RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 ANXA1P04083 346 aa22.81■■□□□ 1.24
EPCAM-203ENST00000419334 ZNF652Q9Y2D9 606 aa22.81■■□□□ 1.24
EPCAM-203ENST00000419334 ERVV-1B6SEH8 477 aa22.8■■□□□ 1.24
EPCAM-203ENST00000419334 POLRMTO00411 1230 aaKnown RBP22.8■■□□□ 1.24
EPCAM-203ENST00000419334 TWISTNBQ3B726 338 aaPredicted RBP22.8■■□□□ 1.24
EPCAM-203ENST00000419334 KIF6Q6ZMV9 814 aa22.8■■□□□ 1.24
EPCAM-203ENST00000419334 TTLL7Q6ZT98 887 aa22.8■■□□□ 1.24
EPCAM-203ENST00000419334 MAP3K15Q6ZN16 1313 aa22.8■■□□□ 1.24
EPCAM-203ENST00000419334 TBC1D9BQ66K14 1250 aa22.79■■□□□ 1.24
EPCAM-203ENST00000419334 CD2APQ9Y5K6 639 aa22.79■■□□□ 1.24
EPCAM-203ENST00000419334 CCDC30Q5VVM6 783 aa22.78■■□□□ 1.24
EPCAM-203ENST00000419334 C10orf71Q711Q0 1435 aa22.78■■□□□ 1.24
EPCAM-203ENST00000419334 KLHL34Q8N239 644 aa22.78■■□□□ 1.24
EPCAM-203ENST00000419334 CACNA1FO60840 1977 aa22.78■■□□□ 1.24
EPCAM-203ENST00000419334 E9PSI1 815 aa22.77■■□□□ 1.24
EPCAM-203ENST00000419334 EXOSC9Q06265 439 aaKnown RBP22.77■■□□□ 1.24
EPCAM-203ENST00000419334 HYPKQ9NX55 129 aa22.77■■□□□ 1.24
EPCAM-203ENST00000419334 CARMIL3Q8ND23 1372 aa22.76■■□□□ 1.23
EPCAM-203ENST00000419334 HLFQ16534 295 aa22.76■■□□□ 1.23
EPCAM-203ENST00000419334 BICDL1Q6ZP65 573 aa22.76■■□□□ 1.23
EPCAM-203ENST00000419334 COPS6Q7L5N1 327 aa22.76■■□□□ 1.23
EPCAM-203ENST00000419334 XAGE3Q8WTP9 111 aa22.76■■□□□ 1.23
EPCAM-203ENST00000419334 SLFN5Q08AF3 891 aa22.75■■□□□ 1.23
EPCAM-203ENST00000419334 SETDB2Q96T68 719 aa22.75■■□□□ 1.23
EPCAM-203ENST00000419334 ZBTB3Q9H5J0 574 aa22.75■■□□□ 1.23
EPCAM-203ENST00000419334 ANKRD36CQ5JPF3 1778 aa22.75■■□□□ 1.23
EPCAM-203ENST00000419334 ATP10DQ9P241 1426 aa22.74■■□□□ 1.23
EPCAM-203ENST00000419334 KIAA1551Q9HCM1 1747 aa22.74■■□□□ 1.23
EPCAM-203ENST00000419334 VAMP4O75379 141 aa22.74■■□□□ 1.23
EPCAM-203ENST00000419334 SERPINB2P05120 415 aa22.74■■□□□ 1.23
EPCAM-203ENST00000419334 AIMP1Q12904 312 aaKnown RBP22.73■■□□□ 1.23
EPCAM-203ENST00000419334 GIGYF2Q6Y7W6 1299 aaKnown RBP22.73■■□□□ 1.23
EPCAM-203ENST00000419334 NLGN2Q8NFZ4 835 aa22.73■■□□□ 1.23
EPCAM-203ENST00000419334 HNRNPUQ00839 825 aaKnown RBP eCLIP22.72■■□□□ 1.23
EPCAM-203ENST00000419334 CDCA7LQ96GN5 454 aa22.72■■□□□ 1.23
EPCAM-203ENST00000419334 STK31Q9BXU1 1019 aa22.72■■□□□ 1.23
EPCAM-203ENST00000419334 NIP7Q9Y221 180 aaKnown RBP eCLIP22.72■■□□□ 1.23
EPCAM-203ENST00000419334 ARFGEF2Q9Y6D5 1785 aa22.71■■□□□ 1.23
EPCAM-203ENST00000419334 TRMT2AQ8IZ69 625 aaKnown RBP22.71■■□□□ 1.23
EPCAM-203ENST00000419334 PLBD2Q8NHP8 589 aa22.7■■□□□ 1.22
EPCAM-203ENST00000419334 PHAXQ9H814 394 aaKnown RBP22.7■■□□□ 1.22
EPCAM-203ENST00000419334 N4BP2Q86UW6 1770 aaPredicted RBP22.7■■□□□ 1.22
EPCAM-203ENST00000419334 ANKRD31Q8N7Z5 1873 aa22.69■■□□□ 1.22
EPCAM-203ENST00000419334 PXDNLA1KZ92 1463 aa22.69■■□□□ 1.22
EPCAM-203ENST00000419334 TGFB2P61812 414 aa22.69■■□□□ 1.22
EPCAM-203ENST00000419334 ANKRD13DQ6ZTN6 518 aa22.69■■□□□ 1.22
EPCAM-203ENST00000419334 HSP90AB3PQ58FF7 597 aa22.68■■□□□ 1.22
EPCAM-203ENST00000419334 PRR5LQ6MZQ0 368 aa22.68■■□□□ 1.22
EPCAM-203ENST00000419334 ZNF34Q8IZ26 560 aa22.68■■□□□ 1.22
EPCAM-203ENST00000419334 BRCA1P38398 1863 aaKnown RBP22.67■■□□□ 1.22
EPCAM-203ENST00000419334 TCERG1O14776 1098 aaKnown RBP22.67■■□□□ 1.22
EPCAM-203ENST00000419334 NBPF5PQ86XG9 351 aaPredicted RBP22.67■■□□□ 1.22
EPCAM-203ENST00000419334 CNBD1Q8NA66 436 aa22.67■■□□□ 1.22
EPCAM-203ENST00000419334 IBTKQ9P2D0 1353 aaPredicted RBP22.66■■□□□ 1.22
EPCAM-203ENST00000419334 UBN2Q6ZU65 1347 aa22.66■■□□□ 1.22
EPCAM-203ENST00000419334 SLC4A2P04920 1241 aa22.66■■□□□ 1.22
EPCAM-203ENST00000419334 GPTP24298 496 aa22.65■■□□□ 1.22
EPCAM-203ENST00000419334 TCIRG1Q13488 830 aa22.65■■□□□ 1.22
EPCAM-203ENST00000419334 TPTE2Q6XPS3 522 aa22.65■■□□□ 1.22
EPCAM-203ENST00000419334 DLEC1Q9Y238 1755 aa22.65■■□□□ 1.22
EPCAM-203ENST00000419334 ZBED9Q6R2W3 1325 aa22.64■■□□□ 1.22
EPCAM-203ENST00000419334 NPHP1O15259 732 aa22.64■■□□□ 1.21
EPCAM-203ENST00000419334 DDX58O95786 925 aaKnown RBP22.64■■□□□ 1.21
EPCAM-203ENST00000419334 ST5P78524 1137 aa22.64■■□□□ 1.21
EPCAM-203ENST00000419334 PARP10Q53GL7 1025 aa22.64■■□□□ 1.21
EPCAM-203ENST00000419334 NYXQ9GZU5 481 aa22.64■■□□□ 1.21
EPCAM-203ENST00000419334 RIC3Q7Z5B4 369 aa22.63■■□□□ 1.21
EPCAM-203ENST00000419334 BRIP1Q9BX63 1249 aa22.63■■□□□ 1.21
EPCAM-203ENST00000419334 DPEP1P16444 411 aa22.62■■□□□ 1.21
EPCAM-203ENST00000419334 G2E3Q7L622 706 aa22.62■■□□□ 1.21
EPCAM-203ENST00000419334 ZNF428Q96B54 188 aa22.62■■□□□ 1.21
EPCAM-203ENST00000419334 A0A0G2JLW4 131 aa22.61■■□□□ 1.21
EPCAM-203ENST00000419334 DCAF8L1A6NGE4 600 aa22.61■■□□□ 1.21
EPCAM-203ENST00000419334 FAM177BA6PVY3 158 aa22.61■■□□□ 1.21
EPCAM-203ENST00000419334 CT47B1P0C2W7 299 aaPredicted RBP22.61■■□□□ 1.21
EPCAM-203ENST00000419334 FLIIQ13045 1269 aa22.61■■□□□ 1.21
EPCAM-203ENST00000419334 SUSD4Q5VX71 490 aa22.61■■□□□ 1.21
EPCAM-203ENST00000419334 PPP1R42Q7Z4L9 355 aa22.61■■□□□ 1.21
EPCAM-203ENST00000419334 PDZRN3Q9UPQ7 1066 aa22.61■■□□□ 1.21
EPCAM-203ENST00000419334 COL11A2P13942 1736 aaPredicted RBP22.6■■□□□ 1.21
EPCAM-203ENST00000419334 NTSR2O95665 410 aa22.6■■□□□ 1.21
EPCAM-203ENST00000419334 KCNA3P22001 575 aa22.6■■□□□ 1.21
EPCAM-203ENST00000419334 PDE6BP35913 854 aa22.6■■□□□ 1.21
EPCAM-203ENST00000419334 KSR2Q6VAB6 950 aa22.6■■□□□ 1.21
EPCAM-203ENST00000419334 NLRP10Q86W26 655 aa22.6■■□□□ 1.21
EPCAM-203ENST00000419334 CCDC24Q8N4L8 307 aa22.6■■□□□ 1.21
EPCAM-203ENST00000419334 ISCA1Q9BUE6 129 aa22.6■■□□□ 1.21
EPCAM-203ENST00000419334 RNF123Q5XPI4 1314 aa22.59■■□□□ 1.21
EPCAM-203ENST00000419334 RIC1Q4ADV7 1423 aa22.59■■□□□ 1.21
EPCAM-203ENST00000419334 GTF2E1P29083 439 aaPredicted RBP22.59■■□□□ 1.21
EPCAM-203ENST00000419334 CHRNA5P30532 468 aa22.59■■□□□ 1.21
EPCAM-203ENST00000419334 ADCY9O60503 1353 aa22.59■■□□□ 1.21
EPCAM-203ENST00000419334 PI4KAP2A4QPH2 592 aa22.58■■□□□ 1.21
EPCAM-203ENST00000419334 TRIM28Q13263 835 aaKnown RBP22.58■■□□□ 1.21
EPCAM-203ENST00000419334 PI4KAP1Q8N8J0 262 aa22.58■■□□□ 1.21
EPCAM-203ENST00000419334 METTL22Q9BUU2 404 aaPredicted RBP22.58■■□□□ 1.21
EPCAM-203ENST00000419334 UTP14AQ9BVJ6 771 aaKnown RBP22.58■■□□□ 1.21
EPCAM-203ENST00000419334 MAP3K2Q9Y2U5 619 aa22.58■■□□□ 1.21
EPCAM-203ENST00000419334 ARFGEF1Q9Y6D6 1849 aa22.57■■□□□ 1.2
EPCAM-203ENST00000419334 FKBP5Q13451 457 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms