RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 CAMTA2O94983 1202 aa21.68■■□□□ 1.06
PUDP-203ENST00000424830 PRPF40BQ6NWY9 871 aaKnown RBP21.68■■□□□ 1.06
PUDP-203ENST00000424830 A1BGP04217 495 aa21.67■■□□□ 1.06
PUDP-203ENST00000424830 SRGNP10124 158 aa21.67■■□□□ 1.06
PUDP-203ENST00000424830 DZIP3Q86Y13 1208 aaKnown RBP21.67■■□□□ 1.06
PUDP-203ENST00000424830 MASTLQ96GX5 879 aa21.67■■□□□ 1.06
PUDP-203ENST00000424830 CREBZFQ9NS37 354 aa21.67■■□□□ 1.06
PUDP-203ENST00000424830 CEMIPQ8WUJ3 1361 aa21.66■■□□□ 1.06
PUDP-203ENST00000424830 BTBD11A6QL63 1104 aa21.66■■□□□ 1.06
PUDP-203ENST00000424830 NPC1L1Q9UHC9 1359 aa21.66■■□□□ 1.06
PUDP-203ENST00000424830 IQCA1LA6NCM1 817 aa21.65■■□□□ 1.06
PUDP-203ENST00000424830 DDNO94850 711 aaPredicted RBP21.65■■□□□ 1.06
PUDP-203ENST00000424830 CNGB1Q14028 1251 aaPredicted RBP21.64■■□□□ 1.05
PUDP-203ENST00000424830 NBPF5PQ86XG9 351 aaPredicted RBP21.64■■□□□ 1.05
PUDP-203ENST00000424830 ZNF652Q9Y2D9 606 aa21.64■■□□□ 1.05
PUDP-203ENST00000424830 MKRN1Q9UHC7 482 aaKnown RBP21.63■■□□□ 1.05
PUDP-203ENST00000424830 SCN4AP35499 1836 aa21.63■■□□□ 1.05
PUDP-203ENST00000424830 CLEC4GQ6UXB4 293 aa21.62■■□□□ 1.05
PUDP-203ENST00000424830 KCNQ3O43525 872 aa21.61■■□□□ 1.05
PUDP-203ENST00000424830 POTEIP0CG38 1075 aa21.61■■□□□ 1.05
PUDP-203ENST00000424830 POTEJP0CG39 1038 aa21.61■■□□□ 1.05
PUDP-203ENST00000424830 PRKAR2BP31323 418 aa21.61■■□□□ 1.05
PUDP-203ENST00000424830 CCDC93Q567U6 631 aa21.61■■□□□ 1.05
PUDP-203ENST00000424830 LDHDQ86WU2 507 aa21.6■■□□□ 1.05
PUDP-203ENST00000424830 CFAP53Q96M91 514 aa21.6■■□□□ 1.05
PUDP-203ENST00000424830 NPR1P16066 1061 aa21.59■■□□□ 1.05
PUDP-203ENST00000424830 PIP4K2AP48426 406 aaPredicted RBP21.59■■□□□ 1.05
PUDP-203ENST00000424830 L3MBTL3Q96JM7 780 aaPredicted RBP21.59■■□□□ 1.05
PUDP-203ENST00000424830 PHACTR3Q96KR7 559 aa21.59■■□□□ 1.05
PUDP-203ENST00000424830 USP16Q9Y5T5 823 aa21.59■■□□□ 1.05
PUDP-203ENST00000424830 SNRPA1P09661 255 aaKnown RBP21.58■■□□□ 1.05
PUDP-203ENST00000424830 RTF1Q92541 710 aaKnown RBP21.58■■□□□ 1.05
PUDP-203ENST00000424830 CNTNAP1P78357 1384 aa21.58■■□□□ 1.04
PUDP-203ENST00000424830 TPTE2Q6XPS3 522 aa21.57■■□□□ 1.04
PUDP-203ENST00000424830 C7orf43Q8WVR3 580 aa21.57■■□□□ 1.04
PUDP-203ENST00000424830 RSPH6AQ9H0K4 717 aa21.57■■□□□ 1.04
PUDP-203ENST00000424830 TAF1DQ9H5J8 278 aaPredicted RBP21.57■■□□□ 1.04
PUDP-203ENST00000424830 PASKQ96RG2 1323 aa21.57■■□□□ 1.04
PUDP-203ENST00000424830 FKBP4Q02790 459 aaKnown RBP eCLIP21.56■■□□□ 1.04
PUDP-203ENST00000424830 NIP7Q9Y221 180 aaKnown RBP eCLIP21.56■■□□□ 1.04
PUDP-203ENST00000424830 NUDCQ9Y266 331 aa21.56■■□□□ 1.04
PUDP-203ENST00000424830 PRAMEF22A3QJZ6 481 aa21.55■■□□□ 1.04
PUDP-203ENST00000424830 RGL2O15211 777 aa21.55■■□□□ 1.04
PUDP-203ENST00000424830 KLRG2A4D1S0 409 aaPredicted RBP21.55■■□□□ 1.04
PUDP-203ENST00000424830 RTKN2Q8IZC4 609 aa21.55■■□□□ 1.04
PUDP-203ENST00000424830 ZNF277Q9NRM2 450 aaPredicted RBP21.55■■□□□ 1.04
PUDP-203ENST00000424830 EAPPQ56P03 285 aaPredicted RBP21.54■■□□□ 1.04
PUDP-203ENST00000424830 MCM10Q7L590 875 aa21.54■■□□□ 1.04
PUDP-203ENST00000424830 AIDAQ96BJ3 306 aa21.54■■□□□ 1.04
PUDP-203ENST00000424830 HACL1Q9UJ83 578 aa21.54■■□□□ 1.04
PUDP-203ENST00000424830 ZNF541Q9H0D2 1346 aa21.53■■□□□ 1.04
PUDP-203ENST00000424830 TMEM88BA6NKF7 163 aa21.53■■□□□ 1.04
PUDP-203ENST00000424830 CLEC11AQ9Y240 323 aa21.53■■□□□ 1.04
PUDP-203ENST00000424830 FAM177BA6PVY3 158 aa21.52■■□□□ 1.03
PUDP-203ENST00000424830 U2AF1L5P0DN76 240 aaPredicted RBP21.52■■□□□ 1.03
PUDP-203ENST00000424830 GTF2E1P29083 439 aaPredicted RBP21.52■■□□□ 1.03
PUDP-203ENST00000424830 ALDH1B1P30837 517 aa21.52■■□□□ 1.03
PUDP-203ENST00000424830 U2AF1Q01081 240 aaKnown RBP eCLIP21.52■■□□□ 1.03
PUDP-203ENST00000424830 NBPF26B4DH59 902 aa21.51■■□□□ 1.03
PUDP-203ENST00000424830 FOXN1O15353 648 aa21.51■■□□□ 1.03
PUDP-203ENST00000424830 EPHX2P34913 555 aa21.51■■□□□ 1.03
PUDP-203ENST00000424830 NBPF10Q6P3W6 841 aaKnown RBP21.51■■□□□ 1.03
PUDP-203ENST00000424830 PNMA8AQ86V59 439 aaPredicted RBP21.51■■□□□ 1.03
PUDP-203ENST00000424830 NBPF15Q8N660 670 aa21.51■■□□□ 1.03
PUDP-203ENST00000424830 ITGBL1O95965 494 aaPredicted RBP21.5■■□□□ 1.03
PUDP-203ENST00000424830 IARSP41252 1262 aaKnown RBP21.5■■□□□ 1.03
PUDP-203ENST00000424830 OLFM4Q6UX06 510 aa21.5■■□□□ 1.03
PUDP-203ENST00000424830 PRDM10Q9NQV6 1147 aa21.5■■□□□ 1.03
PUDP-203ENST00000424830 LAMB4A4D0S4 1761 aa21.5■■□□□ 1.03
PUDP-203ENST00000424830 ADAMTSL1Q8N6G6 1762 aa21.49■■□□□ 1.03
PUDP-203ENST00000424830 CTCFP49711 727 aaPredicted RBP21.49■■□□□ 1.03
PUDP-203ENST00000424830 VEGFBP49765 207 aa21.49■■□□□ 1.03
PUDP-203ENST00000424830 RNF123Q5XPI4 1314 aa21.48■■□□□ 1.03
PUDP-203ENST00000424830 HTATSF1O43719 755 aaKnown RBP21.48■■□□□ 1.03
PUDP-203ENST00000424830 GPC2Q8N158 579 aa21.48■■□□□ 1.03
PUDP-203ENST00000424830 SYNE4Q8N205 404 aa21.48■■□□□ 1.03
PUDP-203ENST00000424830 JDP2Q8WYK2 163 aa21.48■■□□□ 1.03
PUDP-203ENST00000424830 FZD9O00144 591 aa21.47■■□□□ 1.03
PUDP-203ENST00000424830 DCTN1Q14203 1278 aa21.47■■□□□ 1.03
PUDP-203ENST00000424830 HLFQ16534 295 aa21.47■■□□□ 1.03
PUDP-203ENST00000424830 NYXQ9GZU5 481 aa21.47■■□□□ 1.03
PUDP-203ENST00000424830 TAF7Q15545 349 aaPredicted RBP21.46■■□□□ 1.03
PUDP-203ENST00000424830 CNTROBQ8N137 903 aa21.45■■□□□ 1.02
PUDP-203ENST00000424830 PSMD1Q99460 953 aa21.45■■□□□ 1.02
PUDP-203ENST00000424830 ZEB1P37275 1124 aaPredicted RBP21.44■■□□□ 1.02
PUDP-203ENST00000424830 CRY2Q49AN0 593 aa21.44■■□□□ 1.02
PUDP-203ENST00000424830 MAP1SQ66K74 1059 aaPredicted RBP21.44■■□□□ 1.02
PUDP-203ENST00000424830 CC2D2BQ6DHV5 1058 aa21.44■■□□□ 1.02
PUDP-203ENST00000424830 RASSF10A6NK89 507 aa21.43■■□□□ 1.02
PUDP-203ENST00000424830 PPP2R1AP30153 589 aa21.43■■□□□ 1.02
PUDP-203ENST00000424830 EIF6P56537 245 aaKnown RBP21.43■■□□□ 1.02
PUDP-203ENST00000424830 DEFB115Q30KQ5 88 aa21.43■■□□□ 1.02
PUDP-203ENST00000424830 RPGRQ92834 1020 aaKnown RBP21.43■■□□□ 1.02
PUDP-203ENST00000424830 WBP1LQ9NX94 342 aa21.43■■□□□ 1.02
PUDP-203ENST00000424830 NUP98P52948 1817 aa21.43■■□□□ 1.02
PUDP-203ENST00000424830 ABCC12Q96J65 1359 aa21.42■■□□□ 1.02
PUDP-203ENST00000424830 ERVV-1B6SEH8 477 aa21.42■■□□□ 1.02
PUDP-203ENST00000424830 NEFMP07197 916 aa21.42■■□□□ 1.02
PUDP-203ENST00000424830 LMOD1P29536 600 aaPredicted RBP21.42■■□□□ 1.02
PUDP-203ENST00000424830 KIF6Q6ZMV9 814 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms