RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 NOS2P35228 1153 aa5.74□□□□□ -1.49
SF3B1-205ENST00000424674 SNRPNP63162 240 aaKnown RBP5.74□□□□□ -1.49
SF3B1-205ENST00000424674 GPAT2Q6NUI2 795 aa5.74□□□□□ -1.49
SF3B1-205ENST00000424674 SIX5Q8N196 739 aa5.74□□□□□ -1.49
SF3B1-205ENST00000424674 ZNF594Q96JF6 807 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-205ENST00000424674 RRAGCQ9HB90 399 aa5.74□□□□□ -1.49
SF3B1-205ENST00000424674 MKL2Q9ULH7 1088 aa5.74□□□□□ -1.49
SF3B1-205ENST00000424674 RBM19Q9Y4C8 960 aaKnown RBP5.74□□□□□ -1.49
SF3B1-205ENST00000424674 GPC6Q9Y625 555 aaPredicted RBP5.74□□□□□ -1.49
SF3B1-205ENST00000424674 SERTM1A2A2V5 107 aa5.73□□□□□ -1.49
SF3B1-205ENST00000424674 NEURL1BA8MQ27 555 aa5.73□□□□□ -1.49
SF3B1-205ENST00000424674 EML1O00423 815 aa5.73□□□□□ -1.49
SF3B1-205ENST00000424674 EPXP11678 715 aa5.73□□□□□ -1.49
SF3B1-205ENST00000424674 ADH6P28332 368 aa5.73□□□□□ -1.49
SF3B1-205ENST00000424674 PSMA6P60900 246 aaKnown RBP5.73□□□□□ -1.49
SF3B1-205ENST00000424674 RGS22Q8NE09 1264 aa5.73□□□□□ -1.49
SF3B1-205ENST00000424674 DCAF5Q96JK2 942 aa5.73□□□□□ -1.49
SF3B1-205ENST00000424674 TSPAN10Q9H1Z9 355 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-205ENST00000424674 AVENQ9NQS1 362 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-205ENST00000424674 HCN2Q9UL51 889 aa5.73□□□□□ -1.49
SF3B1-205ENST00000424674 CHMP3Q9Y3E7 222 aa5.73□□□□□ -1.49
SF3B1-205ENST00000424674 MAFBQ9Y5Q3 323 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-205ENST00000424674 A6NJR5 290 aa5.72□□□□□ -1.49
SF3B1-205ENST00000424674 EFSO43281 561 aa5.72□□□□□ -1.49
SF3B1-205ENST00000424674 IGHA1P01876 353 aa5.72□□□□□ -1.49
SF3B1-205ENST00000424674 LAMC2Q13753 1193 aa5.72□□□□□ -1.49
SF3B1-205ENST00000424674 SH3PXD2AQ5TCZ1 1133 aa5.72□□□□□ -1.49
SF3B1-205ENST00000424674 TMCO4Q5TGY1 634 aa5.72□□□□□ -1.49
SF3B1-205ENST00000424674 RHPN1Q8TCX5 695 aa5.72□□□□□ -1.49
SF3B1-205ENST00000424674 MARK1Q9P0L2 795 aa5.72□□□□□ -1.49
SF3B1-205ENST00000424674 SFI1A8K8P3 1242 aa5.71□□□□□ -1.5
SF3B1-205ENST00000424674 HIRAP54198 1017 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-205ENST00000424674 PLA2G4EQ3MJ16 856 aa5.71□□□□□ -1.5
SF3B1-205ENST00000424674 LRRC69Q6ZNQ3 347 aa5.71□□□□□ -1.5
SF3B1-205ENST00000424674 TSEN2Q8NCE0 465 aaKnown RBP5.71□□□□□ -1.5
SF3B1-205ENST00000424674 CALR3Q96L12 384 aaKnown RBP5.71□□□□□ -1.5
SF3B1-205ENST00000424674 NEUROD4Q9HD90 331 aa5.71□□□□□ -1.5
SF3B1-205ENST00000424674 TFIP11Q9UBB9 837 aaKnown RBP5.71□□□□□ -1.5
SF3B1-205ENST00000424674 PIK3R2O00459 728 aa5.7□□□□□ -1.5
SF3B1-205ENST00000424674 DKK1O94907 266 aa5.7□□□□□ -1.5
SF3B1-205ENST00000424674 HOXB4P17483 251 aaPredicted RBP5.7□□□□□ -1.5
SF3B1-205ENST00000424674 RASA1P20936 1047 aa5.7□□□□□ -1.5
SF3B1-205ENST00000424674 ZNF468Q5VIY5 522 aaPredicted RBP5.7□□□□□ -1.5
SF3B1-205ENST00000424674 POTEAQ6S8J7 498 aa5.7□□□□□ -1.5
SF3B1-205ENST00000424674 FCHSD1Q86WN1 690 aa5.7□□□□□ -1.5
SF3B1-205ENST00000424674 CCDC82Q8N4S0 544 aa5.7□□□□□ -1.5
SF3B1-205ENST00000424674 STRN4Q9NRL3 753 aa5.7□□□□□ -1.5
SF3B1-205ENST00000424674 PRR12Q9ULL5 1215 aa5.7□□□□□ -1.5
SF3B1-205ENST00000424674 GNB5O14775 395 aa5.69□□□□□ -1.5
SF3B1-205ENST00000424674 PPP1R12BO60237 982 aaPredicted RBP5.69□□□□□ -1.5
SF3B1-205ENST00000424674 DGKGP49619 791 aa5.69□□□□□ -1.5
SF3B1-205ENST00000424674 SEC13P55735 322 aa5.69□□□□□ -1.5
SF3B1-205ENST00000424674 PCBP4P57723 403 aaKnown RBP5.69□□□□□ -1.5
SF3B1-205ENST00000424674 C1orf53Q5VUE5 145 aa5.69□□□□□ -1.5
SF3B1-205ENST00000424674 LARP1Q6PKG0 1096 aaKnown RBP5.69□□□□□ -1.5
SF3B1-205ENST00000424674 CHSY3Q70JA7 882 aa5.69□□□□□ -1.5
SF3B1-205ENST00000424674 ALYREFQ86V81 257 aaKnown RBP5.69□□□□□ -1.5
SF3B1-205ENST00000424674 BTBD6Q96KE9 485 aa5.69□□□□□ -1.5
SF3B1-205ENST00000424674 PPP1R12CQ9BZL4 782 aa5.69□□□□□ -1.5
SF3B1-205ENST00000424674 PHACTR1Q9C0D0 580 aa5.69□□□□□ -1.5
SF3B1-205ENST00000424674 KLF15Q9UIH9 416 aa5.69□□□□□ -1.5
SF3B1-205ENST00000424674 RBM25P49756 843 aaKnown RBP5.68□□□□□ -1.5
SF3B1-205ENST00000424674 GRIN2CQ14957 1233 aa5.68□□□□□ -1.5
SF3B1-205ENST00000424674 LINC00114Q6XXX2 140 aa5.68□□□□□ -1.5
SF3B1-205ENST00000424674 C7orf43Q8WVR3 580 aa5.68□□□□□ -1.5
SF3B1-205ENST00000424674 HSH2DQ96JZ2 352 aa5.68□□□□□ -1.5
SF3B1-205ENST00000424674 MTMR7Q9Y216 660 aa5.68□□□□□ -1.5
SF3B1-205ENST00000424674 HCN4Q9Y3Q4 1203 aa5.68□□□□□ -1.5
SF3B1-205ENST00000424674 USP17L15C9J2P7 530 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 USP17L10C9JJH3 530 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 USP17L13C9JLJ4 530 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 USP17L12C9JPN9 530 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 USP17L11C9JVI0 530 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 USP17L21D6R901 530 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 USP17L18D6R9N7 530 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 USP17L22D6RA61 530 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 USP17L17D6RBQ6 530 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 USP17L19D6RCP7 530 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 USP17L20D6RJB6 530 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 MSTNO14793 375 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 C21orf2O43822 256 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 ITGB2P05107 769 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 COL8A1P27658 744 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 USP17L24Q0WX57 530 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 SUZ12Q15022 739 aaKnown RBP5.67□□□□□ -1.5
SF3B1-205ENST00000424674 CRTC2Q53ET0 693 aaPredicted RBP5.67□□□□□ -1.5
SF3B1-205ENST00000424674 STAG2Q8N3U4 1231 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 GAS2L2Q8NHY3 880 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 ANKIB1Q9P2G1 1089 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 ATAD2Q6PL18 1390 aa5.67□□□□□ -1.5
SF3B1-205ENST00000424674 FAM196BA6NMK8 535 aa5.66□□□□□ -1.5
SF3B1-205ENST00000424674 E9PSI1 815 aa5.66□□□□□ -1.5
SF3B1-205ENST00000424674 MFAP1P55081 439 aaKnown RBP5.66□□□□□ -1.5
SF3B1-205ENST00000424674 TYRO3Q06418 890 aa5.66□□□□□ -1.5
SF3B1-205ENST00000424674 SFSWAPQ12872 951 aaKnown RBP5.66□□□□□ -1.5
SF3B1-205ENST00000424674 DPYDQ12882 1025 aa5.66□□□□□ -1.5
SF3B1-205ENST00000424674 PTK7Q13308 1070 aa5.66□□□□□ -1.5
SF3B1-205ENST00000424674 HIF1AQ16665 826 aa5.66□□□□□ -1.5
SF3B1-205ENST00000424674 CDCA8Q53HL2 280 aa5.66□□□□□ -1.5
SF3B1-205ENST00000424674 SYT9Q86SS6 491 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms