RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 ARXQ96QS3 562 aa13.02□□□□□ -0.33
MDC1-205ENST00000425072 TNNQ9UQP3 1299 aa13.02□□□□□ -0.33
MDC1-205ENST00000425072 MAP3K2Q9Y2U5 619 aa13.02□□□□□ -0.33
MDC1-205ENST00000425072 APBA3O96018 575 aa13.01□□□□□ -0.33
MDC1-205ENST00000425072 CRKLP46109 303 aaKnown RBP13.01□□□□□ -0.33
MDC1-205ENST00000425072 ITPK1Q13572 414 aa13.01□□□□□ -0.33
MDC1-205ENST00000425072 INTS5Q6P9B9 1019 aaKnown RBP13.01□□□□□ -0.33
MDC1-205ENST00000425072 LRP10Q7Z4F1 713 aa13.01□□□□□ -0.33
MDC1-205ENST00000425072 LINS1Q8NG48 757 aa13.01□□□□□ -0.33
MDC1-205ENST00000425072 METTL22Q9BUU2 404 aaPredicted RBP13.01□□□□□ -0.33
MDC1-205ENST00000425072 ZBTB40Q9NUA8 1239 aa13.01□□□□□ -0.33
MDC1-205ENST00000425072 ZNF831Q5JPB2 1677 aa13.01□□□□□ -0.33
MDC1-205ENST00000425072 BTAF1O14981 1849 aa13.01□□□□□ -0.33
MDC1-205ENST00000425072 LAMB4A4D0S4 1761 aa13□□□□□ -0.33
MDC1-205ENST00000425072 C5P01031 1676 aa13□□□□□ -0.33
MDC1-205ENST00000425072 ERVV-1B6SEH8 477 aa13□□□□□ -0.33
MDC1-205ENST00000425072 EIF5P55010 431 aaKnown RBP13□□□□□ -0.33
MDC1-205ENST00000425072 SF3B2Q13435 895 aaKnown RBP13□□□□□ -0.33
MDC1-205ENST00000425072 HSP90AB3PQ58FF7 597 aa13□□□□□ -0.33
MDC1-205ENST00000425072 CCDC125Q86Z20 511 aa13□□□□□ -0.33
MDC1-205ENST00000425072 CNTNAP4Q9C0A0 1308 aa12.99□□□□□ -0.33
MDC1-205ENST00000425072 RPS6KA4O75676 772 aa12.99□□□□□ -0.33
MDC1-205ENST00000425072 PIP4K2AP48426 406 aaPredicted RBP12.99□□□□□ -0.33
MDC1-205ENST00000425072 BEND3Q5T5X7 828 aa12.99□□□□□ -0.33
MDC1-205ENST00000425072 RWDD1Q9H446 243 aaPredicted RBP12.99□□□□□ -0.33
MDC1-205ENST00000425072 ZBTB1Q9Y2K1 713 aa12.99□□□□□ -0.33
MDC1-205ENST00000425072 ZNF330Q9Y3S2 320 aaPredicted RBP12.99□□□□□ -0.33
MDC1-205ENST00000425072 YY1P25490 414 aa12.98□□□□□ -0.33
MDC1-205ENST00000425072 TXNRD1Q16881 649 aa12.98□□□□□ -0.33
MDC1-205ENST00000425072 TTLL7Q6ZT98 887 aa12.98□□□□□ -0.33
MDC1-205ENST00000425072 C9orf78Q9NZ63 289 aaPredicted RBP12.98□□□□□ -0.33
MDC1-205ENST00000425072 RTCBQ9Y3I0 505 aaKnown RBP12.98□□□□□ -0.33
MDC1-205ENST00000425072 ADCY9O60503 1353 aa12.97□□□□□ -0.33
MDC1-205ENST00000425072 MAP3K15Q6ZN16 1313 aa12.97□□□□□ -0.33
MDC1-205ENST00000425072 RGL2O15211 777 aa12.97□□□□□ -0.33
MDC1-205ENST00000425072 MYCNP04198 464 aaPredicted RBP12.97□□□□□ -0.33
MDC1-205ENST00000425072 TRIM28Q13263 835 aaKnown RBP12.97□□□□□ -0.33
MDC1-205ENST00000425072 TCIRG1Q13488 830 aa12.97□□□□□ -0.33
MDC1-205ENST00000425072 TRAPPC3LQ5T215 181 aa12.97□□□□□ -0.33
MDC1-205ENST00000425072 DZIP3Q86Y13 1208 aaKnown RBP12.97□□□□□ -0.33
MDC1-205ENST00000425072 RPAP2Q8IXW5 612 aaPredicted RBP12.97□□□□□ -0.33
MDC1-205ENST00000425072 LINC00116Q8NCU8 138 aa12.97□□□□□ -0.33
MDC1-205ENST00000425072 MYD88Q99836 296 aa12.97□□□□□ -0.33
MDC1-205ENST00000425072 ATP10DQ9P241 1426 aa12.96□□□□□ -0.33
MDC1-205ENST00000425072 IBTKQ9P2D0 1353 aaPredicted RBP12.96□□□□□ -0.33
MDC1-205ENST00000425072 GNAI2P04899 355 aa12.96□□□□□ -0.33
MDC1-205ENST00000425072 CLEC4GQ6UXB4 293 aa12.96□□□□□ -0.33
MDC1-205ENST00000425072 GIGYF2Q6Y7W6 1299 aaKnown RBP12.96□□□□□ -0.33
MDC1-205ENST00000425072 CCDC191Q8NCU4 936 aa12.96□□□□□ -0.33
MDC1-205ENST00000425072 AK7Q96M32 723 aa12.96□□□□□ -0.33
MDC1-205ENST00000425072 USP44Q9H0E7 712 aa12.96□□□□□ -0.33
MDC1-205ENST00000425072 ZNF652Q9Y2D9 606 aa12.96□□□□□ -0.33
MDC1-205ENST00000425072 PXDNLA1KZ92 1463 aa12.96□□□□□ -0.34
MDC1-205ENST00000425072 UBTFL1P0CB47 393 aaPredicted RBP12.95□□□□□ -0.34
MDC1-205ENST00000425072 ZBTB3Q9H5J0 574 aa12.95□□□□□ -0.34
MDC1-205ENST00000425072 TBC1D2BQ9UPU7 963 aa12.95□□□□□ -0.34
MDC1-205ENST00000425072 LY75O60449 1722 aa12.95□□□□□ -0.34
MDC1-205ENST00000425072 CICQ96RK0 1608 aaPredicted RBP12.95□□□□□ -0.34
MDC1-205ENST00000425072 TJP1Q07157 1748 aa12.94□□□□□ -0.34
MDC1-205ENST00000425072 NEURL1BA8MQ27 555 aa12.94□□□□□ -0.34
MDC1-205ENST00000425072 ZPR1O75312 459 aa12.94□□□□□ -0.34
MDC1-205ENST00000425072 BAG6P46379 1132 aa12.94□□□□□ -0.34
MDC1-205ENST00000425072 KCNQ4P56696 695 aa12.94□□□□□ -0.34
MDC1-205ENST00000425072 GCKRQ14397 625 aa12.94□□□□□ -0.34
MDC1-205ENST00000425072 B4GALNT3Q6L9W6 998 aa12.94□□□□□ -0.34
MDC1-205ENST00000425072 PROM2Q8N271 834 aa12.94□□□□□ -0.34
MDC1-205ENST00000425072 FLAD1Q8NFF5 587 aa12.94□□□□□ -0.34
MDC1-205ENST00000425072 LRRC4BQ9NT99 713 aa12.94□□□□□ -0.34
MDC1-205ENST00000425072 CWC25Q9NXE8 425 aaPredicted RBP12.94□□□□□ -0.34
MDC1-205ENST00000425072 MYH14Q7Z406 1995 aaKnown RBP12.93□□□□□ -0.34
MDC1-205ENST00000425072 GRM8O00222 908 aa12.93□□□□□ -0.34
MDC1-205ENST00000425072 GNPATO15228 680 aa12.93□□□□□ -0.34
MDC1-205ENST00000425072 HMMRO75330 724 aa12.93□□□□□ -0.34
MDC1-205ENST00000425072 IGKV5-2P06315 115 aa12.93□□□□□ -0.34
MDC1-205ENST00000425072 RFC4P35249 363 aa12.93□□□□□ -0.34
MDC1-205ENST00000425072 MEIS3Q99687 375 aa12.93□□□□□ -0.34
MDC1-205ENST00000425072 ISCA1Q9BUE6 129 aa12.93□□□□□ -0.34
MDC1-205ENST00000425072 NARFQ9UHQ1 456 aa12.93□□□□□ -0.34
MDC1-205ENST00000425072 PCDHB15Q9Y5E8 787 aa12.93□□□□□ -0.34
MDC1-205ENST00000425072 UTYO14607 1347 aa12.92□□□□□ -0.34
MDC1-205ENST00000425072 ATP5J2-PTCD1G3V325 749 aa12.92□□□□□ -0.34
MDC1-205ENST00000425072 HSP90B1P14625 803 aaKnown RBP12.92□□□□□ -0.34
MDC1-205ENST00000425072 HDAC1Q13547 482 aaPredicted RBP12.92□□□□□ -0.34
MDC1-205ENST00000425072 CWF19L2Q2TBE0 894 aaKnown RBP12.92□□□□□ -0.34
MDC1-205ENST00000425072 CENPQQ7L2Z9 268 aaPredicted RBP12.92□□□□□ -0.34
MDC1-205ENST00000425072 H7C1W4 665 aa12.91□□□□□ -0.34
MDC1-205ENST00000425072 SSFA2P28290 1259 aa12.91□□□□□ -0.34
MDC1-205ENST00000425072 ATP8B2P98198 1209 aa12.91□□□□□ -0.34
MDC1-205ENST00000425072 PARP10Q53GL7 1025 aa12.91□□□□□ -0.34
MDC1-205ENST00000425072 ANKRD44Q8N8A2 993 aa12.91□□□□□ -0.34
MDC1-205ENST00000425072 ARHGEF1Q92888 912 aaKnown RBP12.91□□□□□ -0.34
MDC1-205ENST00000425072 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
MDC1-205ENST00000425072 TAF1LQ8IZX4 1826 aa12.9□□□□□ -0.34
MDC1-205ENST00000425072 CAMTA2O94983 1202 aa12.9□□□□□ -0.34
MDC1-205ENST00000425072 NBPF7P0C2Y1 421 aaPredicted RBP12.9□□□□□ -0.34
MDC1-205ENST00000425072 HLFQ16534 295 aa12.9□□□□□ -0.34
MDC1-205ENST00000425072 PPP1R42Q7Z4L9 355 aa12.9□□□□□ -0.34
MDC1-205ENST00000425072 ZNF34Q8IZ26 560 aa12.9□□□□□ -0.34
MDC1-205ENST00000425072 CAMKK2Q96RR4 588 aa12.9□□□□□ -0.34
MDC1-205ENST00000425072 TFCP2L1Q9NZI6 479 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms