00000426722 MAPK8IP3Q9UPT6 1336 aa17.02■□□□□ 0.32
NELFE-203ENST00000426722 DDNO94850 711 aaPredicted RBP17.02■□□□□ 0.32
NELFE-203ENST00000426722 CHADLQ6NUI6 762 aa17.02■□□□□ 0.32
NELFE-203ENST00000426722 ERBB4Q15303 1308 aa17.01■□□□□ 0.31
NELFE-203ENST00000426722 MAP3K15Q6ZN16 1313 aa17.01■□□□□ 0.31
NELFE-203ENST00000426722 CC2D2BQ6DHV5 1058 aa17.01■□□□□ 0.31
NELFE-203ENST00000426722 KIF6Q6ZMV9 814 aa17.01■□□□□ 0.31
NELFE-203ENST00000426722 L3MBTL3Q96JM7 780 aaPredicted RBP17.01■□□□□ 0.31
NELFE-203ENST00000426722 IBTKQ9P2D0 1353 aaPredicted RBP17.01■□□□□ 0.31
NELFE-203ENST00000426722 FAM177BA6PVY3 158 aa17■□□□□ 0.31
NELFE-203ENST00000426722 GRIPAP1Q4V328 841 aa17■□□□□ 0.31
NELFE-203ENST00000426722 RIC1Q4ADV7 1423 aa16.99■□□□□ 0.31
NELFE-203ENST00000426722 CRY2Q49AN0 593 aa16.99■□□□□ 0.31
NELFE-203ENST00000426722 NGEFQ8N5V2 710 aa16.99■□□□□ 0.31
NELFE-203ENST00000426722 CREBZFQ9NS37 354 aa16.99■□□□□ 0.31
NELFE-203ENST00000426722 BABAM1Q9NWV8 329 aa16.99■□□□□ 0.31
NELFE-203ENST00000426722 RRP7AQ9Y3A4 280 aaKnown RBP16.99■□□□□ 0.31
NELFE-203ENST00000426722 LDHDQ86WU2 507 aa16.98■□□□□ 0.31
NELFE-203ENST00000426722 PSMD1Q99460 953 aa16.98■□□□□ 0.31
NELFE-203ENST00000426722 IARSP41252 1262 aaKnown RBP16.97■□□□□ 0.31
NELFE-203ENST00000426722 RALBP1Q15311 655 aa16.97■□□□□ 0.31
NELFE-203ENST00000426722 TTLL7Q6ZT98 887 aa16.97■□□□□ 0.31
NELFE-203ENST00000426722 SYNE4Q8N205 404 aa16.97■□□□□ 0.31
NELFE-203ENST00000426722 TAF1DQ9H5J8 278 aaPredicted RBP16.97■□□□□ 0.31
NELFE-203ENST00000426722 ZNF277Q9NRM2 450 aaPredicted RBP16.97■□□□□ 0.31
NELFE-203ENST00000426722 FZD9O00144 591 aa16.96■□□□□ 0.31
NELFE-203ENST00000426722 MYL6BP14649 208 aa16.96■□□□□ 0.31
NELFE-203ENST00000426722 HOXA10P31260 410 aaPredicted RBP16.96■□□□□ 0.31
NELFE-203ENST00000426722 GIGYF2Q6Y7W6 1299 aaKnown RBP16.96■□□□□ 0.31
NELFE-203ENST00000426722 PPP1R42Q7Z4L9 355 aa16.96■□□□□ 0.31
NELFE-203ENST00000426722 ZNF34Q8IZ26 560 aa16.96■□□□□ 0.31
NELFE-203ENST00000426722 LMOD3Q0VAK6 560 aa16.95■□□□□ 0.3
NELFE-203ENST00000426722 PARP10Q53GL7 1025 aa16.95■□□□□ 0.3
NELFE-203ENST00000426722 NUTM1Q86Y26 1132 aa16.95■□□□□ 0.3
NELFE-203ENST00000426722 JDP2Q8WYK2 163 aa16.95■□□□□ 0.3
NELFE-203ENST00000426722 RPGRQ92834 1020 aaKnown RBP16.95■□□□□ 0.3
NELFE-203ENST00000426722 CRAMP1Q96RY5 1269 aa16.95■□□□□ 0.3
NELFE-203ENST00000426722 THUMPD2Q9BTF0 503 aaKnown RBP16.95■□□□□ 0.3
NELFE-203ENST00000426722 TSPYL4Q9UJ04 414 aa16.95■□□□□ 0.3
NELFE-203ENST00000426722 HACL1Q9UJ83 578 aa16.95■□□□□ 0.3
NELFE-203ENST00000426722 ABCC12Q96J65 1359 aa16.94■□□□□ 0.3
NELFE-203ENST00000426722 POTEIP0CG38 1075 aa16.94■□□□□ 0.3
NELFE-203ENST00000426722 POTEJP0CG39 1038 aa16.94■□□□□ 0.3
NELFE-203ENST00000426722 HSPA1AP0DMV8 641 aaKnown RBP16.94■□□□□ 0.3
NELFE-203ENST00000426722 HSPA1BP0DMV9 641 aaKnown RBP16.94■□□□□ 0.3
NELFE-203ENST00000426722 RIPK4P57078 832 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms