RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 CCDC83Q8IWF9 413 aa16.12■□□□□ 0.17
SREBF2-202ENST00000424354 GLRX3O76003 335 aaKnown RBP16.12■□□□□ 0.17
SREBF2-202ENST00000424354 BCORL1Q5H9F3 1711 aa16.12■□□□□ 0.17
SREBF2-202ENST00000424354 KIF1BPQ96EK5 621 aa16.12■□□□□ 0.17
SREBF2-202ENST00000424354 ZFYVE9O95405 1425 aa16.12■□□□□ 0.17
SREBF2-202ENST00000424354 FAM177BA6PVY3 158 aa16.12■□□□□ 0.17
SREBF2-202ENST00000424354 DDX19AQ9NUU7 478 aaKnown RBP16.12■□□□□ 0.17
SREBF2-202ENST00000424354 IL1RAPL2Q9NP60 686 aa16.11■□□□□ 0.17
SREBF2-202ENST00000424354 BMP2KQ9NSY1 1161 aaPredicted RBP16.11■□□□□ 0.17
SREBF2-202ENST00000424354 HSPA2P54652 639 aa16.11■□□□□ 0.17
SREBF2-202ENST00000424354 URI1O94763 535 aaPredicted RBP16.11■□□□□ 0.17
SREBF2-202ENST00000424354 SOGA3Q5TF21 947 aa16.11■□□□□ 0.17
SREBF2-202ENST00000424354 CDK19Q9BWU1 502 aa16.11■□□□□ 0.17
SREBF2-202ENST00000424354 JAKMIP3Q5VZ66 844 aa16.11■□□□□ 0.17
SREBF2-202ENST00000424354 USP25Q9UHP3 1055 aa16.11■□□□□ 0.17
SREBF2-202ENST00000424354 NPHP3Q7Z494 1330 aa16.11■□□□□ 0.17
SREBF2-202ENST00000424354 KLHL40Q2TBA0 621 aa16.1■□□□□ 0.17
SREBF2-202ENST00000424354 NUP133Q8WUM0 1156 aa16.1■□□□□ 0.17
SREBF2-202ENST00000424354 ADGRF5Q8IZF2 1346 aa16.1■□□□□ 0.17
SREBF2-202ENST00000424354 C20orf194Q5TEA3 1177 aa16.1■□□□□ 0.17
SREBF2-202ENST00000424354 TOP1P11387 765 aaKnown RBP16.1■□□□□ 0.17
SREBF2-202ENST00000424354 EZRP15311 586 aaKnown RBP16.1■□□□□ 0.17
SREBF2-202ENST00000424354 UBE2Q2Q8WVN8 375 aa16.1■□□□□ 0.17
SREBF2-202ENST00000424354 CNKSR2Q8WXI2 1034 aa16.1■□□□□ 0.17
SREBF2-202ENST00000424354 KCNH5Q8NCM2 988 aa16.09■□□□□ 0.17
SREBF2-202ENST00000424354 CABP1Q9NZU7 370 aa16.09■□□□□ 0.17
SREBF2-202ENST00000424354 MYOM2P54296 1465 aa16.09■□□□□ 0.17
SREBF2-202ENST00000424354 CLCN1P35523 988 aa16.09■□□□□ 0.17
SREBF2-202ENST00000424354 FERMT3Q86UX7 667 aa16.09■□□□□ 0.17
SREBF2-202ENST00000424354 KRI1Q8N9T8 703 aaKnown RBP16.09■□□□□ 0.17
SREBF2-202ENST00000424354 UBAC1Q9BSL1 405 aa16.09■□□□□ 0.17
SREBF2-202ENST00000424354 NSD3Q9BZ95 1437 aa16.09■□□□□ 0.17
SREBF2-202ENST00000424354 SPA17Q15506 151 aa16.09■□□□□ 0.17
SREBF2-202ENST00000424354 LIMCH1Q9UPQ0 1083 aa16.09■□□□□ 0.17
SREBF2-202ENST00000424354 CAVIN2O95810 425 aa16.08■□□□□ 0.17
SREBF2-202ENST00000424354 MICALCLQ6ZW33 695 aa16.08■□□□□ 0.17
SREBF2-202ENST00000424354 DDX11Q96FC9 970 aa16.08■□□□□ 0.17
SREBF2-202ENST00000424354 KIF4BQ2VIQ3 1234 aa16.08■□□□□ 0.17
SREBF2-202ENST00000424354 DIP2AQ14689 1571 aa16.08■□□□□ 0.16
SREBF2-202ENST00000424354 PPP4R3BQ5MIZ7 849 aa16.08■□□□□ 0.16
SREBF2-202ENST00000424354 MADDQ8WXG6 1647 aa16.08■□□□□ 0.16
SREBF2-202ENST00000424354 TATP17735 454 aaPredicted RBP16.08■□□□□ 0.16
SREBF2-202ENST00000424354 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
SREBF2-202ENST00000424354 GOLGA6L9A6NEM1 432 aa16.08■□□□□ 0.16
SREBF2-202ENST00000424354 TBC1D32Q96NH3 1257 aa16.08■□□□□ 0.16
SREBF2-202ENST00000424354 PAXBP1Q9Y5B6 917 aa16.08■□□□□ 0.16
SREBF2-202ENST00000424354 TOM1L2Q6ZVM7 507 aa16.07■□□□□ 0.16
SREBF2-202ENST00000424354 ANKRD62A6NC57 917 aa16.07■□□□□ 0.16
SREBF2-202ENST00000424354 HMGB1P09429 215 aaKnown RBP16.07■□□□□ 0.16
SREBF2-202ENST00000424354 PRPF40BQ6NWY9 871 aaKnown RBP16.07■□□□□ 0.16
SREBF2-202ENST00000424354 EXOC6BQ9Y2D4 811 aa16.07■□□□□ 0.16
SREBF2-202ENST00000424354 BAG4O95429 457 aaKnown RBP16.07■□□□□ 0.16
SREBF2-202ENST00000424354 NUTM1Q86Y26 1132 aa16.07■□□□□ 0.16
SREBF2-202ENST00000424354 GBP2P32456 591 aaPredicted RBP16.07■□□□□ 0.16
SREBF2-202ENST00000424354 SSH1Q8WYL5 1049 aa16.07■□□□□ 0.16
SREBF2-202ENST00000424354 CEP170BQ9Y4F5 1589 aaPredicted RBP16.07■□□□□ 0.16
SREBF2-202ENST00000424354 ADCY5O95622 1261 aa16.06■□□□□ 0.16
SREBF2-202ENST00000424354 FKBP4Q02790 459 aaKnown RBP eCLIP16.06■□□□□ 0.163e-6■■■□□ 15
SREBF2-202ENST00000424354 BMP2KLQ5H9B9 411 aa16.06■□□□□ 0.16
SREBF2-202ENST00000424354 C16orf45Q96MC5 204 aaPredicted RBP16.06■□□□□ 0.16
SREBF2-202ENST00000424354 CEP126Q9P2H0 1117 aa16.06■□□□□ 0.16
SREBF2-202ENST00000424354 ZNF530Q6P9A1 599 aaPredicted RBP16.06■□□□□ 0.16
SREBF2-202ENST00000424354 ZHX3Q9H4I2 956 aa16.06■□□□□ 0.16
SREBF2-202ENST00000424354 FRMPD1Q5SYB0 1578 aa16.06■□□□□ 0.16
SREBF2-202ENST00000424354 BMS1Q14692 1282 aaKnown RBP16.06■□□□□ 0.16
SREBF2-202ENST00000424354 COL17A1Q9UMD9 1497 aaPredicted RBP16.06■□□□□ 0.16
SREBF2-202ENST00000424354 SYNMO15061 1565 aa16.05■□□□□ 0.16
SREBF2-202ENST00000424354 NCOA3Q9Y6Q9 1424 aa16.05■□□□□ 0.16
SREBF2-202ENST00000424354 CCDC61Q9Y6R9 512 aa16.05■□□□□ 0.16
SREBF2-202ENST00000424354 SPATA31D1Q6ZQQ2 1576 aa16.05■□□□□ 0.16
SREBF2-202ENST00000424354 STX1AQ16623 288 aa16.05■□□□□ 0.16
SREBF2-202ENST00000424354 PHF8Q9UPP1 1060 aa16.05■□□□□ 0.16
SREBF2-202ENST00000424354 PHAXQ9H814 394 aaKnown RBP16.05■□□□□ 0.16
SREBF2-202ENST00000424354 TDO2P48775 406 aa16.04■□□□□ 0.16
SREBF2-202ENST00000424354 WASLO00401 505 aaPredicted RBP16.04■□□□□ 0.16
SREBF2-202ENST00000424354 STK11IPQ8N1F8 1099 aa16.04■□□□□ 0.16
SREBF2-202ENST00000424354 FKBP15Q5T1M5 1219 aa16.04■□□□□ 0.16
SREBF2-202ENST00000424354 POLR3GO15318 223 aaPredicted RBP16.03■□□□□ 0.16
SREBF2-202ENST00000424354 UBE2HP62256 183 aa16.03■□□□□ 0.16
SREBF2-202ENST00000424354 DDX54Q8TDD1 881 aaKnown RBP16.03■□□□□ 0.16
SREBF2-202ENST00000424354 SPHKAPQ2M3C7 1700 aa16.03■□□□□ 0.16
SREBF2-202ENST00000424354 LRRC59Q96AG4 307 aaKnown RBP16.03■□□□□ 0.16
SREBF2-202ENST00000424354 PPRC1Q5VV67 1664 aaKnown RBP16.03■□□□□ 0.16
SREBF2-202ENST00000424354 CCDC171Q6TFL3 1326 aa16.03■□□□□ 0.16
SREBF2-202ENST00000424354 MAP2K1Q02750 393 aaPredicted RBP16.03■□□□□ 0.16
SREBF2-202ENST00000424354 TMEM132AQ24JP5 1023 aa16.03■□□□□ 0.16
SREBF2-202ENST00000424354 LRSAM1Q6UWE0 723 aa16.03■□□□□ 0.16
SREBF2-202ENST00000424354 SPG7Q9UQ90 795 aa16.03■□□□□ 0.16
SREBF2-202ENST00000424354 CABP4P57796 275 aa16.02■□□□□ 0.16
SREBF2-202ENST00000424354 SNW1Q13573 536 aaKnown RBP16.02■□□□□ 0.16
SREBF2-202ENST00000424354 ZSCAN23Q3MJ62 389 aa16.02■□□□□ 0.16
SREBF2-202ENST00000424354 CCDC150Q8NCX0 1101 aa16.02■□□□□ 0.16
SREBF2-202ENST00000424354 C8orf76Q96K31 380 aa16.02■□□□□ 0.16
SREBF2-202ENST00000424354 SMARCA5O60264 1052 aaPredicted RBP16.02■□□□□ 0.16
SREBF2-202ENST00000424354 SEPT11Q9NVA2 429 aaKnown RBP16.02■□□□□ 0.16
SREBF2-202ENST00000424354 GTF2F1P35269 517 aaKnown RBP eCLIP16.02■□□□□ 0.152e-24■■■□□ 16.1
SREBF2-202ENST00000424354 DYDC1Q8WWB3 177 aa16.02■□□□□ 0.15
SREBF2-202ENST00000424354 PAFAH1B1P43034 410 aa16.02■□□□□ 0.15
SREBF2-202ENST00000424354 DUSP27Q5VZP5 1158 aa16.02■□□□□ 0.15
SREBF2-202ENST00000424354 WWC2Q6AWC2 1192 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms