RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 SSFA2P28290 1259 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 COPS6Q7L5N1 327 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 CATIPQ7Z7H3 387 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 A2MP01023 1474 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 MEIS3Q99687 375 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 NCKAP5LQ9HCH0 1330 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 SMTNL1A8MU46 457 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 HMGB1P09429 215 aaKnown RBP9.23□□□□□ -0.93
CTNND1-207ENST00000426142 HMGB2P26583 209 aaKnown RBP9.23□□□□□ -0.93
CTNND1-207ENST00000426142 ST5P78524 1137 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 TMEM67Q5HYA8 995 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 GDPD2Q9HCC8 539 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 PTPRKQ15262 1439 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 SLF2Q8IX21 1173 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 RNF41Q9H4P4 317 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-207ENST00000426142 LIMCH1Q9UPQ0 1083 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 UNC13AQ9UPW8 1703 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 EIF4A2Q14240 407 aaKnown RBP9.22□□□□□ -0.93
CTNND1-207ENST00000426142 MICU3Q86XE3 530 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 CUL5Q93034 780 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 DUOX2Q9NRD8 1548 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 TSPY2A6NKD2 308 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 NEFHP12036 1026 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 TTF1Q15361 905 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-207ENST00000426142 C8orf58Q8NAV2 365 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 SH2B1Q9NRF2 756 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-207ENST00000426142 CCDC194A0A1B0GVG4 234 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 GJB2P29033 226 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 ENOX2Q16206 610 aaKnown RBP9.22□□□□□ -0.93
CTNND1-207ENST00000426142 KIAA1328Q86T90 577 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 FEZ1Q99689 392 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 CENPHQ9H3R5 247 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 CCDC152Q4G0S7 254 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 CKAP2LQ8IYA6 745 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 PANK2Q9BZ23 570 aa9.22□□□□□ -0.93
CTNND1-207ENST00000426142 TFIP11Q9UBB9 837 aaKnown RBP9.22□□□□□ -0.93
CTNND1-207ENST00000426142 FAM193AP78312 1265 aa9.21□□□□□ -0.93
CTNND1-207ENST00000426142 IL27Q8NEV9 243 aa9.21□□□□□ -0.93
CTNND1-207ENST00000426142 NPHP3Q7Z494 1330 aa9.21□□□□□ -0.93
CTNND1-207ENST00000426142 TTC21AQ8NDW8 1320 aa9.21□□□□□ -0.93
CTNND1-207ENST00000426142 TRAPPC8Q9Y2L5 1435 aa9.21□□□□□ -0.93
CTNND1-207ENST00000426142 MAP3K9P80192 1104 aa9.21□□□□□ -0.93
CTNND1-207ENST00000426142 USP16Q9Y5T5 823 aa9.21□□□□□ -0.93
CTNND1-207ENST00000426142 EPB41L2O43491 1005 aaKnown RBP9.21□□□□□ -0.94
CTNND1-207ENST00000426142 ERLIN2O94905 339 aa9.21□□□□□ -0.94
CTNND1-207ENST00000426142 MTHFSDQ2M296 383 aaKnown RBP9.21□□□□□ -0.94
CTNND1-207ENST00000426142 MFSD6Q6ZSS7 791 aa9.21□□□□□ -0.94
CTNND1-207ENST00000426142 CCDC112Q8NEF3 446 aa9.21□□□□□ -0.94
CTNND1-207ENST00000426142 TTC22Q5TAA0 569 aa9.21□□□□□ -0.94
CTNND1-207ENST00000426142 NFATC2IPQ8NCF5 419 aa9.21□□□□□ -0.94
CTNND1-207ENST00000426142 SETDB2Q96T68 719 aa9.21□□□□□ -0.94
CTNND1-207ENST00000426142 ITSN2Q9NZM3 1697 aa9.21□□□□□ -0.94
CTNND1-207ENST00000426142 RHPN1Q8TCX5 695 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 LRRC2Q9BYS8 371 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 KAT14Q9H8E8 782 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 NUP153P49790 1475 aaKnown RBP9.2□□□□□ -0.94
CTNND1-207ENST00000426142 ANKRD62A6NC57 917 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 DDB1Q16531 1140 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 TBC1D2Q9BYX2 928 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 SLC26A6Q9BXS9 759 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 NIP7Q9Y221 180 aaKnown RBP eCLIP9.2□□□□□ -0.94
CTNND1-207ENST00000426142 UGGT2Q9NYU1 1516 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 TEX14Q8IWB6 1497 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 ASXL1Q8IXJ9 1541 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 TOM1O60784 492 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 BAG3O95817 575 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 PA2G4Q9UQ80 394 aaKnown RBP9.2□□□□□ -0.94
CTNND1-207ENST00000426142 WDR7Q9Y4E6 1490 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 ZNF518AQ6AHZ1 1483 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 BIN1O00499 593 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 PDE4BQ07343 736 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 TMEM266Q2M3C6 531 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 AKAP4Q5JQC9 854 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 ISM2Q6H9L7 571 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 ANKRD18AQ8IVF6 992 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 NEK1Q96PY6 1258 aa9.2□□□□□ -0.94
CTNND1-207ENST00000426142 METAP2P50579 478 aaKnown RBP eCLIP9.19□□□□□ -0.94
CTNND1-207ENST00000426142 KRT24Q2M2I5 525 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 LMBR1LQ6UX01 489 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 C16orf71Q8IYS4 520 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-207ENST00000426142 SCAND2PQ9GZW5 306 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-207ENST00000426142 PPP1R12BO60237 982 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-207ENST00000426142 IARSP41252 1262 aaKnown RBP9.19□□□□□ -0.94
CTNND1-207ENST00000426142 PICALMQ13492 652 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 CNNM3Q8NE01 707 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 SIRT1Q96EB6 747 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 TCEANC2Q96MN5 208 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 PPP4R3AQ6IN85 833 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 TXLNBQ8N3L3 684 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 FSIP1Q8NA03 581 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 ZNF397Q8NF99 534 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-207ENST00000426142 TSG101Q99816 390 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 TMX1Q9H3N1 280 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 IL16Q14005 1332 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 LDHCP07864 332 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 CYP7A1P22680 504 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 HMGN5P82970 282 aaKnown RBP9.19□□□□□ -0.94
CTNND1-207ENST00000426142 CPLX3Q8WVH0 158 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 POLKQ9UBT6 870 aa9.19□□□□□ -0.94
CTNND1-207ENST00000426142 GOLGA6L10A6NI86 522 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 339.5 ms