RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 TTLL7Q6ZT98 887 aa28.18■■■□□ 2.1
HMGA2-205ENST00000425208 BCL2L12Q9HB09 334 aa28.18■■■□□ 2.1
HMGA2-205ENST00000425208 ZNF652Q9Y2D9 606 aa28.18■■■□□ 2.1
HMGA2-205ENST00000425208 MAP3K15Q6ZN16 1313 aa28.18■■■□□ 2.1
HMGA2-205ENST00000425208 XAGE3Q8WTP9 111 aa28.18■■■□□ 2.1
HMGA2-205ENST00000425208 RGL2O15211 777 aa28.17■■■□□ 2.1
HMGA2-205ENST00000425208 AIMP1Q12904 312 aaKnown RBP28.17■■■□□ 2.1
HMGA2-205ENST00000425208 COPS6Q7L5N1 327 aa28.17■■■□□ 2.1
HMGA2-205ENST00000425208 TCERG1O14776 1098 aaKnown RBP28.16■■■□□ 2.1
HMGA2-205ENST00000425208 MMP10P09238 476 aa28.16■■■□□ 2.1
HMGA2-205ENST00000425208 CLEC4GQ6UXB4 293 aa28.16■■■□□ 2.1
HMGA2-205ENST00000425208 NUP98P52948 1817 aa28.15■■■□□ 2.1
HMGA2-205ENST00000425208 ERVV-1B6SEH8 477 aa28.15■■■□□ 2.1
HMGA2-205ENST00000425208 ZBTB3Q9H5J0 574 aa28.15■■■□□ 2.1
HMGA2-205ENST00000425208 PPP1R1BQ9UD71 204 aaPredicted RBP28.15■■■□□ 2.1
HMGA2-205ENST00000425208 SLC4A2P04920 1241 aa28.13■■■□□ 2.09
HMGA2-205ENST00000425208 CT47B1P0C2W7 299 aaPredicted RBP28.13■■■□□ 2.09
HMGA2-205ENST00000425208 ZNF428Q96B54 188 aa28.12■■■□□ 2.09
HMGA2-205ENST00000425208 PHAXQ9H814 394 aaKnown RBP28.12■■■□□ 2.09
HMGA2-205ENST00000425208 NFIXQ14938 502 aa28.11■■■□□ 2.09
HMGA2-205ENST00000425208 HLFQ16534 295 aa28.11■■■□□ 2.09
HMGA2-205ENST00000425208 TBC1D9BQ66K14 1250 aa28.11■■■□□ 2.09
HMGA2-205ENST00000425208 PARP3Q9Y6F1 533 aa28.11■■■□□ 2.09
HMGA2-205ENST00000425208 TM4SF1P30408 202 aa28.1■■■□□ 2.09
HMGA2-205ENST00000425208 BICDL1Q6ZP65 573 aa28.1■■■□□ 2.09
HMGA2-205ENST00000425208 GIGYF2Q6Y7W6 1299 aaKnown RBP28.09■■■□□ 2.09
HMGA2-205ENST00000425208 YTHDC1Q96MU7 727 aaKnown RBP28.09■■■□□ 2.09
HMGA2-205ENST00000425208 ARFGEF2Q9Y6D5 1785 aa28.09■■■□□ 2.09
HMGA2-205ENST00000425208 DDR1Q08345 913 aa28.09■■■□□ 2.09
HMGA2-205ENST00000425208 ANKRD13DQ6ZTN6 518 aa28.09■■■□□ 2.09
HMGA2-205ENST00000425208 PLBD2Q8NHP8 589 aa28.09■■■□□ 2.09
HMGA2-205ENST00000425208 SETDB2Q96T68 719 aa28.09■■■□□ 2.09
HMGA2-205ENST00000425208 CARMIL3Q8ND23 1372 aa28.08■■■□□ 2.09
HMGA2-205ENST00000425208 ATP10DQ9P241 1426 aa28.08■■■□□ 2.09
HMGA2-205ENST00000425208 ANKRD36CQ5JPF3 1778 aa28.08■■■□□ 2.09
HMGA2-205ENST00000425208 POLRMTO00411 1230 aaKnown RBP28.08■■■□□ 2.09
HMGA2-205ENST00000425208 DDX58O95786 925 aaKnown RBP28.08■■■□□ 2.09
HMGA2-205ENST00000425208 NIP7Q9Y221 180 aaKnown RBP eCLIP28.07■■■□□ 2.08
HMGA2-205ENST00000425208 AFDNP55196 1824 aaKnown RBP28.07■■■□□ 2.08
HMGA2-205ENST00000425208 FLIIQ13045 1269 aa28.06■■■□□ 2.08
HMGA2-205ENST00000425208 HSP90AB3PQ58FF7 597 aa28.06■■■□□ 2.08
HMGA2-205ENST00000425208 G2E3Q7L622 706 aa28.05■■■□□ 2.08
HMGA2-205ENST00000425208 RIC3Q7Z5B4 369 aa28.05■■■□□ 2.08
HMGA2-205ENST00000425208 NRXN2Q9P2S2 1712 aa28.05■■■□□ 2.08
HMGA2-205ENST00000425208 ALDH1L2Q3SY69 923 aa28.04■■■□□ 2.08
HMGA2-205ENST00000425208 SSH1Q8WYL5 1049 aa28.03■■■□□ 2.08
HMGA2-205ENST00000425208 SERPINB2P05120 415 aa28.02■■■□□ 2.08
HMGA2-205ENST00000425208 FKBP5Q13451 457 aaPredicted RBP28.02■■■□□ 2.08
HMGA2-205ENST00000425208 KLHL34Q8N239 644 aa28.02■■■□□ 2.08
HMGA2-205ENST00000425208 GPTP24298 496 aa28.01■■■□□ 2.08
HMGA2-205ENST00000425208 KSR2Q6VAB6 950 aa28.01■■■□□ 2.08
HMGA2-205ENST00000425208 SMC4Q9NTJ3 1288 aa28.01■■■□□ 2.08
HMGA2-205ENST00000425208 ZNF34Q8IZ26 560 aa28.01■■■□□ 2.07
HMGA2-205ENST00000425208 MRPL50Q8N5N7 158 aaKnown RBP28.01■■■□□ 2.07
HMGA2-205ENST00000425208 BCL2L13Q9BXK5 485 aa28.01■■■□□ 2.07
HMGA2-205ENST00000425208 FHDC1Q9C0D6 1143 aaPredicted RBP28.01■■■□□ 2.07
HMGA2-205ENST00000425208 KIF13BQ9NQT8 1826 aa28■■■□□ 2.07
HMGA2-205ENST00000425208 PI4KAP2A4QPH2 592 aa28■■■□□ 2.07
HMGA2-205ENST00000425208 TCIRG1Q13488 830 aa28■■■□□ 2.07
HMGA2-205ENST00000425208 PI4KAP1Q8N8J0 262 aa28■■■□□ 2.07
HMGA2-205ENST00000425208 C10orf71Q711Q0 1435 aa28■■■□□ 2.07
HMGA2-205ENST00000425208 ADCY9O60503 1353 aa27.99■■■□□ 2.07
HMGA2-205ENST00000425208 NPHP1O15259 732 aa27.99■■■□□ 2.07
HMGA2-205ENST00000425208 PARP10Q53GL7 1025 aa27.99■■■□□ 2.07
HMGA2-205ENST00000425208 NBPF5PQ86XG9 351 aaPredicted RBP27.99■■■□□ 2.07
HMGA2-205ENST00000425208 MAP3K2Q9Y2U5 619 aa27.99■■■□□ 2.07
HMGA2-205ENST00000425208 UBN2Q6ZU65 1347 aa27.98■■■□□ 2.07
HMGA2-205ENST00000425208 CNBD1Q8NA66 436 aa27.98■■■□□ 2.07
HMGA2-205ENST00000425208 CD2APQ9Y5K6 639 aa27.98■■■□□ 2.07
HMGA2-205ENST00000425208 RARSP54136 660 aaKnown RBP27.97■■■□□ 2.07
HMGA2-205ENST00000425208 IBTKQ9P2D0 1353 aaPredicted RBP27.97■■■□□ 2.07
HMGA2-205ENST00000425208 FAM177BA6PVY3 158 aa27.96■■■□□ 2.07
HMGA2-205ENST00000425208 PRR5LQ6MZQ0 368 aa27.96■■■□□ 2.07
HMGA2-205ENST00000425208 METTL22Q9BUU2 404 aaPredicted RBP27.96■■■□□ 2.07
HMGA2-205ENST00000425208 NYXQ9GZU5 481 aa27.96■■■□□ 2.07
HMGA2-205ENST00000425208 TPTE2Q6XPS3 522 aa27.95■■■□□ 2.07
HMGA2-205ENST00000425208 MYD88Q99836 296 aa27.95■■■□□ 2.07
HMGA2-205ENST00000425208 PTPRCP08575 1304 aa27.95■■■□□ 2.06
HMGA2-205ENST00000425208 ST5P78524 1137 aa27.94■■■□□ 2.06
HMGA2-205ENST00000425208 NEXNQ0ZGT2 675 aa27.94■■■□□ 2.06
HMGA2-205ENST00000425208 PPP1R42Q7Z4L9 355 aa27.94■■■□□ 2.06
HMGA2-205ENST00000425208 NLRP10Q86W26 655 aa27.94■■■□□ 2.06
HMGA2-205ENST00000425208 SYT17Q9BSW7 474 aa27.94■■■□□ 2.06
HMGA2-205ENST00000425208 ISCA1Q9BUE6 129 aa27.94■■■□□ 2.06
HMGA2-205ENST00000425208 ATP5J2-PTCD1G3V325 749 aa27.93■■■□□ 2.06
HMGA2-205ENST00000425208 DNAAF4Q8WXU2 420 aa27.93■■■□□ 2.06
HMGA2-205ENST00000425208 GTF2E1P29083 439 aaPredicted RBP27.92■■■□□ 2.06
HMGA2-205ENST00000425208 BRPF1P55201 1214 aaPredicted RBP27.92■■■□□ 2.06
HMGA2-205ENST00000425208 SUSD4Q5VX71 490 aa27.92■■■□□ 2.06
HMGA2-205ENST00000425208 TRIM28Q13263 835 aaKnown RBP27.92■■■□□ 2.06
HMGA2-205ENST00000425208 UTP14AQ9BVJ6 771 aaKnown RBP27.91■■■□□ 2.06
HMGA2-205ENST00000425208 RNF123Q5XPI4 1314 aa27.9■■■□□ 2.06
HMGA2-205ENST00000425208 KIF16BQ96L93 1317 aa27.9■■■□□ 2.06
HMGA2-205ENST00000425208 ANKRD31Q8N7Z5 1873 aa27.9■■■□□ 2.06
HMGA2-205ENST00000425208 NTSR2O95665 410 aa27.9■■■□□ 2.06
HMGA2-205ENST00000425208 F6X3S4 739 aa27.89■■■□□ 2.06
HMGA2-205ENST00000425208 NUTM1Q86Y26 1132 aa27.89■■■□□ 2.06
HMGA2-205ENST00000425208 CCDC24Q8N4L8 307 aa27.89■■■□□ 2.06
HMGA2-205ENST00000425208 CCDC191Q8NCU4 936 aa27.89■■■□□ 2.06
HMGA2-205ENST00000425208 KIAA1551Q9HCM1 1747 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms