RNA–Protein interactions for RNA: ENST00000420081.1

LINC00240-201, long intergenic non-protein coding RNA 240, humanhuman

TSL 5

Gene LINC00240, Length 339 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-201ENST00000420081 IFT57Q9NWB7 429 aa5.82□□□□□ -1.48
LINC00240-201ENST00000420081 GTF3C3Q9Y5Q9 886 aa5.82□□□□□ -1.48
LINC00240-201ENST00000420081 AFDNP55196 1824 aaKnown RBP5.82□□□□□ -1.48
LINC00240-201ENST00000420081 THSD7AQ9UPZ6 1657 aa5.82□□□□□ -1.48
LINC00240-201ENST00000420081 KIF16BQ96L93 1317 aa5.81□□□□□ -1.48
LINC00240-201ENST00000420081 SLIT2O94813 1529 aa5.81□□□□□ -1.48
LINC00240-201ENST00000420081 SOWAHBA6NEL2 793 aa5.81□□□□□ -1.48
LINC00240-201ENST00000420081 DPYSL4O14531 572 aa5.81□□□□□ -1.48
LINC00240-201ENST00000420081 HTATSF1O43719 755 aaKnown RBP5.81□□□□□ -1.48
LINC00240-201ENST00000420081 HSP90AB1P08238 724 aaKnown RBP5.81□□□□□ -1.48
LINC00240-201ENST00000420081 CT47B1P0C2W7 299 aaPredicted RBP5.81□□□□□ -1.48
LINC00240-201ENST00000420081 IL2RBP14784 551 aa5.81□□□□□ -1.48
LINC00240-201ENST00000420081 RRP1P56182 461 aaKnown RBP5.81□□□□□ -1.48
LINC00240-201ENST00000420081 CAMK2BQ13554 666 aa5.81□□□□□ -1.48
LINC00240-201ENST00000420081 MTHFSDQ2M296 383 aaKnown RBP5.81□□□□□ -1.48
LINC00240-201ENST00000420081 AKAP4Q5JQC9 854 aa5.81□□□□□ -1.48
LINC00240-201ENST00000420081 DUSP27Q5VZP5 1158 aa5.81□□□□□ -1.48
LINC00240-201ENST00000420081 MCM10Q7L590 875 aa5.81□□□□□ -1.48
LINC00240-201ENST00000420081 TSR2Q969E8 191 aaKnown RBP5.81□□□□□ -1.48
LINC00240-201ENST00000420081 C8orf37Q96NL8 207 aa5.81□□□□□ -1.48
LINC00240-201ENST00000420081 THUMPD2Q9BTF0 503 aaKnown RBP5.81□□□□□ -1.48
LINC00240-201ENST00000420081 CARD10Q9BWT7 1032 aa5.81□□□□□ -1.48
LINC00240-201ENST00000420081 IRX2Q9BZI1 471 aaPredicted RBP5.81□□□□□ -1.48
LINC00240-201ENST00000420081 USP35Q9P2H5 1018 aa5.81□□□□□ -1.48
LINC00240-201ENST00000420081 TSPYL4Q9UJ04 414 aa5.81□□□□□ -1.48
LINC00240-201ENST00000420081 SUPT16HQ9Y5B9 1047 aaKnown RBP5.81□□□□□ -1.48
LINC00240-201ENST00000420081 NHSQ6T4R5 1651 aa5.8□□□□□ -1.48
LINC00240-201ENST00000420081 FAM83GA6ND36 823 aa5.8□□□□□ -1.48
LINC00240-201ENST00000420081 HSPA1LP34931 641 aa5.8□□□□□ -1.48
LINC00240-201ENST00000420081 DCTN1Q14203 1278 aa5.8□□□□□ -1.48
LINC00240-201ENST00000420081 LARP1Q6PKG0 1096 aaKnown RBP5.8□□□□□ -1.48
LINC00240-201ENST00000420081 BBXQ8WY36 941 aaPredicted RBP5.8□□□□□ -1.48
LINC00240-201ENST00000420081 NGLY1Q96IV0 654 aa5.8□□□□□ -1.48
LINC00240-201ENST00000420081 ZFRQ96KR1 1074 aaKnown RBP5.8□□□□□ -1.48
LINC00240-201ENST00000420081 SMC4Q9NTJ3 1288 aa5.8□□□□□ -1.48
LINC00240-201ENST00000420081 KDM6AO15550 1401 aaPredicted RBP5.8□□□□□ -1.48
LINC00240-201ENST00000420081 BTAF1O14981 1849 aa5.79□□□□□ -1.48
LINC00240-201ENST00000420081 BRWD3Q6RI45 1802 aa5.79□□□□□ -1.48
LINC00240-201ENST00000420081 SBF2Q86WG5 1849 aa5.79□□□□□ -1.48
LINC00240-201ENST00000420081 IRX6P78412 446 aaPredicted RBP5.79□□□□□ -1.48
LINC00240-201ENST00000420081 EXOSC9Q06265 439 aaKnown RBP5.79□□□□□ -1.48
LINC00240-201ENST00000420081 FTSJ3Q8IY81 847 aaKnown RBP5.79□□□□□ -1.48
LINC00240-201ENST00000420081 IFNL2Q8IZJ0 200 aa5.79□□□□□ -1.48
LINC00240-201ENST00000420081 DDX12PQ92771 950 aa5.79□□□□□ -1.48
LINC00240-201ENST00000420081 CFAP44Q96MT7 982 aa5.79□□□□□ -1.48
LINC00240-201ENST00000420081 CDCA7Q9BWT1 371 aaPredicted RBP5.79□□□□□ -1.48
LINC00240-201ENST00000420081 MBIPQ9NS73 344 aa5.79□□□□□ -1.48
LINC00240-201ENST00000420081 ARFGEF2Q9Y6D5 1785 aa5.79□□□□□ -1.48
LINC00240-201ENST00000420081 DISP2A7MBM2 1401 aa5.79□□□□□ -1.48
LINC00240-201ENST00000420081 GLI3P10071 1580 aa5.79□□□□□ -1.48
LINC00240-201ENST00000420081 CEMIPQ8WUJ3 1361 aa5.79□□□□□ -1.48
LINC00240-201ENST00000420081 TRIM6-TRIM34B2RNG4 842 aa5.78□□□□□ -1.48
LINC00240-201ENST00000420081 MS4A1P11836 297 aa5.78□□□□□ -1.48
LINC00240-201ENST00000420081 BCAMP50895 628 aa5.78□□□□□ -1.48
LINC00240-201ENST00000420081 FAM98CQ17RN3 349 aaKnown RBP5.78□□□□□ -1.48
LINC00240-201ENST00000420081 TWISTNBQ3B726 338 aaPredicted RBP5.78□□□□□ -1.48
LINC00240-201ENST00000420081 PACS2Q86VP3 889 aa5.78□□□□□ -1.48
LINC00240-201ENST00000420081 TTC5Q8N0Z6 440 aa5.78□□□□□ -1.48
LINC00240-201ENST00000420081 ZCRB1Q8TBF4 217 aaKnown RBP5.78□□□□□ -1.48
LINC00240-201ENST00000420081 FRAT1Q92837 279 aaPredicted RBP5.78□□□□□ -1.48
LINC00240-201ENST00000420081 ZNF428Q96B54 188 aa5.78□□□□□ -1.48
LINC00240-201ENST00000420081 STK31Q9BXU1 1019 aa5.78□□□□□ -1.48
LINC00240-201ENST00000420081 CHMP4AQ9BY43 222 aa5.78□□□□□ -1.48
LINC00240-201ENST00000420081 ANKRD36CQ5JPF3 1778 aa5.78□□□□□ -1.48
LINC00240-201ENST00000420081 CICQ96RK0 1608 aaPredicted RBP5.77□□□□□ -1.48
LINC00240-201ENST00000420081 SOS1Q07889 1333 aaPredicted RBP5.77□□□□□ -1.49
LINC00240-201ENST00000420081 SPATA31A1Q5TZJ5 1347 aa5.77□□□□□ -1.49
LINC00240-201ENST00000420081 TJP1Q07157 1748 aa5.77□□□□□ -1.49
LINC00240-201ENST00000420081 BTBD11A6QL63 1104 aa5.77□□□□□ -1.49
LINC00240-201ENST00000420081 RNMTO43148 476 aaKnown RBP5.77□□□□□ -1.49
LINC00240-201ENST00000420081 ITGBL1O95965 494 aaPredicted RBP5.77□□□□□ -1.49
LINC00240-201ENST00000420081 PHKG2P15735 406 aa5.77□□□□□ -1.49
LINC00240-201ENST00000420081 KCNC4Q03721 635 aa5.77□□□□□ -1.49
LINC00240-201ENST00000420081 MPRIPQ6WCQ1 1025 aa5.77□□□□□ -1.49
LINC00240-201ENST00000420081 UNC5CLQ8IV45 518 aa5.77□□□□□ -1.49
LINC00240-201ENST00000420081 TRMT2AQ8IZ69 625 aaKnown RBP5.77□□□□□ -1.49
LINC00240-201ENST00000420081 LRCH3Q96II8 777 aa5.77□□□□□ -1.49
LINC00240-201ENST00000420081 DCAF5Q96JK2 942 aa5.77□□□□□ -1.49
LINC00240-201ENST00000420081 BCL2L13Q9BXK5 485 aa5.77□□□□□ -1.49
LINC00240-201ENST00000420081 BABAM1Q9NWV8 329 aa5.77□□□□□ -1.49
LINC00240-201ENST00000420081 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.77□□□□□ -1.49
LINC00240-201ENST00000420081 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.77□□□□□ -1.49
LINC00240-201ENST00000420081 SEPT9Q9UHD8 586 aaPredicted RBP5.77□□□□□ -1.49
LINC00240-201ENST00000420081 USP21Q9UK80 565 aa5.77□□□□□ -1.49
LINC00240-201ENST00000420081 THRAP3Q9Y2W1 955 aaKnown RBP5.77□□□□□ -1.49
LINC00240-201ENST00000420081 NUP188Q5SRE5 1749 aa5.77□□□□□ -1.49
LINC00240-201ENST00000420081 AFF2P51816 1311 aa5.76□□□□□ -1.49
LINC00240-201ENST00000420081 SPATA31A5Q5VU36 1347 aa5.76□□□□□ -1.49
LINC00240-201ENST00000420081 SPATA31A7Q8IWB4 1347 aa5.76□□□□□ -1.49
LINC00240-201ENST00000420081 IPO8O15397 1037 aaKnown RBP5.76□□□□□ -1.49
LINC00240-201ENST00000420081 MAP3K7O43318 606 aa5.76□□□□□ -1.49
LINC00240-201ENST00000420081 CABP4P57796 275 aa5.76□□□□□ -1.49
LINC00240-201ENST00000420081 NBR1Q14596 966 aa5.76□□□□□ -1.49
LINC00240-201ENST00000420081 TAF7Q15545 349 aaPredicted RBP5.76□□□□□ -1.49
LINC00240-201ENST00000420081 DDB1Q16531 1140 aa5.76□□□□□ -1.49
LINC00240-201ENST00000420081 ALDH1L2Q3SY69 923 aa5.76□□□□□ -1.49
LINC00240-201ENST00000420081 ERICH6BQ5W0A0 696 aa5.76□□□□□ -1.49
LINC00240-201ENST00000420081 SPRYD3Q8NCJ5 442 aa5.76□□□□□ -1.49
LINC00240-201ENST00000420081 DDX54Q8TDD1 881 aaKnown RBP5.76□□□□□ -1.49
LINC00240-201ENST00000420081 TMOD3Q9NYL9 352 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms