RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 ACRBPQ8NEB7 543 aa8□□□□□ -1.13
CNOT4-205ENST00000423368 KNSTRNQ9Y448 316 aa8□□□□□ -1.13
CNOT4-205ENST00000423368 FMNL2Q96PY5 1086 aa7.99□□□□□ -1.13
CNOT4-205ENST00000423368 DNAJC25Q9H1X3 360 aa7.99□□□□□ -1.13
CNOT4-205ENST00000423368 ARFGAP3Q9NP61 516 aa7.99□□□□□ -1.13
CNOT4-205ENST00000423368 CCDC69A6NI79 296 aa7.99□□□□□ -1.13
CNOT4-205ENST00000423368 RAD21O60216 631 aa7.99□□□□□ -1.13
CNOT4-205ENST00000423368 PDE4DQ08499 809 aa7.99□□□□□ -1.13
CNOT4-205ENST00000423368 SUGP1Q8IWZ8 645 aaKnown RBP7.99□□□□□ -1.13
CNOT4-205ENST00000423368 HINFPQ9BQA5 517 aa7.99□□□□□ -1.13
CNOT4-205ENST00000423368 SPATS2LQ9NUQ6 558 aaKnown RBP7.99□□□□□ -1.13
CNOT4-205ENST00000423368 KIF2AO00139 706 aaPredicted RBP7.98□□□□□ -1.13
CNOT4-205ENST00000423368 KINO60870 393 aaKnown RBP7.98□□□□□ -1.13
CNOT4-205ENST00000423368 CCDC192P0DO97 292 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 PPP2R1AP30153 589 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 C1QTNF12Q5T7M4 302 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 THEMIS2Q5TEJ8 643 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 ERCC4Q92889 916 aaPredicted RBP7.98□□□□□ -1.13
CNOT4-205ENST00000423368 SPDL1Q96EA4 605 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 SCLT1Q96NL6 688 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 EHD4Q9H223 541 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 NKTRP30414 1462 aaKnown RBP7.98□□□□□ -1.13
CNOT4-205ENST00000423368 CNNM3Q8NE01 707 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 ZNF483Q8TF39 744 aaPredicted RBP7.98□□□□□ -1.13
CNOT4-205ENST00000423368 ORC3Q9UBD5 711 aaPredicted RBP7.98□□□□□ -1.13
CNOT4-205ENST00000423368 AKAP2Q9Y2D5 859 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.98□□□□□ -1.137e-7■□□□□ 9.6
CNOT4-205ENST00000423368 KIF21AQ7Z4S6 1674 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 PAX3P23760 479 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 NEDD9Q14511 834 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 CCDC181Q5TID7 509 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 TEX11Q8IYF3 940 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 RPUSD2Q8IZ73 545 aaKnown RBP7.98□□□□□ -1.13
CNOT4-205ENST00000423368 ZNF232Q9UNY5 417 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 NAIPQ13075 1403 aa7.98□□□□□ -1.13
CNOT4-205ENST00000423368 ANKRD36BQ8N2N9 1353 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 VPS37CA5D8V6 355 aaPredicted RBP7.97□□□□□ -1.13
CNOT4-205ENST00000423368 ANKRD18AQ8IVF6 992 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 EFCAB13Q8IY85 973 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 EXOC4Q96A65 974 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 SRCIN1Q9C0H9 1055 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 CBX8Q9HC52 389 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 PER1O15534 1290 aaPredicted RBP7.97□□□□□ -1.13
CNOT4-205ENST00000423368 ZRANB2O95218 330 aaKnown RBP eCLIP7.97□□□□□ -1.137e-6■■■■■ 37.3
CNOT4-205ENST00000423368 ZKSCAN2Q63HK3 967 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 LRRC8AQ8IWT6 810 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 TMEM57Q8N5G2 664 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 SPDYE1Q8NFV5 336 aaPredicted RBP7.97□□□□□ -1.13
CNOT4-205ENST00000423368 CCDC26Q8TAB7 109 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 ARHGAP35Q9NRY4 1499 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 A0A087WUV0 522 aaPredicted RBP7.97□□□□□ -1.13
CNOT4-205ENST00000423368 PLEKHG3A1L390 1219 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 GOLGA6L4A6NEF3 574 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 ATP2C2O75185 946 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 ZNF75DP51815 510 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 DNM1Q05193 864 aaKnown RBP7.97□□□□□ -1.13
CNOT4-205ENST00000423368 HSP90B2PQ58FF3 399 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 TSHZ3Q63HK5 1081 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 CC2D1AQ6P1N0 951 aaPredicted RBP7.97□□□□□ -1.13
CNOT4-205ENST00000423368 CASC1Q6TDU7 716 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 FMNL3Q8IVF7 1028 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 ATL2Q8NHH9 583 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 DDX54Q8TDD1 881 aaKnown RBP7.97□□□□□ -1.13
CNOT4-205ENST00000423368 OTUD7AQ8TE49 926 aaPredicted RBP7.97□□□□□ -1.13
CNOT4-205ENST00000423368 YIPF3Q9GZM5 350 aa7.97□□□□□ -1.13
CNOT4-205ENST00000423368 ZMYM3Q14202 1370 aa7.96□□□□□ -1.13
CNOT4-205ENST00000423368 EXOC5O00471 708 aa7.96□□□□□ -1.13
CNOT4-205ENST00000423368 CDC45O75419 566 aa7.96□□□□□ -1.13
CNOT4-205ENST00000423368 IFIT2P09913 472 aaKnown RBP7.96□□□□□ -1.13
CNOT4-205ENST00000423368 GBP2P32456 591 aaPredicted RBP7.96□□□□□ -1.13
CNOT4-205ENST00000423368 SF3A3Q12874 501 aaKnown RBP eCLIP7.96□□□□□ -1.13
CNOT4-205ENST00000423368 MYLK4Q86YV6 388 aaPredicted RBP7.96□□□□□ -1.13
CNOT4-205ENST00000423368 TRMT2AQ8IZ69 625 aaKnown RBP7.96□□□□□ -1.13
CNOT4-205ENST00000423368 PROCA1Q8NCQ7 364 aaPredicted RBP7.96□□□□□ -1.13
CNOT4-205ENST00000423368 TRAIPQ9BWF2 469 aa7.96□□□□□ -1.13
CNOT4-205ENST00000423368 NBPF3Q9H094 633 aa7.96□□□□□ -1.13
CNOT4-205ENST00000423368 MTMR7Q9Y216 660 aa7.96□□□□□ -1.13
CNOT4-205ENST00000423368 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.96□□□□□ -1.14
CNOT4-205ENST00000423368 GOLGA6L19H0YKK7 550 aa7.96□□□□□ -1.14
CNOT4-205ENST00000423368 ELL2O00472 640 aaPredicted RBP7.96□□□□□ -1.14
CNOT4-205ENST00000423368 TRIM27P14373 513 aa7.96□□□□□ -1.14
CNOT4-205ENST00000423368 USP8P40818 1118 aa7.96□□□□□ -1.14
CNOT4-205ENST00000423368 ZNF165P49910 485 aa7.96□□□□□ -1.14
CNOT4-205ENST00000423368 TYRO3Q06418 890 aa7.96□□□□□ -1.14
CNOT4-205ENST00000423368 GOLGA8FQ08AF8 430 aa7.96□□□□□ -1.14
CNOT4-205ENST00000423368 GOLGA8DPQ0D2H9 430 aa7.96□□□□□ -1.14
CNOT4-205ENST00000423368 KCNB1Q14721 858 aa7.96□□□□□ -1.14
CNOT4-205ENST00000423368 AKNAD1Q5T1N1 836 aa7.96□□□□□ -1.14
CNOT4-205ENST00000423368 RBM26Q5T8P6 1007 aaKnown RBP7.96□□□□□ -1.14
CNOT4-205ENST00000423368 KIAA0825Q8IV33 1275 aa7.96□□□□□ -1.14
CNOT4-205ENST00000423368 ARMC2Q8NEN0 867 aa7.96□□□□□ -1.14
CNOT4-205ENST00000423368 RIN2Q8WYP3 895 aaPredicted RBP7.96□□□□□ -1.14
CNOT4-205ENST00000423368 BRD1O95696 1058 aa7.95□□□□□ -1.14
CNOT4-205ENST00000423368 CAVIN2O95810 425 aa7.95□□□□□ -1.14
CNOT4-205ENST00000423368 INPP5BP32019 993 aa7.95□□□□□ -1.14
CNOT4-205ENST00000423368 FKBP15Q5T1M5 1219 aa7.95□□□□□ -1.14
CNOT4-205ENST00000423368 IQCA1Q86XH1 822 aa7.95□□□□□ -1.14
CNOT4-205ENST00000423368 C3orf20Q8ND61 904 aa7.95□□□□□ -1.14
CNOT4-205ENST00000423368 FAM200AQ8TCP9 573 aa7.95□□□□□ -1.14
CNOT4-205ENST00000423368 MICAL1Q8TDZ2 1067 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms