RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 TM4SF1P30408 202 aa26.6■■□□□ 1.85
HMGXB4-203ENST00000420166 NFIXQ14938 502 aa26.6■■□□□ 1.85
HMGXB4-203ENST00000420166 KIF6Q6ZMV9 814 aa26.6■■□□□ 1.85
HMGXB4-203ENST00000420166 HYPKQ9NX55 129 aa26.6■■□□□ 1.85
HMGXB4-203ENST00000420166 MAP3K15Q6ZN16 1313 aa26.6■■□□□ 1.85
HMGXB4-203ENST00000420166 VAMP4O75379 141 aa26.59■■□□□ 1.85
HMGXB4-203ENST00000420166 DDR1Q08345 913 aa26.59■■□□□ 1.85
HMGXB4-203ENST00000420166 CLEC4GQ6UXB4 293 aa26.59■■□□□ 1.85
HMGXB4-203ENST00000420166 XAGE3Q8WTP9 111 aa26.59■■□□□ 1.85
HMGXB4-203ENST00000420166 ZNF652Q9Y2D9 606 aa26.59■■□□□ 1.85
HMGXB4-203ENST00000420166 ERVV-1B6SEH8 477 aa26.58■■□□□ 1.85
HMGXB4-203ENST00000420166 TBC1D9BQ66K14 1250 aa26.58■■□□□ 1.85
HMGXB4-203ENST00000420166 COPS6Q7L5N1 327 aa26.58■■□□□ 1.85
HMGXB4-203ENST00000420166 TRMT2AQ8IZ69 625 aaKnown RBP26.58■■□□□ 1.85
HMGXB4-203ENST00000420166 PARP3Q9Y6F1 533 aa26.58■■□□□ 1.85
HMGXB4-203ENST00000420166 AFDNP55196 1824 aaKnown RBP26.58■■□□□ 1.84
HMGXB4-203ENST00000420166 POLRMTO00411 1230 aaKnown RBP26.56■■□□□ 1.84
HMGXB4-203ENST00000420166 AIMP1Q12904 312 aaKnown RBP26.56■■□□□ 1.84
HMGXB4-203ENST00000420166 HLFQ16534 295 aa26.56■■□□□ 1.84
HMGXB4-203ENST00000420166 BICDL1Q6ZP65 573 aa26.56■■□□□ 1.84
HMGXB4-203ENST00000420166 STK31Q9BXU1 1019 aa26.56■■□□□ 1.84
HMGXB4-203ENST00000420166 ZBTB3Q9H5J0 574 aa26.56■■□□□ 1.84
HMGXB4-203ENST00000420166 FHDC1Q9C0D6 1143 aaPredicted RBP26.55■■□□□ 1.84
HMGXB4-203ENST00000420166 NRXN2Q9P2S2 1712 aa26.55■■□□□ 1.84
HMGXB4-203ENST00000420166 ZBED9Q6R2W3 1325 aa26.55■■□□□ 1.84
HMGXB4-203ENST00000420166 TCERG1O14776 1098 aaKnown RBP26.54■■□□□ 1.84
HMGXB4-203ENST00000420166 KIF13BQ9NQT8 1826 aa26.53■■□□□ 1.84
HMGXB4-203ENST00000420166 CARMIL3Q8ND23 1372 aa26.53■■□□□ 1.84
HMGXB4-203ENST00000420166 ATP10DQ9P241 1426 aa26.53■■□□□ 1.84
HMGXB4-203ENST00000420166 ANKRD36CQ5JPF3 1778 aa26.52■■□□□ 1.84
HMGXB4-203ENST00000420166 GIGYF2Q6Y7W6 1299 aaKnown RBP26.52■■□□□ 1.84
HMGXB4-203ENST00000420166 KLHL34Q8N239 644 aa26.52■■□□□ 1.84
HMGXB4-203ENST00000420166 PHAXQ9H814 394 aaKnown RBP26.52■■□□□ 1.84
HMGXB4-203ENST00000420166 C10orf71Q711Q0 1435 aa26.51■■□□□ 1.83
HMGXB4-203ENST00000420166 SETDB2Q96T68 719 aa26.51■■□□□ 1.83
HMGXB4-203ENST00000420166 ARFGEF2Q9Y6D5 1785 aa26.51■■□□□ 1.83
HMGXB4-203ENST00000420166 SERPINB2P05120 415 aa26.5■■□□□ 1.83
HMGXB4-203ENST00000420166 PLBD2Q8NHP8 589 aa26.5■■□□□ 1.83
HMGXB4-203ENST00000420166 SYT17Q9BSW7 474 aa26.5■■□□□ 1.83
HMGXB4-203ENST00000420166 NIP7Q9Y221 180 aaKnown RBP eCLIP26.5■■□□□ 1.83
HMGXB4-203ENST00000420166 CD2APQ9Y5K6 639 aa26.5■■□□□ 1.83
HMGXB4-203ENST00000420166 SLC4A2P04920 1241 aa26.49■■□□□ 1.83
HMGXB4-203ENST00000420166 ANKRD13DQ6ZTN6 518 aa26.49■■□□□ 1.83
HMGXB4-203ENST00000420166 G2E3Q7L622 706 aa26.46■■□□□ 1.83
HMGXB4-203ENST00000420166 ZNF34Q8IZ26 560 aa26.46■■□□□ 1.83
HMGXB4-203ENST00000420166 GPTP24298 496 aa26.45■■□□□ 1.82
HMGXB4-203ENST00000420166 HSP90AB3PQ58FF7 597 aa26.45■■□□□ 1.82
HMGXB4-203ENST00000420166 KIAA1551Q9HCM1 1747 aa26.45■■□□□ 1.82
HMGXB4-203ENST00000420166 UBN2Q6ZU65 1347 aa26.44■■□□□ 1.82
HMGXB4-203ENST00000420166 DDX58O95786 925 aaKnown RBP26.44■■□□□ 1.82
HMGXB4-203ENST00000420166 CT47B1P0C2W7 299 aaPredicted RBP26.44■■□□□ 1.82
HMGXB4-203ENST00000420166 TCIRG1Q13488 830 aa26.44■■□□□ 1.82
HMGXB4-203ENST00000420166 NLGN2Q8NFZ4 835 aa26.44■■□□□ 1.82
HMGXB4-203ENST00000420166 ZNF428Q96B54 188 aa26.44■■□□□ 1.82
HMGXB4-203ENST00000420166 FLIIQ13045 1269 aa26.43■■□□□ 1.82
HMGXB4-203ENST00000420166 RIC3Q7Z5B4 369 aa26.43■■□□□ 1.82
HMGXB4-203ENST00000420166 NBPF5PQ86XG9 351 aaPredicted RBP26.43■■□□□ 1.82
HMGXB4-203ENST00000420166 CNBD1Q8NA66 436 aa26.43■■□□□ 1.82
HMGXB4-203ENST00000420166 ANKRD31Q8N7Z5 1873 aa26.42■■□□□ 1.82
HMGXB4-203ENST00000420166 PRR5LQ6MZQ0 368 aa26.42■■□□□ 1.82
HMGXB4-203ENST00000420166 N4BP2Q86UW6 1770 aaPredicted RBP26.41■■□□□ 1.82
HMGXB4-203ENST00000420166 PARP10Q53GL7 1025 aa26.41■■□□□ 1.82
HMGXB4-203ENST00000420166 ADCY9O60503 1353 aa26.41■■□□□ 1.82
HMGXB4-203ENST00000420166 IBTKQ9P2D0 1353 aaPredicted RBP26.41■■□□□ 1.82
HMGXB4-203ENST00000420166 FAM177BA6PVY3 158 aa26.4■■□□□ 1.82
HMGXB4-203ENST00000420166 NPHP1O15259 732 aa26.4■■□□□ 1.82
HMGXB4-203ENST00000420166 KSR2Q6VAB6 950 aa26.4■■□□□ 1.82
HMGXB4-203ENST00000420166 PXDNLA1KZ92 1463 aa26.4■■□□□ 1.82
HMGXB4-203ENST00000420166 PI4KAP2A4QPH2 592 aa26.39■■□□□ 1.82
HMGXB4-203ENST00000420166 SUSD4Q5VX71 490 aa26.39■■□□□ 1.82
HMGXB4-203ENST00000420166 TPTE2Q6XPS3 522 aa26.39■■□□□ 1.82
HMGXB4-203ENST00000420166 PI4KAP1Q8N8J0 262 aa26.39■■□□□ 1.82
HMGXB4-203ENST00000420166 SSH1Q8WYL5 1049 aa26.39■■□□□ 1.82
HMGXB4-203ENST00000420166 NYXQ9GZU5 481 aa26.39■■□□□ 1.82
HMGXB4-203ENST00000420166 TGFB2P61812 414 aa26.38■■□□□ 1.81
HMGXB4-203ENST00000420166 ST5P78524 1137 aa26.38■■□□□ 1.81
HMGXB4-203ENST00000420166 FKBP5Q13451 457 aaPredicted RBP26.38■■□□□ 1.81
HMGXB4-203ENST00000420166 ALDH1L2Q3SY69 923 aa26.38■■□□□ 1.81
HMGXB4-203ENST00000420166 CCDC24Q8N4L8 307 aa26.38■■□□□ 1.81
HMGXB4-203ENST00000420166 ISCA1Q9BUE6 129 aa26.38■■□□□ 1.81
HMGXB4-203ENST00000420166 MAP3K2Q9Y2U5 619 aa26.38■■□□□ 1.81
HMGXB4-203ENST00000420166 PPP1R42Q7Z4L9 355 aa26.37■■□□□ 1.81
HMGXB4-203ENST00000420166 NLRP10Q86W26 655 aa26.37■■□□□ 1.81
HMGXB4-203ENST00000420166 MRPL50Q8N5N7 158 aaKnown RBP26.37■■□□□ 1.81
HMGXB4-203ENST00000420166 METTL22Q9BUU2 404 aaPredicted RBP26.37■■□□□ 1.81
HMGXB4-203ENST00000420166 ATP5J2-PTCD1G3V325 749 aa26.36■■□□□ 1.81
HMGXB4-203ENST00000420166 NTSR2O95665 410 aa26.36■■□□□ 1.81
HMGXB4-203ENST00000420166 BRIP1Q9BX63 1249 aa26.36■■□□□ 1.81
HMGXB4-203ENST00000420166 BRCA1P38398 1863 aaKnown RBP26.35■■□□□ 1.81
HMGXB4-203ENST00000420166 TRIM28Q13263 835 aaKnown RBP26.35■■□□□ 1.81
HMGXB4-203ENST00000420166 MYD88Q99836 296 aa26.35■■□□□ 1.81
HMGXB4-203ENST00000420166 UTP14AQ9BVJ6 771 aaKnown RBP26.35■■□□□ 1.81
HMGXB4-203ENST00000420166 BCL2L13Q9BXK5 485 aa26.35■■□□□ 1.81
HMGXB4-203ENST00000420166 DLEC1Q9Y238 1755 aa26.35■■□□□ 1.81
HMGXB4-203ENST00000420166 ABCC12Q96J65 1359 aa26.34■■□□□ 1.81
HMGXB4-203ENST00000420166 GTF2E1P29083 439 aaPredicted RBP26.34■■□□□ 1.81
HMGXB4-203ENST00000420166 SMC4Q9NTJ3 1288 aa26.34■■□□□ 1.81
HMGXB4-203ENST00000420166 A0A0G2JLW4 131 aa26.33■■□□□ 1.81
HMGXB4-203ENST00000420166 DPEP1P16444 411 aa26.33■■□□□ 1.81
HMGXB4-203ENST00000420166 NUTM1Q86Y26 1132 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms