RNA–Protein interactions for RNA: ENST00000426713.1

LINC00116-202, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LINC00116, Length 461 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-202ENST00000426713 SRGNP10124 158 aa20.26■□□□□ 0.83
LINC00116-202ENST00000426713 CNGB1Q14028 1251 aaPredicted RBP20.26■□□□□ 0.83
LINC00116-202ENST00000426713 AMER1Q5JTC6 1135 aaPredicted RBP20.26■□□□□ 0.83
LINC00116-202ENST00000426713 U2SURPO15042 1029 aaKnown RBP20.25■□□□□ 0.83
LINC00116-202ENST00000426713 CC2D1BQ5T0F9 858 aaKnown RBP20.25■□□□□ 0.83
LINC00116-202ENST00000426713 FMNL2Q96PY5 1086 aa20.25■□□□□ 0.83
LINC00116-202ENST00000426713 TMEM88BA6NKF7 163 aa20.24■□□□□ 0.83
LINC00116-202ENST00000426713 GNAT3A8MTJ3 354 aa20.24■□□□□ 0.83
LINC00116-202ENST00000426713 CAMTA2O94983 1202 aa20.24■□□□□ 0.83
LINC00116-202ENST00000426713 CTCFP49711 727 aaPredicted RBP20.24■□□□□ 0.83
LINC00116-202ENST00000426713 NBPF5PQ86XG9 351 aaPredicted RBP20.24■□□□□ 0.83
LINC00116-202ENST00000426713 DZIP3Q86Y13 1208 aaKnown RBP20.24■□□□□ 0.83
LINC00116-202ENST00000426713 IL17REQ8NFR9 667 aa20.24■□□□□ 0.83
LINC00116-202ENST00000426713 TAF1DQ9H5J8 278 aaPredicted RBP20.24■□□□□ 0.83
LINC00116-202ENST00000426713 PRDM10Q9NQV6 1147 aa20.24■□□□□ 0.83
LINC00116-202ENST00000426713 SCN4AP35499 1836 aa20.24■□□□□ 0.83
LINC00116-202ENST00000426713 VEGFBP49765 207 aa20.23■□□□□ 0.83
LINC00116-202ENST00000426713 CCDC93Q567U6 631 aa20.23■□□□□ 0.83
LINC00116-202ENST00000426713 GAS2L2Q8NHY3 880 aa20.23■□□□□ 0.83
LINC00116-202ENST00000426713 ARFGEF2Q9Y6D5 1785 aa20.23■□□□□ 0.83
LINC00116-202ENST00000426713 PASKQ96RG2 1323 aa20.23■□□□□ 0.83
LINC00116-202ENST00000426713 PIP4K2AP48426 406 aaPredicted RBP20.22■□□□□ 0.83
LINC00116-202ENST00000426713 L3MBTL3Q96JM7 780 aaPredicted RBP20.21■□□□□ 0.83
LINC00116-202ENST00000426713 ZNF277Q9NRM2 450 aaPredicted RBP20.21■□□□□ 0.83
LINC00116-202ENST00000426713 HACL1Q9UJ83 578 aa20.21■□□□□ 0.83
LINC00116-202ENST00000426713 CLSPNQ9HAW4 1339 aa20.21■□□□□ 0.83
LINC00116-202ENST00000426713 BTBD11A6QL63 1104 aa20.2■□□□□ 0.82
LINC00116-202ENST00000426713 LBX1P52954 281 aa20.2■□□□□ 0.82
LINC00116-202ENST00000426713 BCORQ6W2J9 1755 aa20.2■□□□□ 0.82
LINC00116-202ENST00000426713 ZNF541Q9H0D2 1346 aa20.2■□□□□ 0.82
LINC00116-202ENST00000426713 SIPA1L3O60292 1781 aaPredicted RBP20.19■□□□□ 0.82
LINC00116-202ENST00000426713 FAM177BA6PVY3 158 aa20.19■□□□□ 0.82
LINC00116-202ENST00000426713 NPR1P16066 1061 aa20.19■□□□□ 0.82
LINC00116-202ENST00000426713 ZNF652Q9Y2D9 606 aa20.19■□□□□ 0.82
LINC00116-202ENST00000426713 KCNQ3O43525 872 aa20.18■□□□□ 0.82
LINC00116-202ENST00000426713 ITGBL1O95965 494 aaPredicted RBP20.18■□□□□ 0.82
LINC00116-202ENST00000426713 EPHX2P34913 555 aa20.18■□□□□ 0.82
LINC00116-202ENST00000426713 FKBP4Q02790 459 aaKnown RBP eCLIP20.18■□□□□ 0.82
LINC00116-202ENST00000426713 MAP1SQ66K74 1059 aaPredicted RBP20.17■□□□□ 0.82
LINC00116-202ENST00000426713 OLFM4Q6UX06 510 aa20.17■□□□□ 0.82
LINC00116-202ENST00000426713 ABT1Q9ULW3 272 aaKnown RBP20.17■□□□□ 0.82
LINC00116-202ENST00000426713 USP16Q9Y5T5 823 aa20.17■□□□□ 0.82
LINC00116-202ENST00000426713 RNF123Q5XPI4 1314 aa20.17■□□□□ 0.82
LINC00116-202ENST00000426713 DEFB115Q30KQ5 88 aa20.16■□□□□ 0.82
LINC00116-202ENST00000426713 TPTE2Q6XPS3 522 aa20.16■□□□□ 0.82
LINC00116-202ENST00000426713 PNMA8AQ86V59 439 aaPredicted RBP20.16■□□□□ 0.82
LINC00116-202ENST00000426713 CNTROBQ8N137 903 aa20.16■□□□□ 0.82
LINC00116-202ENST00000426713 C7orf43Q8WVR3 580 aa20.16■□□□□ 0.82
LINC00116-202ENST00000426713 WBP1LQ9NX94 342 aa20.16■□□□□ 0.82
LINC00116-202ENST00000426713 GTF2E1P29083 439 aaPredicted RBP20.15■□□□□ 0.82
LINC00116-202ENST00000426713 PAXIP1Q6ZW49 1069 aaPredicted RBP20.15■□□□□ 0.82
LINC00116-202ENST00000426713 RTKN2Q8IZC4 609 aa20.15■□□□□ 0.82
LINC00116-202ENST00000426713 NIP7Q9Y221 180 aaKnown RBP eCLIP20.15■□□□□ 0.82
LINC00116-202ENST00000426713 KIF7Q2M1P5 1343 aa20.15■□□□□ 0.82
LINC00116-202ENST00000426713 CLEC4GQ6UXB4 293 aa20.14■□□□□ 0.81
LINC00116-202ENST00000426713 PRAMEF22A3QJZ6 481 aa20.13■□□□□ 0.81
LINC00116-202ENST00000426713 IARSP41252 1262 aaKnown RBP20.13■□□□□ 0.81
LINC00116-202ENST00000426713 GRM1Q13255 1194 aa20.13■□□□□ 0.81
LINC00116-202ENST00000426713 SYNE4Q8N205 404 aa20.13■□□□□ 0.81
LINC00116-202ENST00000426713 JDP2Q8WYK2 163 aa20.13■□□□□ 0.81
LINC00116-202ENST00000426713 GJA3Q9Y6H8 435 aa20.13■□□□□ 0.81
LINC00116-202ENST00000426713 WDR33Q9C0J8 1336 aaKnown RBP20.12■□□□□ 0.81
LINC00116-202ENST00000426713 RASSF10A6NK89 507 aa20.11■□□□□ 0.81
LINC00116-202ENST00000426713 SNRPA1P09661 255 aaKnown RBP20.11■□□□□ 0.81
LINC00116-202ENST00000426713 HSPA8P11142 646 aaKnown RBP20.11■□□□□ 0.81
LINC00116-202ENST00000426713 ALDH1B1P30837 517 aa20.11■□□□□ 0.81
LINC00116-202ENST00000426713 PRKAR2BP31323 418 aa20.11■□□□□ 0.81
LINC00116-202ENST00000426713 MAP2K1Q02750 393 aaPredicted RBP20.11■□□□□ 0.81
LINC00116-202ENST00000426713 ABHD8Q96I13 439 aa20.11■□□□□ 0.81
LINC00116-202ENST00000426713 COL3A1P02461 1466 aaPredicted RBP20.11■□□□□ 0.81
LINC00116-202ENST00000426713 CEMIPQ8WUJ3 1361 aa20.1■□□□□ 0.81
LINC00116-202ENST00000426713 LMOD1P29536 600 aaPredicted RBP20.1■□□□□ 0.81
LINC00116-202ENST00000426713 GPC2Q8N158 579 aa20.1■□□□□ 0.81
LINC00116-202ENST00000426713 RTF1Q92541 710 aaKnown RBP20.1■□□□□ 0.81
LINC00116-202ENST00000426713 PHACTR3Q96KR7 559 aa20.1■□□□□ 0.81
LINC00116-202ENST00000426713 BEGAINQ9BUH8 593 aa20.1■□□□□ 0.81
LINC00116-202ENST00000426713 ADAMTSL1Q8N6G6 1762 aa20.1■□□□□ 0.81
LINC00116-202ENST00000426713 FZD9O00144 591 aa20.09■□□□□ 0.81
LINC00116-202ENST00000426713 PER1O15534 1290 aaPredicted RBP20.09■□□□□ 0.81
LINC00116-202ENST00000426713 EIF6P56537 245 aaKnown RBP20.09■□□□□ 0.81
LINC00116-202ENST00000426713 FAM161AQ3B820 660 aa20.09■□□□□ 0.81
LINC00116-202ENST00000426713 KLRG2A4D1S0 409 aaPredicted RBP20.08■□□□□ 0.81
LINC00116-202ENST00000426713 MCM10Q7L590 875 aa20.08■□□□□ 0.81
LINC00116-202ENST00000426713 NGEFQ8N5V2 710 aa20.07■□□□□ 0.8
LINC00116-202ENST00000426713 DDX21Q9NR30 783 aaKnown RBP eCLIP20.07■□□□□ 0.8
LINC00116-202ENST00000426713 CCDC85CA6NKD9 419 aa20.06■□□□□ 0.8
LINC00116-202ENST00000426713 HLFQ16534 295 aa20.06■□□□□ 0.8
LINC00116-202ENST00000426713 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
LINC00116-202ENST00000426713 CFAP53Q96M91 514 aa20.06■□□□□ 0.8
LINC00116-202ENST00000426713 NBPF26B4DH59 902 aa20.05■□□□□ 0.8
LINC00116-202ENST00000426713 NBPF10Q6P3W6 841 aaKnown RBP20.05■□□□□ 0.8
LINC00116-202ENST00000426713 NBPF15Q8N660 670 aa20.05■□□□□ 0.8
LINC00116-202ENST00000426713 RPGRQ92834 1020 aaKnown RBP20.05■□□□□ 0.8
LINC00116-202ENST00000426713 TCERG1O14776 1098 aaKnown RBP20.04■□□□□ 0.8
LINC00116-202ENST00000426713 ECE1P42892 770 aa20.04■□□□□ 0.8
LINC00116-202ENST00000426713 FMR1Q06787 632 aaKnown RBP eCLIP20.04■□□□□ 0.8
LINC00116-202ENST00000426713 NUTM1Q86Y26 1132 aa20.04■□□□□ 0.8
LINC00116-202ENST00000426713 LARGE2Q8N3Y3 721 aa20.04■□□□□ 0.8
LINC00116-202ENST00000426713 CAPNS2Q96L46 248 aa20.04■□□□□ 0.8
LINC00116-202ENST00000426713 PSMD1Q99460 953 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms