RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 EFCC1Q9HA90 598 aa15.65■□□□□ 0.1
CALD1-205ENST00000422748 H2AFXP16104 143 aaPredicted RBP15.64■□□□□ 0.09
CALD1-205ENST00000422748 LIG1P18858 919 aa15.64■□□□□ 0.09
CALD1-205ENST00000422748 SSH2Q76I76 1423 aa15.64■□□□□ 0.09
CALD1-205ENST00000422748 PLA2G4AP47712 749 aa15.64■□□□□ 0.09
CALD1-205ENST00000422748 LRRC8AQ8IWT6 810 aa15.64■□□□□ 0.09
CALD1-205ENST00000422748 A2ML1A8K2U0 1454 aa15.64■□□□□ 0.09
CALD1-205ENST00000422748 PTPRCP08575 1304 aa15.64■□□□□ 0.09
CALD1-205ENST00000422748 TUBGCP6Q96RT7 1819 aa15.63■□□□□ 0.09
CALD1-205ENST00000422748 FYB1O15117 783 aa15.63■□□□□ 0.09
CALD1-205ENST00000422748 HMOX1P09601 288 aa15.63■□□□□ 0.09
CALD1-205ENST00000422748 IL25Q9H293 177 aa15.63■□□□□ 0.09
CALD1-205ENST00000422748 PNPLA6Q8IY17 1366 aa15.63■□□□□ 0.09
CALD1-205ENST00000422748 AK2P54819 239 aa15.63■□□□□ 0.09
CALD1-205ENST00000422748 ERCC6LQ2NKX8 1250 aa15.63■□□□□ 0.09
CALD1-205ENST00000422748 TDRD7Q8NHU6 1098 aaKnown RBP15.63■□□□□ 0.09
CALD1-205ENST00000422748 TRMT1Q9NXH9 659 aaKnown RBP15.63■□□□□ 0.09
CALD1-205ENST00000422748 MTMR6Q9Y217 621 aa15.63■□□□□ 0.09
CALD1-205ENST00000422748 HSPA4P34932 840 aa15.62■□□□□ 0.09
CALD1-205ENST00000422748 CLCN6P51797 869 aa15.62■□□□□ 0.09
CALD1-205ENST00000422748 RASSF4Q9H2L5 321 aa15.62■□□□□ 0.09
CALD1-205ENST00000422748 ARHGEF28Q8N1W1 1705 aaKnown RBP15.62■□□□□ 0.09
CALD1-205ENST00000422748 PNMA6AP0CW24 399 aaPredicted RBP15.62■□□□□ 0.09
CALD1-205ENST00000422748 RNF20Q5VTR2 975 aa15.62■□□□□ 0.09
CALD1-205ENST00000422748 SYT10Q6XYQ8 523 aa15.62■□□□□ 0.09
CALD1-205ENST00000422748 RUFY3Q7L099 469 aa15.62■□□□□ 0.09
CALD1-205ENST00000422748 SALL3Q9BXA9 1300 aa15.62■□□□□ 0.09
CALD1-205ENST00000422748 TTC6Q86TZ1 520 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 CHMP4CQ96CF2 233 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 TTC14Q96N46 770 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 TNMDQ9H2S6 317 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 POLR3GO15318 223 aaPredicted RBP15.61■□□□□ 0.09
CALD1-205ENST00000422748 GJB2P29033 226 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 KRBA2Q6ZNG9 492 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 UNC5CLQ8IV45 518 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.61■□□□□ 0.09
CALD1-205ENST00000422748 TMX1Q9H3N1 280 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 EXOC6BQ9Y2D4 811 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 HTATSF1O43719 755 aaKnown RBP15.61■□□□□ 0.09
CALD1-205ENST00000422748 HMMRO75330 724 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 LARGE1O95461 756 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 SKILP12757 684 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 NOP2P46087 812 aaKnown RBP15.61■□□□□ 0.09
CALD1-205ENST00000422748 MUM1L1Q5H9M0 696 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 LRRN4CLQ8ND94 238 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 LIMCH1Q9UPQ0 1083 aa15.61■□□□□ 0.09
CALD1-205ENST00000422748 TEX35Q5T0J7 233 aa15.6■□□□□ 0.09
CALD1-205ENST00000422748 PSMD1Q99460 953 aa15.6■□□□□ 0.09
CALD1-205ENST00000422748 CDC42BPGQ6DT37 1551 aa15.6■□□□□ 0.09
CALD1-205ENST00000422748 ANKRD26Q9UPS8 1709 aa15.6■□□□□ 0.09
CALD1-205ENST00000422748 VPS37CA5D8V6 355 aaPredicted RBP15.6■□□□□ 0.09
CALD1-205ENST00000422748 TRIM66O15016 1216 aa15.6■□□□□ 0.09
CALD1-205ENST00000422748 SAFB2Q14151 953 aaKnown RBP eCLIP15.6■□□□□ 0.09
CALD1-205ENST00000422748 TXLNBQ8N3L3 684 aa15.6■□□□□ 0.09
CALD1-205ENST00000422748 DNAJC25Q9H1X3 360 aa15.6■□□□□ 0.09
CALD1-205ENST00000422748 YY1AP1Q9H869 796 aa15.6■□□□□ 0.09
CALD1-205ENST00000422748 DACT1Q9NYF0 836 aa15.6■□□□□ 0.09
CALD1-205ENST00000422748 POLKQ9UBT6 870 aa15.6■□□□□ 0.09
CALD1-205ENST00000422748 CDC25BP30305 580 aa15.59■□□□□ 0.09
CALD1-205ENST00000422748 ZNF165P49910 485 aa15.59■□□□□ 0.09
CALD1-205ENST00000422748 CCDC83Q8IWF9 413 aa15.59■□□□□ 0.09
CALD1-205ENST00000422748 C10orf67Q8IYJ2 551 aa15.59■□□□□ 0.09
CALD1-205ENST00000422748 KIAA0232Q92628 1395 aa15.59■□□□□ 0.09
CALD1-205ENST00000422748 ST5P78524 1137 aa15.59■□□□□ 0.09
CALD1-205ENST00000422748 CCAR2Q8N163 923 aaKnown RBP15.59■□□□□ 0.09
CALD1-205ENST00000422748 LCMT1Q9UIC8 334 aa15.59■□□□□ 0.09
CALD1-205ENST00000422748 SNX14Q9Y5W7 946 aa15.59■□□□□ 0.09
CALD1-205ENST00000422748 DHX16O60231 1041 aaKnown RBP15.58■□□□□ 0.08
CALD1-205ENST00000422748 FBLN1P23142 703 aa15.58■□□□□ 0.08
CALD1-205ENST00000422748 FAM83GA6ND36 823 aa15.58■□□□□ 0.08
CALD1-205ENST00000422748 MYO1CO00159 1063 aa15.58■□□□□ 0.08
CALD1-205ENST00000422748 CCZ1BP86790 482 aa15.58■□□□□ 0.08
CALD1-205ENST00000422748 CCZ1P86791 482 aaPredicted RBP15.58■□□□□ 0.08
CALD1-205ENST00000422748 SMARCE1Q969G3 411 aa15.58■□□□□ 0.08
CALD1-205ENST00000422748 ALKQ9UM73 1620 aa15.57■□□□□ 0.08
CALD1-205ENST00000422748 NEMFO60524 1076 aa15.57■□□□□ 0.08
CALD1-205ENST00000422748 CPA1P15085 419 aa15.57■□□□□ 0.08
CALD1-205ENST00000422748 GYS2P54840 703 aa15.57■□□□□ 0.08
CALD1-205ENST00000422748 LRRFIP2Q9Y608 721 aaKnown RBP15.57■□□□□ 0.08
CALD1-205ENST00000422748 CCDC69A6NI79 296 aa15.57■□□□□ 0.08
CALD1-205ENST00000422748 TPM4P67936 248 aa15.57■□□□□ 0.08
CALD1-205ENST00000422748 FAM173BQ6P4H8 233 aa15.57■□□□□ 0.08
CALD1-205ENST00000422748 ZRANB2O95218 330 aaKnown RBP eCLIP15.56■□□□□ 0.08
CALD1-205ENST00000422748 ARHGAP29Q52LW3 1261 aa15.56■□□□□ 0.08
CALD1-205ENST00000422748 RASEFQ8IZ41 740 aa15.56■□□□□ 0.08
CALD1-205ENST00000422748 L2HGDHQ9H9P8 463 aa15.56■□□□□ 0.08
CALD1-205ENST00000422748 AATKQ6ZMQ8 1374 aa15.56■□□□□ 0.08
CALD1-205ENST00000422748 KRT85P78386 507 aa15.56■□□□□ 0.08
CALD1-205ENST00000422748 DCTN1Q14203 1278 aa15.56■□□□□ 0.08
CALD1-205ENST00000422748 GEMIN8Q9NWZ8 242 aaKnown RBP15.56■□□□□ 0.08
CALD1-205ENST00000422748 RIMS2Q9UQ26 1411 aa15.56■□□□□ 0.08
CALD1-205ENST00000422748 RBM43Q6ZSC3 357 aaKnown RBP15.55■□□□□ 0.08
CALD1-205ENST00000422748 CCDC191Q8NCU4 936 aa15.55■□□□□ 0.08
CALD1-205ENST00000422748 LRRCC1Q9C099 1032 aa15.55■□□□□ 0.08
CALD1-205ENST00000422748 USP16Q9Y5T5 823 aa15.55■□□□□ 0.08
CALD1-205ENST00000422748 SETD1AO15047 1707 aaKnown RBP15.55■□□□□ 0.08
CALD1-205ENST00000422748 PTPRMP28827 1452 aa15.55■□□□□ 0.08
CALD1-205ENST00000422748 CASQ1P31415 396 aa15.55■□□□□ 0.08
CALD1-205ENST00000422748 FILIP1Q7Z7B0 1213 aa15.55■□□□□ 0.08
CALD1-205ENST00000422748 FERMT3Q86UX7 667 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms