RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 SLC4A2P04920 1241 aa13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 G2E3Q7L622 706 aa13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 TTC6Q86TZ1 520 aa13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 ZNF397Q8NF99 534 aaPredicted RBP13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 ESF1Q9H501 851 aaKnown RBP13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
SEC61A1-202ENST00000424880 CALCOCO1Q9P1Z2 691 aa13.4□□□□□ -0.26
SEC61A1-202ENST00000424880 ATP10DQ9P241 1426 aa13.4□□□□□ -0.26
SEC61A1-202ENST00000424880 PNMA6EA0A0J9YXQ4 647 aa13.4□□□□□ -0.26
SEC61A1-202ENST00000424880 FCHSD2O94868 740 aa13.4□□□□□ -0.26
SEC61A1-202ENST00000424880 CEBPAP49715 358 aaPredicted RBP13.4□□□□□ -0.26
SEC61A1-202ENST00000424880 PTPN14Q15678 1187 aa13.4□□□□□ -0.26
SEC61A1-202ENST00000424880 CREBRFQ8IUR6 639 aa13.4□□□□□ -0.26
SEC61A1-202ENST00000424880 RPAP2Q8IXW5 612 aaPredicted RBP13.4□□□□□ -0.26
SEC61A1-202ENST00000424880 C10orf67Q8IYJ2 551 aa13.4□□□□□ -0.26
SEC61A1-202ENST00000424880 RGS22Q8NE09 1264 aa13.4□□□□□ -0.26
SEC61A1-202ENST00000424880 NUP62CLQ9H1M0 184 aa13.4□□□□□ -0.26
SEC61A1-202ENST00000424880 TNMDQ9H2S6 317 aa13.4□□□□□ -0.26
SEC61A1-202ENST00000424880 FEZ2Q9UHY8 353 aaPredicted RBP13.4□□□□□ -0.26
SEC61A1-202ENST00000424880 PTCH1Q13635 1447 aa13.4□□□□□ -0.26
SEC61A1-202ENST00000424880 RTL1A6NKG5 1358 aa13.4□□□□□ -0.27
SEC61A1-202ENST00000424880 CASTP20810 708 aaKnown RBP13.39□□□□□ -0.27
SEC61A1-202ENST00000424880 MAP3K11Q16584 847 aa13.39□□□□□ -0.27
SEC61A1-202ENST00000424880 WAPLQ7Z5K2 1190 aa13.39□□□□□ -0.27
SEC61A1-202ENST00000424880 PPFIA3O75145 1194 aa13.39□□□□□ -0.27
SEC61A1-202ENST00000424880 ZNF75DP51815 510 aa13.39□□□□□ -0.27
SEC61A1-202ENST00000424880 ST5P78524 1137 aa13.39□□□□□ -0.27
SEC61A1-202ENST00000424880 CWC27Q6UX04 472 aaKnown RBP13.39□□□□□ -0.27
SEC61A1-202ENST00000424880 STRCQ7RTU9 1775 aa13.39□□□□□ -0.27
SEC61A1-202ENST00000424880 SKILP12757 684 aa13.39□□□□□ -0.27
SEC61A1-202ENST00000424880 RSPH14Q9UHP6 348 aa13.39□□□□□ -0.27
SEC61A1-202ENST00000424880 LCMT1Q9UIC8 334 aa13.39□□□□□ -0.27
SEC61A1-202ENST00000424880 PAXBP1Q9Y5B6 917 aa13.39□□□□□ -0.27
SEC61A1-202ENST00000424880 PIK3R4Q99570 1358 aa13.38□□□□□ -0.27
SEC61A1-202ENST00000424880 ZNF165P49910 485 aa13.38□□□□□ -0.27
SEC61A1-202ENST00000424880 BRPF1P55201 1214 aaPredicted RBP13.38□□□□□ -0.27
SEC61A1-202ENST00000424880 RRS1Q15050 365 aaKnown RBP13.38□□□□□ -0.27
SEC61A1-202ENST00000424880 PUS7Q96PZ0 661 aaKnown RBP13.38□□□□□ -0.27
SEC61A1-202ENST00000424880 FAM53CQ9NYF3 392 aa13.38□□□□□ -0.27
SEC61A1-202ENST00000424880 GOLGA6L4A6NEF3 574 aa13.38□□□□□ -0.27
SEC61A1-202ENST00000424880 SEC31AO94979 1220 aaKnown RBP13.38□□□□□ -0.27
SEC61A1-202ENST00000424880 FOSBP53539 338 aa13.38□□□□□ -0.27
SEC61A1-202ENST00000424880 ZNF428Q96B54 188 aa13.38□□□□□ -0.27
SEC61A1-202ENST00000424880 CABP1Q9NZU7 370 aa13.38□□□□□ -0.27
SEC61A1-202ENST00000424880 TPM3P06753 285 aa13.37□□□□□ -0.27
SEC61A1-202ENST00000424880 ADCK5Q3MIX3 580 aa13.37□□□□□ -0.27
SEC61A1-202ENST00000424880 MTMR6Q9Y217 621 aa13.37□□□□□ -0.27
SEC61A1-202ENST00000424880 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.37□□□□□ -0.27
SEC61A1-202ENST00000424880 CDC37L1Q7L3B6 337 aa13.37□□□□□ -0.27
SEC61A1-202ENST00000424880 KLHL34Q8N239 644 aa13.37□□□□□ -0.27
SEC61A1-202ENST00000424880 POLKQ9UBT6 870 aa13.37□□□□□ -0.27
SEC61A1-202ENST00000424880 SNX14Q9Y5W7 946 aa13.37□□□□□ -0.27
SEC61A1-202ENST00000424880 NR1I2O75469 434 aa13.37□□□□□ -0.27
SEC61A1-202ENST00000424880 TMEM87AQ8NBN3 555 aa13.37□□□□□ -0.27
SEC61A1-202ENST00000424880 DDX11Q96FC9 970 aa13.37□□□□□ -0.27
SEC61A1-202ENST00000424880 METP08581 1390 aa13.37□□□□□ -0.27
SEC61A1-202ENST00000424880 RGS12O14924 1447 aa13.36□□□□□ -0.27
SEC61A1-202ENST00000424880 SOX12O15370 315 aa13.36□□□□□ -0.27
SEC61A1-202ENST00000424880 STK3Q13188 491 aa13.36□□□□□ -0.27
SEC61A1-202ENST00000424880 LRRC8AQ8IWT6 810 aa13.36□□□□□ -0.27
SEC61A1-202ENST00000424880 RAD50Q92878 1312 aa13.36□□□□□ -0.27
SEC61A1-202ENST00000424880 SYT10Q6XYQ8 523 aa13.36□□□□□ -0.27
SEC61A1-202ENST00000424880 KRBA2Q6ZNG9 492 aa13.36□□□□□ -0.27
SEC61A1-202ENST00000424880 NFATC2IPQ8NCF5 419 aa13.36□□□□□ -0.27
SEC61A1-202ENST00000424880 CCDC34Q96HJ3 373 aa13.36□□□□□ -0.27
SEC61A1-202ENST00000424880 TOMM22Q9NS69 142 aa13.36□□□□□ -0.27
SEC61A1-202ENST00000424880 ERBB3P21860 1342 aa13.36□□□□□ -0.27
SEC61A1-202ENST00000424880 TNRQ92752 1358 aa13.36□□□□□ -0.27
SEC61A1-202ENST00000424880 LRRCC1Q9C099 1032 aa13.35□□□□□ -0.27
SEC61A1-202ENST00000424880 YY1AP1Q9H869 796 aa13.35□□□□□ -0.27
SEC61A1-202ENST00000424880 SETD1AO15047 1707 aaKnown RBP13.35□□□□□ -0.27
SEC61A1-202ENST00000424880 CYP2C19P33261 490 aa13.35□□□□□ -0.27
SEC61A1-202ENST00000424880 CLCN6P51797 869 aa13.35□□□□□ -0.27
SEC61A1-202ENST00000424880 PTPN21Q16825 1174 aa13.35□□□□□ -0.27
SEC61A1-202ENST00000424880 NRXN3Q9Y4C0 1643 aa13.35□□□□□ -0.27
SEC61A1-202ENST00000424880 ANKRD65E5RJM6 399 aa13.35□□□□□ -0.27
SEC61A1-202ENST00000424880 BICD2Q8TD16 824 aa13.35□□□□□ -0.27
SEC61A1-202ENST00000424880 CDK19Q9BWU1 502 aa13.35□□□□□ -0.27
SEC61A1-202ENST00000424880 LIMCH1Q9UPQ0 1083 aa13.35□□□□□ -0.27
SEC61A1-202ENST00000424880 IFIT2P09913 472 aaKnown RBP13.34□□□□□ -0.27
SEC61A1-202ENST00000424880 LARP1BQ659C4 914 aaKnown RBP13.34□□□□□ -0.27
SEC61A1-202ENST00000424880 FAM177A1Q8N128 213 aaPredicted RBP13.34□□□□□ -0.27
SEC61A1-202ENST00000424880 USP32Q8NFA0 1604 aa13.34□□□□□ -0.27
SEC61A1-202ENST00000424880 SKIDA1Q1XH10 827 aa13.34□□□□□ -0.27
SEC61A1-202ENST00000424880 ARHGAP29Q52LW3 1261 aa13.34□□□□□ -0.27
SEC61A1-202ENST00000424880 PLA2G4DQ86XP0 818 aa13.34□□□□□ -0.27
SEC61A1-202ENST00000424880 FHOD1Q9Y613 1164 aa13.34□□□□□ -0.27
SEC61A1-202ENST00000424880 CCDC69A6NI79 296 aa13.34□□□□□ -0.27
SEC61A1-202ENST00000424880 ZNF853P0CG23 659 aa13.34□□□□□ -0.27
SEC61A1-202ENST00000424880 HSPA4P34932 840 aa13.34□□□□□ -0.27
SEC61A1-202ENST00000424880 JAKMIP1Q96N16 626 aaKnown RBP13.34□□□□□ -0.27
SEC61A1-202ENST00000424880 CD163L1Q9NR16 1453 aa13.33□□□□□ -0.27
SEC61A1-202ENST00000424880 HMMRO75330 724 aa13.33□□□□□ -0.28
SEC61A1-202ENST00000424880 PLA2G4AP47712 749 aa13.33□□□□□ -0.28
SEC61A1-202ENST00000424880 C11orf57Q6ZUT1 292 aaPredicted RBP13.33□□□□□ -0.28
SEC61A1-202ENST00000424880 SMARCE1Q969G3 411 aa13.33□□□□□ -0.28
SEC61A1-202ENST00000424880 LRRC7Q96NW7 1537 aa13.33□□□□□ -0.28
SEC61A1-202ENST00000424880 SLU7O95391 586 aaKnown RBP13.33□□□□□ -0.28
SEC61A1-202ENST00000424880 PLPPR3Q6T4P5 718 aa13.33□□□□□ -0.28
SEC61A1-202ENST00000424880 ATP6V1DQ9Y5K8 247 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms