RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 AEBP1Q8IUX7 1158 aa9.51□□□□□ -0.89
HMGXB4-202ENST00000418170 IL25Q9H293 177 aa9.51□□□□□ -0.89
HMGXB4-202ENST00000418170 STAP2Q9UGK3 403 aa9.51□□□□□ -0.89
HMGXB4-202ENST00000418170 FHOD1Q9Y613 1164 aa9.51□□□□□ -0.89
HMGXB4-202ENST00000418170 CPS1P31327 1500 aa9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 DLC1Q96QB1 1528 aa9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 LIG1P18858 919 aa9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 CAMK4Q16566 473 aa9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 TRERF1Q96PN7 1200 aa9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 LRRCC1Q9C099 1032 aa9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 TNMDQ9H2S6 317 aa9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 POLKQ9UBT6 870 aa9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 GGT6Q6P531 493 aa9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 TTC6Q86TZ1 520 aa9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 EFCC1Q9HA90 598 aa9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 EXOC6BQ9Y2D4 811 aa9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 SNX14Q9Y5W7 946 aa9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 RIMS1Q86UR5 1692 aaKnown RBP9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 HTATSF1O43719 755 aaKnown RBP9.5□□□□□ -0.89
HMGXB4-202ENST00000418170 GJB2P29033 226 aa9.49□□□□□ -0.89
HMGXB4-202ENST00000418170 MUM1L1Q5H9M0 696 aa9.49□□□□□ -0.89
HMGXB4-202ENST00000418170 UNC5CLQ8IV45 518 aa9.49□□□□□ -0.89
HMGXB4-202ENST00000418170 KCND1Q9NSA2 647 aa9.49□□□□□ -0.89
HMGXB4-202ENST00000418170 CKAP2LQ8IYA6 745 aa9.49□□□□□ -0.89
HMGXB4-202ENST00000418170 GTF3C6Q969F1 213 aa9.49□□□□□ -0.89
HMGXB4-202ENST00000418170 AATKQ6ZMQ8 1374 aa9.49□□□□□ -0.89
HMGXB4-202ENST00000418170 XRN1Q8IZH2 1706 aaKnown RBP9.49□□□□□ -0.89
HMGXB4-202ENST00000418170 KIF2AO00139 706 aaPredicted RBP9.49□□□□□ -0.89
HMGXB4-202ENST00000418170 ZNF165P49910 485 aa9.49□□□□□ -0.89
HMGXB4-202ENST00000418170 KRT85P78386 507 aa9.49□□□□□ -0.89
HMGXB4-202ENST00000418170 FAM83GA6ND36 823 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 PNMA6AP0CW24 399 aaPredicted RBP9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 SAFB2Q14151 953 aaKnown RBP eCLIP9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 SARM1Q6SZW1 724 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 DDX19AQ9NUU7 478 aaKnown RBP9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 AOX1Q06278 1338 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 CAVIN2O95810 425 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 SKILP12757 684 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 LARP6Q9BRS8 491 aaKnown RBP9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 L2HGDHQ9H9P8 463 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 DACT1Q9NYF0 836 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 LARGE1O95461 756 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 PLA2G4AP47712 749 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 CCAR2Q8N163 923 aaKnown RBP9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 MRFAP1L1Q96HT8 127 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 CHMP3Q9Y3E7 222 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 TTC21AQ8NDW8 1320 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 VPS37CA5D8V6 355 aaPredicted RBP9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 IL13P35225 146 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 CLCN6P51797 869 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 HDGFL2Q7Z4V5 671 aaPredicted RBP9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 TXLNBQ8N3L3 684 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 CLSTN2Q9H4D0 955 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 HYPKQ9NX55 129 aa9.48□□□□□ -0.89
HMGXB4-202ENST00000418170 NALCNQ8IZF0 1738 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 CCZ1BP86790 482 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 CCZ1P86791 482 aaPredicted RBP9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 ARID5BQ14865 1188 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 TEX35Q5T0J7 233 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 CCDC83Q8IWF9 413 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 RASEFQ8IZ41 740 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 TTC21BQ7Z4L5 1316 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 SLIT1O75093 1534 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 ERCC6LQ2NKX8 1250 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 RGS22Q8NE09 1264 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 ARHGAP23Q9P227 1491 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 SGSM2O43147 1006 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 DCTN1Q14203 1278 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 DNAJC25Q9H1X3 360 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 RASSF4Q9H2L5 321 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 YY1AP1Q9H869 796 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 SH2B1Q9NRF2 756 aaPredicted RBP9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 NPHP3Q7Z494 1330 aa9.47□□□□□ -0.89
HMGXB4-202ENST00000418170 ZRANB2O95218 330 aaKnown RBP eCLIP9.46□□□□□ -0.89
HMGXB4-202ENST00000418170 GNAI2P04899 355 aa9.46□□□□□ -0.89
HMGXB4-202ENST00000418170 FBLN1P23142 703 aa9.46□□□□□ -0.89
HMGXB4-202ENST00000418170 CCT4P50991 539 aaKnown RBP9.46□□□□□ -0.89
HMGXB4-202ENST00000418170 TPM4P67936 248 aa9.46□□□□□ -0.89
HMGXB4-202ENST00000418170 CERS3Q8IU89 383 aa9.46□□□□□ -0.89
HMGXB4-202ENST00000418170 NFATC2IPQ8NCF5 419 aa9.46□□□□□ -0.89
HMGXB4-202ENST00000418170 LSG1Q9H089 658 aaKnown RBP9.46□□□□□ -0.89
HMGXB4-202ENST00000418170 YTHDC2Q9H6S0 1430 aaKnown RBP9.46□□□□□ -0.9
HMGXB4-202ENST00000418170 CCDC69A6NI79 296 aa9.46□□□□□ -0.9
HMGXB4-202ENST00000418170 NPHP1O15259 732 aa9.46□□□□□ -0.9
HMGXB4-202ENST00000418170 TNNT3P45378 269 aaPredicted RBP9.46□□□□□ -0.9
HMGXB4-202ENST00000418170 NEK11Q8NG66 645 aa9.46□□□□□ -0.9
HMGXB4-202ENST00000418170 ZSCAN31Q96LW9 406 aaPredicted RBP9.46□□□□□ -0.9
HMGXB4-202ENST00000418170 TRMT1Q9NXH9 659 aaKnown RBP9.46□□□□□ -0.9
HMGXB4-202ENST00000418170 RSPH14Q9UHP6 348 aa9.46□□□□□ -0.9
HMGXB4-202ENST00000418170 CHD2O14647 1828 aaKnown RBP9.46□□□□□ -0.9
HMGXB4-202ENST00000418170 IQCB1Q15051 598 aa9.45□□□□□ -0.9
HMGXB4-202ENST00000418170 CCDC93Q567U6 631 aa9.45□□□□□ -0.9
HMGXB4-202ENST00000418170 SCAND2PQ9GZW5 306 aaPredicted RBP9.45□□□□□ -0.9
HMGXB4-202ENST00000418170 ADAMTS13Q76LX8 1427 aa9.45□□□□□ -0.9
HMGXB4-202ENST00000418170 CASTP20810 708 aaKnown RBP9.45□□□□□ -0.9
HMGXB4-202ENST00000418170 VPS53Q5VIR6 699 aa9.45□□□□□ -0.9
HMGXB4-202ENST00000418170 TEX2Q8IWB9 1127 aa9.45□□□□□ -0.9
HMGXB4-202ENST00000418170 CHL1O00533 1208 aa9.45□□□□□ -0.9
HMGXB4-202ENST00000418170 ST3GAL1Q11201 340 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms