RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 EAPPQ56P03 285 aaPredicted RBP19.73■□□□□ 0.75
PDAP1-202ENST00000426447 NBPF5PQ86XG9 351 aaPredicted RBP19.73■□□□□ 0.75
PDAP1-202ENST00000426447 CLEC11AQ9Y240 323 aa19.73■□□□□ 0.75
PDAP1-202ENST00000426447 BTBD11A6QL63 1104 aa19.72■□□□□ 0.75
PDAP1-202ENST00000426447 TAF1DQ9H5J8 278 aaPredicted RBP19.72■□□□□ 0.75
PDAP1-202ENST00000426447 CNTNAP1P78357 1384 aa19.71■□□□□ 0.75
PDAP1-202ENST00000426447 CCDC93Q567U6 631 aa19.71■□□□□ 0.75
PDAP1-202ENST00000426447 TMEM88BA6NKF7 163 aa19.7■□□□□ 0.74
PDAP1-202ENST00000426447 CTCFP49711 727 aaPredicted RBP19.7■□□□□ 0.74
PDAP1-202ENST00000426447 PRDM10Q9NQV6 1147 aa19.7■□□□□ 0.74
PDAP1-202ENST00000426447 ZNF652Q9Y2D9 606 aa19.7■□□□□ 0.74
PDAP1-202ENST00000426447 ANKRD31Q8N7Z5 1873 aa19.7■□□□□ 0.74
PDAP1-202ENST00000426447 PASKQ96RG2 1323 aa19.7■□□□□ 0.74
PDAP1-202ENST00000426447 UBR2Q8IWV8 1755 aa19.7■□□□□ 0.74
PDAP1-202ENST00000426447 KCNQ3O43525 872 aa19.69■□□□□ 0.74
PDAP1-202ENST00000426447 NPR1P16066 1061 aa19.69■□□□□ 0.74
PDAP1-202ENST00000426447 PIP4K2AP48426 406 aaPredicted RBP19.69■□□□□ 0.74
PDAP1-202ENST00000426447 VEGFBP49765 207 aa19.69■□□□□ 0.74
PDAP1-202ENST00000426447 CLEC4GQ6UXB4 293 aa19.69■□□□□ 0.74
PDAP1-202ENST00000426447 L3MBTL3Q96JM7 780 aaPredicted RBP19.69■□□□□ 0.74
PDAP1-202ENST00000426447 HACL1Q9UJ83 578 aa19.69■□□□□ 0.74
PDAP1-202ENST00000426447 USP16Q9Y5T5 823 aa19.69■□□□□ 0.74
PDAP1-202ENST00000426447 FER1L6Q2WGJ9 1857 aa19.69■□□□□ 0.74
PDAP1-202ENST00000426447 PER1O15534 1290 aaPredicted RBP19.68■□□□□ 0.74
PDAP1-202ENST00000426447 FKBP4Q02790 459 aaKnown RBP eCLIP19.68■□□□□ 0.74
PDAP1-202ENST00000426447 TPTE2Q6XPS3 522 aa19.68■□□□□ 0.74
PDAP1-202ENST00000426447 C7orf43Q8WVR3 580 aa19.68■□□□□ 0.74
PDAP1-202ENST00000426447 ZNF277Q9NRM2 450 aaPredicted RBP19.68■□□□□ 0.74
PDAP1-202ENST00000426447 KIF7Q2M1P5 1343 aa19.68■□□□□ 0.74
PDAP1-202ENST00000426447 VIRMAQ69YN4 1812 aaKnown RBP19.67■□□□□ 0.74
PDAP1-202ENST00000426447 DICER1Q9UPY3 1922 aaKnown RBP19.67■□□□□ 0.74
PDAP1-202ENST00000426447 COL11A2P13942 1736 aaPredicted RBP19.66■□□□□ 0.74
PDAP1-202ENST00000426447 FAM177BA6PVY3 158 aa19.66■□□□□ 0.74
PDAP1-202ENST00000426447 ITGBL1O95965 494 aaPredicted RBP19.66■□□□□ 0.74
PDAP1-202ENST00000426447 EPHX2P34913 555 aa19.66■□□□□ 0.74
PDAP1-202ENST00000426447 PNMA8AQ86V59 439 aaPredicted RBP19.66■□□□□ 0.74
PDAP1-202ENST00000426447 RTKN2Q8IZC4 609 aa19.66■□□□□ 0.74
PDAP1-202ENST00000426447 SLX4Q8IY92 1834 aa19.66■□□□□ 0.74
PDAP1-202ENST00000426447 SCN7AQ01118 1682 aa19.65■□□□□ 0.74
PDAP1-202ENST00000426447 GTF2E1P29083 439 aaPredicted RBP19.65■□□□□ 0.74
PDAP1-202ENST00000426447 NIP7Q9Y221 180 aaKnown RBP eCLIP19.65■□□□□ 0.74
PDAP1-202ENST00000426447 SNRPA1P09661 255 aaKnown RBP19.64■□□□□ 0.73
PDAP1-202ENST00000426447 ALDH1B1P30837 517 aa19.64■□□□□ 0.73
PDAP1-202ENST00000426447 LBX1P52954 281 aa19.64■□□□□ 0.73
PDAP1-202ENST00000426447 DEFB115Q30KQ5 88 aa19.64■□□□□ 0.73
PDAP1-202ENST00000426447 CNTROBQ8N137 903 aa19.64■□□□□ 0.73
PDAP1-202ENST00000426447 CCER1Q8TC90 406 aaPredicted RBP19.64■□□□□ 0.73
PDAP1-202ENST00000426447 RTF1Q92541 710 aaKnown RBP19.64■□□□□ 0.73
PDAP1-202ENST00000426447 PHACTR3Q96KR7 559 aa19.64■□□□□ 0.73
PDAP1-202ENST00000426447 ZNF541Q9H0D2 1346 aa19.64■□□□□ 0.73
PDAP1-202ENST00000426447 PRAMEF22A3QJZ6 481 aa19.63■□□□□ 0.73
PDAP1-202ENST00000426447 PRKAR2BP31323 418 aa19.63■□□□□ 0.73
PDAP1-202ENST00000426447 OLFM4Q6UX06 510 aa19.63■□□□□ 0.73
PDAP1-202ENST00000426447 SYNE4Q8N205 404 aa19.63■□□□□ 0.73
PDAP1-202ENST00000426447 WBP1LQ9NX94 342 aa19.63■□□□□ 0.73
PDAP1-202ENST00000426447 CEMIPQ8WUJ3 1361 aa19.62■□□□□ 0.73
PDAP1-202ENST00000426447 KLRG2A4D1S0 409 aaPredicted RBP19.62■□□□□ 0.73
PDAP1-202ENST00000426447 IARSP41252 1262 aaKnown RBP19.62■□□□□ 0.73
PDAP1-202ENST00000426447 MAP1SQ66K74 1059 aaPredicted RBP19.62■□□□□ 0.73
PDAP1-202ENST00000426447 ABT1Q9ULW3 272 aaKnown RBP19.62■□□□□ 0.73
PDAP1-202ENST00000426447 RNF123Q5XPI4 1314 aa19.61■□□□□ 0.73
PDAP1-202ENST00000426447 JDP2Q8WYK2 163 aa19.61■□□□□ 0.73
PDAP1-202ENST00000426447 CFAP53Q96M91 514 aa19.61■□□□□ 0.73
PDAP1-202ENST00000426447 FZD9O00144 591 aa19.6■□□□□ 0.73
PDAP1-202ENST00000426447 GPC2Q8N158 579 aa19.6■□□□□ 0.73
PDAP1-202ENST00000426447 SCN4AP35499 1836 aa19.6■□□□□ 0.73
PDAP1-202ENST00000426447 CACNA1SQ13698 1873 aa19.59■□□□□ 0.73
PDAP1-202ENST00000426447 RASSF10A6NK89 507 aa19.59■□□□□ 0.73
PDAP1-202ENST00000426447 MAP2K1Q02750 393 aaPredicted RBP19.59■□□□□ 0.73
PDAP1-202ENST00000426447 MCM10Q7L590 875 aa19.59■□□□□ 0.73
PDAP1-202ENST00000426447 NUDCQ9Y266 331 aa19.59■□□□□ 0.73
PDAP1-202ENST00000426447 GJA3Q9Y6H8 435 aa19.59■□□□□ 0.73
PDAP1-202ENST00000426447 WDR33Q9C0J8 1336 aaKnown RBP19.58■□□□□ 0.73
PDAP1-202ENST00000426447 EIF6P56537 245 aaKnown RBP19.58■□□□□ 0.72
PDAP1-202ENST00000426447 COL3A1P02461 1466 aaPredicted RBP19.57■□□□□ 0.72
PDAP1-202ENST00000426447 NBPF26B4DH59 902 aa19.57■□□□□ 0.72
PDAP1-202ENST00000426447 RGL2O15211 777 aa19.57■□□□□ 0.72
PDAP1-202ENST00000426447 LMOD1P29536 600 aaPredicted RBP19.57■□□□□ 0.72
PDAP1-202ENST00000426447 NBPF10Q6P3W6 841 aaKnown RBP19.57■□□□□ 0.72
PDAP1-202ENST00000426447 PAXIP1Q6ZW49 1069 aaPredicted RBP19.57■□□□□ 0.72
PDAP1-202ENST00000426447 NBPF15Q8N660 670 aa19.57■□□□□ 0.72
PDAP1-202ENST00000426447 RSPH6AQ9H0K4 717 aa19.57■□□□□ 0.72
PDAP1-202ENST00000426447 HLFQ16534 295 aa19.56■□□□□ 0.72
PDAP1-202ENST00000426447 NGEFQ8N5V2 710 aa19.56■□□□□ 0.72
PDAP1-202ENST00000426447 SIPA1L3O60292 1781 aaPredicted RBP19.55■□□□□ 0.72
PDAP1-202ENST00000426447 U2AF1L5P0DN76 240 aaPredicted RBP19.55■□□□□ 0.72
PDAP1-202ENST00000426447 HSPA8P11142 646 aaKnown RBP19.55■□□□□ 0.72
PDAP1-202ENST00000426447 U2AF1Q01081 240 aaKnown RBP eCLIP19.55■□□□□ 0.72
PDAP1-202ENST00000426447 ABHD8Q96I13 439 aa19.55■□□□□ 0.72
PDAP1-202ENST00000426447 PSMD1Q99460 953 aa19.55■□□□□ 0.72
PDAP1-202ENST00000426447 BEGAINQ9BUH8 593 aa19.55■□□□□ 0.72
PDAP1-202ENST00000426447 NYXQ9GZU5 481 aa19.55■□□□□ 0.72
PDAP1-202ENST00000426447 DDX21Q9NR30 783 aaKnown RBP eCLIP19.55■□□□□ 0.72
PDAP1-202ENST00000426447 ARFGEF2Q9Y6D5 1785 aa19.55■□□□□ 0.72
PDAP1-202ENST00000426447 GRM1Q13255 1194 aa19.54■□□□□ 0.72
PDAP1-202ENST00000426447 DCTN1Q14203 1278 aa19.54■□□□□ 0.72
PDAP1-202ENST00000426447 CC2D2BQ6DHV5 1058 aa19.54■□□□□ 0.72
PDAP1-202ENST00000426447 RPGRQ92834 1020 aaKnown RBP19.54■□□□□ 0.72
PDAP1-202ENST00000426447 BCORQ6W2J9 1755 aa19.54■□□□□ 0.72
PDAP1-202ENST00000426447 NPC1L1Q9UHC9 1359 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms