RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 USP16Q9Y5T5 823 aa13.81□□□□□ -0.2
DDR1-232ENST00000418800 IRX3P78415 501 aaPredicted RBP13.8□□□□□ -0.2
DDR1-232ENST00000418800 EIF4A2Q14240 407 aaKnown RBP13.8□□□□□ -0.2
DDR1-232ENST00000418800 TAF7Q15545 349 aaPredicted RBP13.8□□□□□ -0.2
DDR1-232ENST00000418800 BOLA2Q9H3K6 86 aa13.8□□□□□ -0.2
DDR1-232ENST00000418800 KIDINS220Q9ULH0 1771 aa13.8□□□□□ -0.2
DDR1-232ENST00000418800 RUFY3Q7L099 469 aa13.8□□□□□ -0.2
DDR1-232ENST00000418800 PHAXQ9H814 394 aaKnown RBP13.8□□□□□ -0.2
DDR1-232ENST00000418800 PA2G4Q9UQ80 394 aaKnown RBP13.8□□□□□ -0.2
DDR1-232ENST00000418800 NRDCO43847 1150 aa13.79□□□□□ -0.2
DDR1-232ENST00000418800 ADCK5Q3MIX3 580 aa13.79□□□□□ -0.2
DDR1-232ENST00000418800 ZNF397Q8NF99 534 aaPredicted RBP13.79□□□□□ -0.2
DDR1-232ENST00000418800 KIF18AQ8NI77 898 aa13.79□□□□□ -0.2
DDR1-232ENST00000418800 BIN1O00499 593 aa13.79□□□□□ -0.2
DDR1-232ENST00000418800 ERCC6LQ2NKX8 1250 aa13.79□□□□□ -0.2
DDR1-232ENST00000418800 AACSQ86V21 672 aa13.79□□□□□ -0.2
DDR1-232ENST00000418800 RHPN1Q8TCX5 695 aa13.78□□□□□ -0.2
DDR1-232ENST00000418800 CCDC34Q96HJ3 373 aa13.78□□□□□ -0.2
DDR1-232ENST00000418800 SPTLC3Q9NUV7 552 aa13.78□□□□□ -0.2
DDR1-232ENST00000418800 CLTCL1P53675 1640 aa13.78□□□□□ -0.2
DDR1-232ENST00000418800 CBX8Q9HC52 389 aa13.78□□□□□ -0.2
DDR1-232ENST00000418800 DDX41Q9UJV9 622 aaKnown RBP13.78□□□□□ -0.2
DDR1-232ENST00000418800 IQSEC2Q5JU85 1478 aa13.78□□□□□ -0.2
DDR1-232ENST00000418800 RICTORQ6R327 1708 aa13.78□□□□□ -0.2
DDR1-232ENST00000418800 SLFN14P0C7P3 912 aa13.78□□□□□ -0.2
DDR1-232ENST00000418800 CDC37L1Q7L3B6 337 aa13.78□□□□□ -0.2
DDR1-232ENST00000418800 CACTINQ8WUQ7 758 aaKnown RBP13.78□□□□□ -0.2
DDR1-232ENST00000418800 GPATCH3Q96I76 525 aa13.78□□□□□ -0.2
DDR1-232ENST00000418800 PAXBP1Q9Y5B6 917 aa13.78□□□□□ -0.2
DDR1-232ENST00000418800 NPATQ14207 1427 aa13.78□□□□□ -0.2
DDR1-232ENST00000418800 CUL4AQ13619 759 aa13.77□□□□□ -0.2
DDR1-232ENST00000418800 KMT5BQ4FZB7 885 aa13.77□□□□□ -0.2
DDR1-232ENST00000418800 ZSCAN25Q6NSZ9 544 aa13.77□□□□□ -0.2
DDR1-232ENST00000418800 FBXO38Q6PIJ6 1188 aa13.77□□□□□ -0.2
DDR1-232ENST00000418800 BLOC1S2Q6QNY1 142 aa13.77□□□□□ -0.2
DDR1-232ENST00000418800 RPGRIP1LQ68CZ1 1315 aa13.77□□□□□ -0.2
DDR1-232ENST00000418800 HNRNPH2P55795 449 aaKnown RBP13.77□□□□□ -0.21
DDR1-232ENST00000418800 ATP8B2P98198 1209 aa13.77□□□□□ -0.21
DDR1-232ENST00000418800 TTC6Q86TZ1 520 aa13.77□□□□□ -0.21
DDR1-232ENST00000418800 GPATCH11Q8N954 259 aa13.77□□□□□ -0.21
DDR1-232ENST00000418800 ANKRD7Q92527 254 aa13.77□□□□□ -0.21
DDR1-232ENST00000418800 FRMPD1Q5SYB0 1578 aa13.77□□□□□ -0.21
DDR1-232ENST00000418800 ME1P48163 572 aa13.77□□□□□ -0.21
DDR1-232ENST00000418800 PTH1RQ03431 593 aa13.77□□□□□ -0.21
DDR1-232ENST00000418800 MTHFSDQ2M296 383 aaKnown RBP13.77□□□□□ -0.21
DDR1-232ENST00000418800 UBXN4Q92575 508 aa13.77□□□□□ -0.21
DDR1-232ENST00000418800 ZSWIM4Q9H7M6 989 aa13.77□□□□□ -0.21
DDR1-232ENST00000418800 RSPH14Q9UHP6 348 aa13.77□□□□□ -0.21
DDR1-232ENST00000418800 PTPRCP08575 1304 aa13.77□□□□□ -0.21
DDR1-232ENST00000418800 ANAPC15P60006 121 aa13.76□□□□□ -0.21
DDR1-232ENST00000418800 ARHGAP29Q52LW3 1261 aa13.76□□□□□ -0.21
DDR1-232ENST00000418800 HSP90AA4PQ58FG1 418 aa13.76□□□□□ -0.21
DDR1-232ENST00000418800 CCDC73Q6ZRK6 1079 aa13.76□□□□□ -0.21
DDR1-232ENST00000418800 USP27XA6NNY8 438 aa13.76□□□□□ -0.21
DDR1-232ENST00000418800 DNAJC5Q9H3Z4 198 aa13.76□□□□□ -0.21
DDR1-232ENST00000418800 NDUFB9Q9Y6M9 179 aa13.76□□□□□ -0.21
DDR1-232ENST00000418800 VIRMAQ69YN4 1812 aaKnown RBP13.76□□□□□ -0.21
DDR1-232ENST00000418800 UNC13BO14795 1591 aa13.76□□□□□ -0.21
DDR1-232ENST00000418800 RIMS2Q9UQ26 1411 aa13.76□□□□□ -0.21
DDR1-232ENST00000418800 URI1O94763 535 aaPredicted RBP13.76□□□□□ -0.21
DDR1-232ENST00000418800 GPS2Q13227 327 aa13.76□□□□□ -0.21
DDR1-232ENST00000418800 TMCO3Q6UWJ1 677 aa13.76□□□□□ -0.21
DDR1-232ENST00000418800 SYT10Q6XYQ8 523 aa13.76□□□□□ -0.21
DDR1-232ENST00000418800 CREBRFQ8IUR6 639 aa13.76□□□□□ -0.21
DDR1-232ENST00000418800 CCDC61Q9Y6R9 512 aa13.76□□□□□ -0.21
DDR1-232ENST00000418800 ZNF853P0CG23 659 aa13.75□□□□□ -0.21
DDR1-232ENST00000418800 HECW2Q9P2P5 1572 aa13.75□□□□□ -0.21
DDR1-232ENST00000418800 CHL1O00533 1208 aa13.75□□□□□ -0.21
DDR1-232ENST00000418800 LMAN1P49257 510 aa13.75□□□□□ -0.21
DDR1-232ENST00000418800 CCT2P78371 535 aaKnown RBP13.75□□□□□ -0.21
DDR1-232ENST00000418800 TEFQ10587 303 aa13.75□□□□□ -0.21
DDR1-232ENST00000418800 LARP1Q6PKG0 1096 aaKnown RBP13.75□□□□□ -0.21
DDR1-232ENST00000418800 KRBA2Q6ZNG9 492 aa13.75□□□□□ -0.21
DDR1-232ENST00000418800 RAB11FIP4Q86YS3 637 aa13.75□□□□□ -0.21
DDR1-232ENST00000418800 ARGLU1Q9NWB6 273 aaPredicted RBP13.75□□□□□ -0.21
DDR1-232ENST00000418800 PI4KAP2A4QPH2 592 aa13.75□□□□□ -0.21
DDR1-232ENST00000418800 KINO60870 393 aaKnown RBP13.75□□□□□ -0.21
DDR1-232ENST00000418800 HSPA4P34932 840 aa13.75□□□□□ -0.21
DDR1-232ENST00000418800 ME3Q16798 604 aa13.75□□□□□ -0.21
DDR1-232ENST00000418800 PI4KAP1Q8N8J0 262 aa13.75□□□□□ -0.21
DDR1-232ENST00000418800 MTMR6Q9Y217 621 aa13.75□□□□□ -0.21
DDR1-232ENST00000418800 CCDC69A6NI79 296 aa13.74□□□□□ -0.21
DDR1-232ENST00000418800 G3BP1Q13283 466 aaKnown RBP eCLIP13.74□□□□□ -0.21
DDR1-232ENST00000418800 BMS1Q14692 1282 aaKnown RBP13.74□□□□□ -0.21
DDR1-232ENST00000418800 TAF7LQ5H9L4 462 aa13.74□□□□□ -0.21
DDR1-232ENST00000418800 IQGAP3Q86VI3 1631 aa13.74□□□□□ -0.21
DDR1-232ENST00000418800 SLU7O95391 586 aaKnown RBP13.74□□□□□ -0.21
DDR1-232ENST00000418800 NBPF7P0C2Y1 421 aaPredicted RBP13.74□□□□□ -0.21
DDR1-232ENST00000418800 NLRP6P59044 892 aa13.74□□□□□ -0.21
DDR1-232ENST00000418800 KIF1BPQ96EK5 621 aa13.74□□□□□ -0.21
DDR1-232ENST00000418800 FAM227BQ96M60 508 aa13.74□□□□□ -0.21
DDR1-232ENST00000418800 RBM8AQ9Y5S9 174 aaKnown RBP13.74□□□□□ -0.21
DDR1-232ENST00000418800 ABCA6Q8N139 1617 aa13.74□□□□□ -0.21
DDR1-232ENST00000418800 NR1I2O75469 434 aa13.73□□□□□ -0.21
DDR1-232ENST00000418800 PDCP20941 246 aa13.73□□□□□ -0.21
DDR1-232ENST00000418800 PTPN21Q16825 1174 aa13.73□□□□□ -0.21
DDR1-232ENST00000418800 CCDC191Q8NCU4 936 aa13.73□□□□□ -0.21
DDR1-232ENST00000418800 ZCCHC17Q9NP64 241 aaKnown RBP13.73□□□□□ -0.21
DDR1-232ENST00000418800 SBNO2Q9Y2G9 1366 aa13.73□□□□□ -0.21
DDR1-232ENST00000418800 SGSM2O43147 1006 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms