RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 SEC24BO95487 1268 aa17.75■□□□□ 0.43
LINC00839-201ENST00000424751 BARGINQ6ZT62 677 aa17.75■□□□□ 0.43
LINC00839-201ENST00000424751 ATP5J2-PTCD1G3V325 749 aa17.74■□□□□ 0.43
LINC00839-201ENST00000424751 KSR2Q6VAB6 950 aa17.74■□□□□ 0.43
LINC00839-201ENST00000424751 SMIM5Q71RC9 77 aa17.74■□□□□ 0.43
LINC00839-201ENST00000424751 C16orf71Q8IYS4 520 aaPredicted RBP17.74■□□□□ 0.43
LINC00839-201ENST00000424751 ANKRD44Q8N8A2 993 aa17.74■□□□□ 0.43
LINC00839-201ENST00000424751 HYPKQ9NX55 129 aa17.74■□□□□ 0.43
LINC00839-201ENST00000424751 THRAP3Q9Y2W1 955 aaKnown RBP17.74■□□□□ 0.43
LINC00839-201ENST00000424751 OTUD7AQ8TE49 926 aaPredicted RBP17.74■□□□□ 0.43
LINC00839-201ENST00000424751 SRCIN1Q9C0H9 1055 aa17.74■□□□□ 0.43
LINC00839-201ENST00000424751 ARFGEF2Q9Y6D5 1785 aa17.73■□□□□ 0.43
LINC00839-201ENST00000424751 SLKQ9H2G2 1235 aaPredicted RBP17.73■□□□□ 0.43
LINC00839-201ENST00000424751 ANKRD45Q5TZF3 282 aa17.73■□□□□ 0.43
LINC00839-201ENST00000424751 MYD88Q99836 296 aa17.73■□□□□ 0.43
LINC00839-201ENST00000424751 ANTXR1Q9H6X2 564 aa17.73■□□□□ 0.43
LINC00839-201ENST00000424751 RIC3Q7Z5B4 369 aa17.72■□□□□ 0.43
LINC00839-201ENST00000424751 TBC1D32Q96NH3 1257 aa17.72■□□□□ 0.43
LINC00839-201ENST00000424751 ZBTB3Q9H5J0 574 aa17.72■□□□□ 0.43
LINC00839-201ENST00000424751 TJP1Q07157 1748 aa17.71■□□□□ 0.43
LINC00839-201ENST00000424751 EXOC6BQ9Y2D4 811 aa17.71■□□□□ 0.43
LINC00839-201ENST00000424751 PXDNLA1KZ92 1463 aa17.71■□□□□ 0.43
LINC00839-201ENST00000424751 AFDNP55196 1824 aaKnown RBP17.71■□□□□ 0.42
LINC00839-201ENST00000424751 NUCB1Q02818 461 aa17.7■□□□□ 0.42
LINC00839-201ENST00000424751 KAZALD1Q96I82 304 aa17.7■□□□□ 0.42
LINC00839-201ENST00000424751 GNAI2P04899 355 aa17.7■□□□□ 0.42
LINC00839-201ENST00000424751 ANKRD13DQ6ZTN6 518 aa17.69■□□□□ 0.42
LINC00839-201ENST00000424751 MYH14Q7Z406 1995 aaKnown RBP17.69■□□□□ 0.42
LINC00839-201ENST00000424751 ITPK1Q13572 414 aa17.69■□□□□ 0.42
LINC00839-201ENST00000424751 EPHA10Q5JZY3 1008 aa17.69■□□□□ 0.42
LINC00839-201ENST00000424751 GJD4Q96KN9 370 aaPredicted RBP17.69■□□□□ 0.42
LINC00839-201ENST00000424751 ZBTB1Q9Y2K1 713 aa17.69■□□□□ 0.42
LINC00839-201ENST00000424751 NUP188Q5SRE5 1749 aa17.68■□□□□ 0.42
LINC00839-201ENST00000424751 UBTFL1P0CB47 393 aaPredicted RBP17.68■□□□□ 0.42
LINC00839-201ENST00000424751 CHD1LQ86WJ1 897 aa17.68■□□□□ 0.42
LINC00839-201ENST00000424751 THSD7AQ9UPZ6 1657 aa17.68■□□□□ 0.42
LINC00839-201ENST00000424751 SUCLG2Q96I99 432 aa17.68■□□□□ 0.42
LINC00839-201ENST00000424751 ARXQ96QS3 562 aa17.68■□□□□ 0.42
LINC00839-201ENST00000424751 CDCA7Q9BWT1 371 aaPredicted RBP17.68■□□□□ 0.42
LINC00839-201ENST00000424751 DCTPP1Q9H773 170 aa17.68■□□□□ 0.42
LINC00839-201ENST00000424751 NEURL1BA8MQ27 555 aa17.67■□□□□ 0.42
LINC00839-201ENST00000424751 CYP19A1P11511 503 aaPredicted RBP17.67■□□□□ 0.42
LINC00839-201ENST00000424751 TBC1D2Q9BYX2 928 aa17.67■□□□□ 0.42
LINC00839-201ENST00000424751 TSHZ3Q63HK5 1081 aa17.66■□□□□ 0.42
LINC00839-201ENST00000424751 PPP1R42Q7Z4L9 355 aa17.66■□□□□ 0.42
LINC00839-201ENST00000424751 METTL22Q9BUU2 404 aaPredicted RBP17.66■□□□□ 0.42
LINC00839-201ENST00000424751 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.66■□□□□ 0.42
LINC00839-201ENST00000424751 GNAI3P08754 354 aa17.65■□□□□ 0.42
LINC00839-201ENST00000424751 ATP8B2P98198 1209 aa17.65■□□□□ 0.42
LINC00839-201ENST00000424751 HLFQ16534 295 aa17.65■□□□□ 0.42
LINC00839-201ENST00000424751 RPAP2Q8IXW5 612 aaPredicted RBP17.65■□□□□ 0.42
LINC00839-201ENST00000424751 KLHDC4Q8TBB5 520 aa17.65■□□□□ 0.42
LINC00839-201ENST00000424751 QTRT2Q9H974 415 aaKnown RBP17.65■□□□□ 0.42
LINC00839-201ENST00000424751 C9orf78Q9NZ63 289 aaPredicted RBP17.65■□□□□ 0.42
LINC00839-201ENST00000424751 PA2G4Q9UQ80 394 aaKnown RBP17.65■□□□□ 0.42
LINC00839-201ENST00000424751 SYNE4Q8N205 404 aa17.64■□□□□ 0.41
LINC00839-201ENST00000424751 LINS1Q8NG48 757 aa17.64■□□□□ 0.41
LINC00839-201ENST00000424751 BRWD3Q6RI45 1802 aa17.64■□□□□ 0.41
LINC00839-201ENST00000424751 GOLGA6L3A6NEY3 463 aa17.64■□□□□ 0.41
LINC00839-201ENST00000424751 ATRNO75882 1429 aa17.64■□□□□ 0.41
LINC00839-201ENST00000424751 DDX58O95786 925 aaKnown RBP17.63■□□□□ 0.41
LINC00839-201ENST00000424751 GCKRQ14397 625 aa17.63■□□□□ 0.41
LINC00839-201ENST00000424751 SEPT12Q8IYM1 358 aa17.63■□□□□ 0.41
LINC00839-201ENST00000424751 BICC1Q9H694 974 aaKnown RBP17.63■□□□□ 0.41
LINC00839-201ENST00000424751 GRM8O00222 908 aa17.63■□□□□ 0.41
LINC00839-201ENST00000424751 ATP6V1AP38606 617 aa17.63■□□□□ 0.41
LINC00839-201ENST00000424751 TBC1D2BQ9UPU7 963 aa17.63■□□□□ 0.41
LINC00839-201ENST00000424751 BTAF1O14981 1849 aa17.62■□□□□ 0.41
LINC00839-201ENST00000424751 PALLDQ8WX93 1383 aa17.62■□□□□ 0.41
LINC00839-201ENST00000424751 LOC102724428A0A0B4J2F2 783 aa17.62■□□□□ 0.41
LINC00839-201ENST00000424751 SIK1P57059 783 aa17.62■□□□□ 0.41
LINC00839-201ENST00000424751 PLBD2Q8NHP8 589 aa17.62■□□□□ 0.41
LINC00839-201ENST00000424751 GCC1Q96CN9 775 aa17.62■□□□□ 0.41
LINC00839-201ENST00000424751 CHMP4BQ9H444 224 aaKnown RBP17.62■□□□□ 0.41
LINC00839-201ENST00000424751 SRGAP3O43295 1099 aa17.61■□□□□ 0.41
LINC00839-201ENST00000424751 INTS5Q6P9B9 1019 aaKnown RBP17.61■□□□□ 0.41
LINC00839-201ENST00000424751 UBE3BQ7Z3V4 1068 aa17.61■□□□□ 0.41
LINC00839-201ENST00000424751 AMIGO3Q86WK7 504 aa17.61■□□□□ 0.41
LINC00839-201ENST00000424751 IL1RAPL2Q9NP60 686 aa17.61■□□□□ 0.41
LINC00839-201ENST00000424751 SBF2Q86WG5 1849 aa17.61■□□□□ 0.41
LINC00839-201ENST00000424751 ALDH1L1O75891 902 aa17.6■□□□□ 0.41
LINC00839-201ENST00000424751 MCM4P33991 863 aa17.6■□□□□ 0.41
LINC00839-201ENST00000424751 RRAGDQ9NQL2 400 aaPredicted RBP17.6■□□□□ 0.41
LINC00839-201ENST00000424751 FSD2A1L4K1 749 aa17.6■□□□□ 0.41
LINC00839-201ENST00000424751 GPTP24298 496 aa17.6■□□□□ 0.41
LINC00839-201ENST00000424751 VSIG10Q8N0Z9 540 aa17.6■□□□□ 0.41
LINC00839-201ENST00000424751 CHMP5Q9NZZ3 219 aa17.6■□□□□ 0.41
LINC00839-201ENST00000424751 CRKLP46109 303 aaKnown RBP17.59■□□□□ 0.41
LINC00839-201ENST00000424751 LINC00116Q8NCU8 138 aa17.59■□□□□ 0.41
LINC00839-201ENST00000424751 SSH3Q8TE77 659 aa17.59■□□□□ 0.41
LINC00839-201ENST00000424751 CASP7P55210 303 aa17.59■□□□□ 0.41
LINC00839-201ENST00000424751 POLA2Q14181 598 aa17.59■□□□□ 0.41
LINC00839-201ENST00000424751 PLEKHM2Q8IWE5 1019 aa17.59■□□□□ 0.41
LINC00839-201ENST00000424751 TRPC5Q9UL62 973 aaPredicted RBP17.59■□□□□ 0.41
LINC00839-201ENST00000424751 A0A087WZG4 1122 aa17.58■□□□□ 0.4
LINC00839-201ENST00000424751 XRCC6P12956 609 aaKnown RBP eCLIP17.58■□□□□ 0.4
LINC00839-201ENST00000424751 CHMP4AQ9BY43 222 aa17.58■□□□□ 0.4
LINC00839-201ENST00000424751 STARD3NLO95772 234 aa17.58■□□□□ 0.4
LINC00839-201ENST00000424751 GSPT1P15170 499 aaKnown RBP17.58■□□□□ 0.4
LINC00839-201ENST00000424751 NUP98P52948 1817 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms