RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 FAM177BA6PVY3 158 aa12.53□□□□□ -0.4
SCRN1-204ENST00000421434 DDNO94850 711 aaPredicted RBP12.53□□□□□ -0.4
SCRN1-204ENST00000421434 SNRPA1P09661 255 aaKnown RBP12.53□□□□□ -0.4
SCRN1-204ENST00000421434 STYK1Q6J9G0 422 aa12.53□□□□□ -0.4
SCRN1-204ENST00000421434 NBPF5PQ86XG9 351 aaPredicted RBP12.53□□□□□ -0.4
SCRN1-204ENST00000421434 MASTLQ96GX5 879 aa12.53□□□□□ -0.4
SCRN1-204ENST00000421434 UBR2Q8IWV8 1755 aa12.53□□□□□ -0.4
SCRN1-204ENST00000421434 TNRC6CQ9HCJ0 1690 aaKnown RBP12.52□□□□□ -0.4
SCRN1-204ENST00000421434 CAPN15O75808 1086 aa12.52□□□□□ -0.41
SCRN1-204ENST00000421434 PPP2R1AP30153 589 aa12.52□□□□□ -0.41
SCRN1-204ENST00000421434 MIS18AQ9NYP9 233 aa12.52□□□□□ -0.41
SCRN1-204ENST00000421434 CCDC88AQ3V6T2 1871 aa12.51□□□□□ -0.41
SCRN1-204ENST00000421434 NBPF26B4DH59 902 aa12.51□□□□□ -0.41
SCRN1-204ENST00000421434 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
SCRN1-204ENST00000421434 POTEJP0CG39 1038 aa12.51□□□□□ -0.41
SCRN1-204ENST00000421434 NBPF10Q6P3W6 841 aaKnown RBP12.51□□□□□ -0.41
SCRN1-204ENST00000421434 CLEC4GQ6UXB4 293 aa12.51□□□□□ -0.41
SCRN1-204ENST00000421434 NBPF15Q8N660 670 aa12.51□□□□□ -0.41
SCRN1-204ENST00000421434 NIP7Q9Y221 180 aaKnown RBP eCLIP12.51□□□□□ -0.41
SCRN1-204ENST00000421434 OLFM4Q6UX06 510 aa12.5□□□□□ -0.41
SCRN1-204ENST00000421434 TPTE2Q6XPS3 522 aa12.5□□□□□ -0.41
SCRN1-204ENST00000421434 NGEFQ8N5V2 710 aa12.5□□□□□ -0.41
SCRN1-204ENST00000421434 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
SCRN1-204ENST00000421434 ZNF652Q9Y2D9 606 aa12.5□□□□□ -0.41
SCRN1-204ENST00000421434 LTBP3Q9NS15 1303 aa12.5□□□□□ -0.41
SCRN1-204ENST00000421434 DLEC1Q9Y238 1755 aa12.5□□□□□ -0.41
SCRN1-204ENST00000421434 ANKRD31Q8N7Z5 1873 aa12.5□□□□□ -0.41
SCRN1-204ENST00000421434 HSPA1AP0DMV8 641 aaKnown RBP12.49□□□□□ -0.41
SCRN1-204ENST00000421434 HSPA1BP0DMV9 641 aaKnown RBP12.49□□□□□ -0.41
SCRN1-204ENST00000421434 NPR1P16066 1061 aa12.49□□□□□ -0.41
SCRN1-204ENST00000421434 TAF7Q15545 349 aaPredicted RBP12.49□□□□□ -0.41
SCRN1-204ENST00000421434 HLFQ16534 295 aa12.49□□□□□ -0.41
SCRN1-204ENST00000421434 SOGA3Q5TF21 947 aa12.49□□□□□ -0.41
SCRN1-204ENST00000421434 CHADLQ6NUI6 762 aa12.49□□□□□ -0.41
SCRN1-204ENST00000421434 TNS4Q8IZW8 715 aa12.49□□□□□ -0.41
SCRN1-204ENST00000421434 GTF2E1P29083 439 aaPredicted RBP12.48□□□□□ -0.41
SCRN1-204ENST00000421434 CCDC93Q567U6 631 aa12.48□□□□□ -0.41
SCRN1-204ENST00000421434 ZNF277Q9NRM2 450 aaPredicted RBP12.48□□□□□ -0.41
SCRN1-204ENST00000421434 MKRN1Q9UHC7 482 aaKnown RBP12.48□□□□□ -0.41
SCRN1-204ENST00000421434 SLX4Q8IY92 1834 aa12.48□□□□□ -0.41
SCRN1-204ENST00000421434 SIPA1L3O60292 1781 aaPredicted RBP12.48□□□□□ -0.41
SCRN1-204ENST00000421434 HTATSF1O43719 755 aaKnown RBP12.47□□□□□ -0.41
SCRN1-204ENST00000421434 SCN7AQ01118 1682 aa12.47□□□□□ -0.41
SCRN1-204ENST00000421434 COL11A2P13942 1736 aaPredicted RBP12.46□□□□□ -0.41
SCRN1-204ENST00000421434 TIAM2Q8IVF5 1701 aa12.46□□□□□ -0.41
SCRN1-204ENST00000421434 KLRG2A4D1S0 409 aaPredicted RBP12.46□□□□□ -0.41
SCRN1-204ENST00000421434 FKBP4Q02790 459 aaKnown RBP eCLIP12.46□□□□□ -0.41
SCRN1-204ENST00000421434 EAPPQ56P03 285 aaPredicted RBP12.46□□□□□ -0.41
SCRN1-204ENST00000421434 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
SCRN1-204ENST00000421434 RRP7AQ9Y3A4 280 aaKnown RBP12.46□□□□□ -0.41
SCRN1-204ENST00000421434 FER1L6Q2WGJ9 1857 aa12.46□□□□□ -0.42
SCRN1-204ENST00000421434 IQCA1LA6NCM1 817 aa12.45□□□□□ -0.42
SCRN1-204ENST00000421434 ALDH1B1P30837 517 aa12.45□□□□□ -0.42
SCRN1-204ENST00000421434 NUTM1Q86Y26 1132 aa12.45□□□□□ -0.42
SCRN1-204ENST00000421434 SYNE4Q8N205 404 aa12.45□□□□□ -0.42
SCRN1-204ENST00000421434 PIAS4Q8N2W9 510 aaPredicted RBP12.45□□□□□ -0.42
SCRN1-204ENST00000421434 TAF1DQ9H5J8 278 aaPredicted RBP12.45□□□□□ -0.42
SCRN1-204ENST00000421434 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
SCRN1-204ENST00000421434 ZNF541Q9H0D2 1346 aa12.44□□□□□ -0.42
SCRN1-204ENST00000421434 NEFMP07197 916 aa12.44□□□□□ -0.42
SCRN1-204ENST00000421434 MYL6BP14649 208 aa12.44□□□□□ -0.42
SCRN1-204ENST00000421434 LDHDQ86WU2 507 aa12.44□□□□□ -0.42
SCRN1-204ENST00000421434 RTKN2Q8IZC4 609 aa12.44□□□□□ -0.42
SCRN1-204ENST00000421434 THUMPD2Q9BTF0 503 aaKnown RBP12.44□□□□□ -0.42
SCRN1-204ENST00000421434 GPTP24298 496 aa12.43□□□□□ -0.42
SCRN1-204ENST00000421434 TTLL7Q6ZT98 887 aa12.43□□□□□ -0.42
SCRN1-204ENST00000421434 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
SCRN1-204ENST00000421434 TCERG1O14776 1098 aaKnown RBP12.42□□□□□ -0.42
SCRN1-204ENST00000421434 RGL2O15211 777 aa12.42□□□□□ -0.42
SCRN1-204ENST00000421434 EPHX2P34913 555 aa12.42□□□□□ -0.42
SCRN1-204ENST00000421434 IARSP41252 1262 aaKnown RBP12.42□□□□□ -0.42
SCRN1-204ENST00000421434 ZBTB3Q9H5J0 574 aa12.42□□□□□ -0.42
SCRN1-204ENST00000421434 HACL1Q9UJ83 578 aa12.42□□□□□ -0.42
SCRN1-204ENST00000421434 DICER1Q9UPY3 1922 aaKnown RBP12.42□□□□□ -0.42
SCRN1-204ENST00000421434 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
SCRN1-204ENST00000421434 RNF123Q5XPI4 1314 aa12.41□□□□□ -0.42
SCRN1-204ENST00000421434 ERVV-1B6SEH8 477 aa12.41□□□□□ -0.42
SCRN1-204ENST00000421434 ITGBL1O95965 494 aaPredicted RBP12.41□□□□□ -0.42
SCRN1-204ENST00000421434 EIF4A1P60842 406 aaKnown RBP12.41□□□□□ -0.42
SCRN1-204ENST00000421434 KIF6Q6ZMV9 814 aa12.41□□□□□ -0.42
SCRN1-204ENST00000421434 PNISRQ8TF01 805 aaKnown RBP12.41□□□□□ -0.42
SCRN1-204ENST00000421434 JDP2Q8WYK2 163 aa12.41□□□□□ -0.42
SCRN1-204ENST00000421434 NYXQ9GZU5 481 aa12.41□□□□□ -0.42
SCRN1-204ENST00000421434 GJA3Q9Y6H8 435 aa12.41□□□□□ -0.42
SCRN1-204ENST00000421434 BCORQ6W2J9 1755 aa12.41□□□□□ -0.42
SCRN1-204ENST00000421434 MAP3K15Q6ZN16 1313 aa12.4□□□□□ -0.42
SCRN1-204ENST00000421434 PASKQ96RG2 1323 aa12.4□□□□□ -0.42
SCRN1-204ENST00000421434 TMEM88BA6NKF7 163 aa12.4□□□□□ -0.42
SCRN1-204ENST00000421434 FZD9O00144 591 aa12.4□□□□□ -0.42
SCRN1-204ENST00000421434 CRY2Q49AN0 593 aa12.4□□□□□ -0.42
SCRN1-204ENST00000421434 SUSD4Q5VX71 490 aa12.4□□□□□ -0.42
SCRN1-204ENST00000421434 MAP1SQ66K74 1059 aaPredicted RBP12.4□□□□□ -0.42
SCRN1-204ENST00000421434 CNTROBQ8N137 903 aa12.4□□□□□ -0.42
SCRN1-204ENST00000421434 RPGRQ92834 1020 aaKnown RBP12.4□□□□□ -0.42
SCRN1-204ENST00000421434 PLEKHF1Q96S99 279 aa12.4□□□□□ -0.42
SCRN1-204ENST00000421434 FOXN1O15353 648 aa12.39□□□□□ -0.43
SCRN1-204ENST00000421434 VEGFBP49765 207 aa12.39□□□□□ -0.43
SCRN1-204ENST00000421434 NFE2L2Q16236 605 aa12.39□□□□□ -0.43
SCRN1-204ENST00000421434 SLC51AQ86UW1 340 aa12.39□□□□□ -0.43
SCRN1-204ENST00000421434 ABCC12Q96J65 1359 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 1089.9 ms