RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 PLEKHM2Q8IWE5 1019 aa17.87■□□□□ 0.45
SHISA9-201ENST00000423335 KIAA0232Q92628 1395 aa17.87■□□□□ 0.45
SHISA9-201ENST00000423335 VPS53Q5VIR6 699 aa17.87■□□□□ 0.45
SHISA9-201ENST00000423335 BLOC1S2Q6QNY1 142 aa17.87■□□□□ 0.45
SHISA9-201ENST00000423335 ABCA9Q8IUA7 1624 aa17.87■□□□□ 0.45
SHISA9-201ENST00000423335 NLRP1Q9C000 1473 aa17.87■□□□□ 0.45
SHISA9-201ENST00000423335 SYNE3Q6ZMZ3 975 aa17.87■□□□□ 0.45
SHISA9-201ENST00000423335 KLHDC4Q8TBB5 520 aa17.87■□□□□ 0.45
SHISA9-201ENST00000423335 NPC1L1Q9UHC9 1359 aa17.86■□□□□ 0.45
SHISA9-201ENST00000423335 HCLS1P14317 486 aaPredicted RBP17.86■□□□□ 0.45
SHISA9-201ENST00000423335 HMGN5P82970 282 aaKnown RBP17.86■□□□□ 0.45
SHISA9-201ENST00000423335 FILIP1Q7Z7B0 1213 aa17.86■□□□□ 0.45
SHISA9-201ENST00000423335 HELBQ8NG08 1087 aaPredicted RBP17.86■□□□□ 0.45
SHISA9-201ENST00000423335 RASSF8Q8NHQ8 419 aa17.86■□□□□ 0.45
SHISA9-201ENST00000423335 ATP2B1P20020 1258 aa17.86■□□□□ 0.45
SHISA9-201ENST00000423335 IGHMBP2P38935 993 aaKnown RBP17.86■□□□□ 0.45
SHISA9-201ENST00000423335 PDE1AP54750 535 aa17.86■□□□□ 0.45
SHISA9-201ENST00000423335 CWC25Q9NXE8 425 aaPredicted RBP17.86■□□□□ 0.45
SHISA9-201ENST00000423335 PIK3R4Q99570 1358 aa17.86■□□□□ 0.45
SHISA9-201ENST00000423335 CHL1O00533 1208 aa17.86■□□□□ 0.45
SHISA9-201ENST00000423335 ANKRD44Q8N8A2 993 aa17.86■□□□□ 0.45
SHISA9-201ENST00000423335 TFIP11Q9UBB9 837 aaKnown RBP17.86■□□□□ 0.45
SHISA9-201ENST00000423335 CKAP2LQ8IYA6 745 aa17.85■□□□□ 0.45
SHISA9-201ENST00000423335 ARHGAP45Q92619 1136 aa17.85■□□□□ 0.45
SHISA9-201ENST00000423335 ZFYVE9O95405 1425 aa17.85■□□□□ 0.45
SHISA9-201ENST00000423335 LETM1O95202 739 aaPredicted RBP17.85■□□□□ 0.45
SHISA9-201ENST00000423335 AKAP17AQ02040 695 aaKnown RBP17.85■□□□□ 0.45
SHISA9-201ENST00000423335 AK7Q96M32 723 aa17.85■□□□□ 0.45
SHISA9-201ENST00000423335 TCEANC2Q96MN5 208 aa17.85■□□□□ 0.45
SHISA9-201ENST00000423335 LRP2BPQ9P2M1 347 aa17.85■□□□□ 0.45
SHISA9-201ENST00000423335 RAI14Q9P0K7 980 aa17.85■□□□□ 0.45
SHISA9-201ENST00000423335 USP16Q9Y5T5 823 aa17.85■□□□□ 0.45
SHISA9-201ENST00000423335 KINO60870 393 aaKnown RBP17.84■□□□□ 0.45
SHISA9-201ENST00000423335 DNAJC10Q8IXB1 793 aa17.84■□□□□ 0.45
SHISA9-201ENST00000423335 TRMT2AQ8IZ69 625 aaKnown RBP17.84■□□□□ 0.45
SHISA9-201ENST00000423335 KSR2Q6VAB6 950 aa17.84■□□□□ 0.45
SHISA9-201ENST00000423335 SPATA32Q96LK8 384 aa17.84■□□□□ 0.45
SHISA9-201ENST00000423335 CHAMP1Q96JM3 812 aa17.84■□□□□ 0.45
SHISA9-201ENST00000423335 BCORL1Q5H9F3 1711 aa17.84■□□□□ 0.45
SHISA9-201ENST00000423335 KIF1BO60333 1816 aa17.84■□□□□ 0.45
SHISA9-201ENST00000423335 ARHGEF25Q86VW2 580 aa17.83■□□□□ 0.45
SHISA9-201ENST00000423335 FAM89AQ96GI7 184 aa17.83■□□□□ 0.45
SHISA9-201ENST00000423335 TRIM34Q9BYJ4 488 aa17.83■□□□□ 0.45
SHISA9-201ENST00000423335 GRM8O00222 908 aa17.83■□□□□ 0.45
SHISA9-201ENST00000423335 ZNF652Q9Y2D9 606 aa17.83■□□□□ 0.45
SHISA9-201ENST00000423335 RFC4P35249 363 aa17.83■□□□□ 0.44
SHISA9-201ENST00000423335 NUP62CLQ9H1M0 184 aa17.83■□□□□ 0.44
SHISA9-201ENST00000423335 DCTPP1Q9H773 170 aa17.83■□□□□ 0.44
SHISA9-201ENST00000423335 PLXNC1O60486 1568 aa17.83■□□□□ 0.44
SHISA9-201ENST00000423335 ME1P48163 572 aa17.82■□□□□ 0.44
SHISA9-201ENST00000423335 RBM25P49756 843 aaKnown RBP17.82■□□□□ 0.44
SHISA9-201ENST00000423335 MTERF4Q7Z6M4 381 aaKnown RBP17.82■□□□□ 0.44
SHISA9-201ENST00000423335 ANKIB1Q9P2G1 1089 aa17.82■□□□□ 0.44
SHISA9-201ENST00000423335 NIP7Q9Y221 180 aaKnown RBP eCLIP17.82■□□□□ 0.44
SHISA9-201ENST00000423335 RAB11FIP3O75154 756 aa17.82■□□□□ 0.44
SHISA9-201ENST00000423335 IFIT1P09914 478 aaKnown RBP17.82■□□□□ 0.44
SHISA9-201ENST00000423335 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
SHISA9-201ENST00000423335 GIMAP6Q6P9H5 292 aa17.82■□□□□ 0.44
SHISA9-201ENST00000423335 CPLX2Q6PUV4 134 aaKnown RBP17.82■□□□□ 0.44
SHISA9-201ENST00000423335 AXIN2Q9Y2T1 843 aa17.82■□□□□ 0.44
SHISA9-201ENST00000423335 ARAP3Q8WWN8 1544 aa17.82■□□□□ 0.44
SHISA9-201ENST00000423335 PRAMEF22A3QJZ6 481 aa17.82■□□□□ 0.44
SHISA9-201ENST00000423335 SLC4A8Q2Y0W8 1093 aa17.82■□□□□ 0.44
SHISA9-201ENST00000423335 ZMYND15Q9H091 742 aa17.82■□□□□ 0.44
SHISA9-201ENST00000423335 ARHGAP31Q2M1Z3 1444 aa17.81■□□□□ 0.44
SHISA9-201ENST00000423335 SMC2O95347 1197 aa17.81■□□□□ 0.44
SHISA9-201ENST00000423335 ATP2B2Q01814 1243 aa17.81■□□□□ 0.44
SHISA9-201ENST00000423335 TET3O43151 1660 aa17.81■□□□□ 0.44
SHISA9-201ENST00000423335 CEP85Q6P2H3 762 aa17.81■□□□□ 0.44
SHISA9-201ENST00000423335 AMOTL1Q8IY63 956 aa17.81■□□□□ 0.44
SHISA9-201ENST00000423335 MYOM2P54296 1465 aa17.81■□□□□ 0.44
SHISA9-201ENST00000423335 RBM5P52756 815 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHISA9-201ENST00000423335 BRINP3Q76B58 766 aa17.81■□□□□ 0.44
SHISA9-201ENST00000423335 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
SHISA9-201ENST00000423335 RHPN1Q8TCX5 695 aa17.81■□□□□ 0.44
SHISA9-201ENST00000423335 UBE2Q2Q8WVN8 375 aa17.81■□□□□ 0.44
SHISA9-201ENST00000423335 RNF17Q9BXT8 1623 aaKnown RBP17.81■□□□□ 0.44
SHISA9-201ENST00000423335 CBX1P83916 185 aa17.8■□□□□ 0.44
SHISA9-201ENST00000423335 DDX46Q7L014 1031 aaKnown RBP17.8■□□□□ 0.44
SHISA9-201ENST00000423335 GOLIM4O00461 696 aa17.8■□□□□ 0.44
SHISA9-201ENST00000423335 ADCY5O95622 1261 aa17.8■□□□□ 0.44
SHISA9-201ENST00000423335 TNNT3P45378 269 aaPredicted RBP17.8■□□□□ 0.44
SHISA9-201ENST00000423335 NECAB1Q8N987 351 aa17.8■□□□□ 0.44
SHISA9-201ENST00000423335 TTC12Q9H892 705 aaPredicted RBP17.8■□□□□ 0.44
SHISA9-201ENST00000423335 MARCH6O60337 910 aa17.8■□□□□ 0.44
SHISA9-201ENST00000423335 GLRX3O76003 335 aaKnown RBP17.8■□□□□ 0.44
SHISA9-201ENST00000423335 USP26Q9BXU7 913 aa17.8■□□□□ 0.44
SHISA9-201ENST00000423335 LIMCH1Q9UPQ0 1083 aa17.8■□□□□ 0.44
SHISA9-201ENST00000423335 IQGAP3Q86VI3 1631 aa17.79■□□□□ 0.44
SHISA9-201ENST00000423335 CLSTN1O94985 981 aa17.79■□□□□ 0.44
SHISA9-201ENST00000423335 NBPF7P0C2Y1 421 aaPredicted RBP17.79■□□□□ 0.44
SHISA9-201ENST00000423335 NBPF5PQ86XG9 351 aaPredicted RBP17.79■□□□□ 0.44
SHISA9-201ENST00000423335 GAS2L3Q86XJ1 694 aa17.79■□□□□ 0.44
SHISA9-201ENST00000423335 USP19O94966 1318 aa17.79■□□□□ 0.44
SHISA9-201ENST00000423335 CCDC183Q5T5S1 534 aa17.79■□□□□ 0.44
SHISA9-201ENST00000423335 LRSAM1Q6UWE0 723 aa17.79■□□□□ 0.44
SHISA9-201ENST00000423335 USP21Q9UK80 565 aa17.79■□□□□ 0.44
SHISA9-201ENST00000423335 SHROOM2Q13796 1616 aa17.79■□□□□ 0.44
SHISA9-201ENST00000423335 PIBF1Q8WXW3 757 aa17.79■□□□□ 0.44
SHISA9-201ENST00000423335 CNPY2Q9Y2B0 182 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms