RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 SRGAP3O43295 1099 aa16.91■□□□□ 0.3
LINC00940-201ENST00000418006 NASPP49321 788 aaPredicted RBP16.91■□□□□ 0.3
LINC00940-201ENST00000418006 A0A0G2JS52 829 aa16.9■□□□□ 0.3
LINC00940-201ENST00000418006 GSPT1P15170 499 aaKnown RBP16.9■□□□□ 0.3
LINC00940-201ENST00000418006 TSHZ3Q63HK5 1081 aa16.9■□□□□ 0.3
LINC00940-201ENST00000418006 SYTL4Q96C24 671 aaPredicted RBP16.89■□□□□ 0.3
LINC00940-201ENST00000418006 KAT6BQ8WYB5 2073 aa16.89■□□□□ 0.29
LINC00940-201ENST00000418006 MYD88Q99836 296 aa16.89■□□□□ 0.29
LINC00940-201ENST00000418006 TMOD3Q9NYL9 352 aa16.89■□□□□ 0.29
LINC00940-201ENST00000418006 MRC1P22897 1456 aa16.89■□□□□ 0.29
LINC00940-201ENST00000418006 TOM1O60784 492 aa16.88■□□□□ 0.29
LINC00940-201ENST00000418006 SURF6O75683 361 aaKnown RBP16.88■□□□□ 0.29
LINC00940-201ENST00000418006 JARID2Q92833 1246 aaPredicted RBP16.88■□□□□ 0.29
LINC00940-201ENST00000418006 LRRCC1Q9C099 1032 aa16.88■□□□□ 0.29
LINC00940-201ENST00000418006 PLEKHG2Q9H7P9 1386 aa16.88■□□□□ 0.29
LINC00940-201ENST00000418006 NKX1-1Q15270 411 aaPredicted RBP16.88■□□□□ 0.29
LINC00940-201ENST00000418006 ANKRD13DQ6ZTN6 518 aa16.88■□□□□ 0.29
LINC00940-201ENST00000418006 IL1RAPL2Q9NP60 686 aa16.88■□□□□ 0.29
LINC00940-201ENST00000418006 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
LINC00940-201ENST00000418006 ZNF330Q9Y3S2 320 aaPredicted RBP16.88■□□□□ 0.29
LINC00940-201ENST00000418006 CCDC9Q9Y3X0 531 aaKnown RBP16.88■□□□□ 0.29
LINC00940-201ENST00000418006 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.87■□□□□ 0.29
LINC00940-201ENST00000418006 AHDC1Q5TGY3 1603 aaPredicted RBP16.87■□□□□ 0.29
LINC00940-201ENST00000418006 UBAP1LF5GYI3 381 aa16.87■□□□□ 0.29
LINC00940-201ENST00000418006 A1BGP04217 495 aa16.87■□□□□ 0.29
LINC00940-201ENST00000418006 MSNP26038 577 aaKnown RBP16.87■□□□□ 0.29
LINC00940-201ENST00000418006 NEXNQ0ZGT2 675 aa16.87■□□□□ 0.29
LINC00940-201ENST00000418006 TTC22Q5TAA0 569 aa16.87■□□□□ 0.29
LINC00940-201ENST00000418006 ANP32BQ92688 251 aaKnown RBP16.87■□□□□ 0.29
LINC00940-201ENST00000418006 KIF2CQ99661 725 aa16.87■□□□□ 0.29
LINC00940-201ENST00000418006 IGKV5-2P06315 115 aa16.86■□□□□ 0.29
LINC00940-201ENST00000418006 RBM10P98175 930 aaKnown RBP16.86■□□□□ 0.29
LINC00940-201ENST00000418006 TBC1D9Q6ZT07 1266 aa16.86■□□□□ 0.29
LINC00940-201ENST00000418006 LINS1Q8NG48 757 aa16.86■□□□□ 0.29
LINC00940-201ENST00000418006 ASAP1Q9ULH1 1129 aa16.86■□□□□ 0.29
LINC00940-201ENST00000418006 ATP5J2-PTCD1G3V325 749 aa16.86■□□□□ 0.29
LINC00940-201ENST00000418006 ALDH1L1O75891 902 aa16.86■□□□□ 0.29
LINC00940-201ENST00000418006 CD2BP2O95400 341 aaKnown RBP16.86■□□□□ 0.29
LINC00940-201ENST00000418006 TERF1P54274 439 aa16.86■□□□□ 0.29
LINC00940-201ENST00000418006 PHLPP1O60346 1717 aa16.85■□□□□ 0.29
LINC00940-201ENST00000418006 GRM8O00222 908 aa16.85■□□□□ 0.29
LINC00940-201ENST00000418006 EXOC5O00471 708 aa16.85■□□□□ 0.29
LINC00940-201ENST00000418006 SSFA2P28290 1259 aa16.85■□□□□ 0.29
LINC00940-201ENST00000418006 SSH3Q8TE77 659 aa16.85■□□□□ 0.29
LINC00940-201ENST00000418006 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
LINC00940-201ENST00000418006 IBTKQ9P2D0 1353 aaPredicted RBP16.85■□□□□ 0.29
LINC00940-201ENST00000418006 PIGBQ92521 554 aa16.85■□□□□ 0.29
LINC00940-201ENST00000418006 NBPF26B4DH59 902 aa16.84■□□□□ 0.29
LINC00940-201ENST00000418006 OS9Q13438 667 aaPredicted RBP16.84■□□□□ 0.29
LINC00940-201ENST00000418006 NBPF14Q5TI25 921 aa16.84■□□□□ 0.29
LINC00940-201ENST00000418006 NBPF10Q6P3W6 841 aaKnown RBP16.84■□□□□ 0.29
LINC00940-201ENST00000418006 LRP10Q7Z4F1 713 aa16.84■□□□□ 0.29
LINC00940-201ENST00000418006 NBPF15Q8N660 670 aa16.84■□□□□ 0.29
LINC00940-201ENST00000418006 COL14A1Q05707 1796 aaKnown RBP16.84■□□□□ 0.29
LINC00940-201ENST00000418006 GOLGA6L22H0YM25 854 aa16.84■□□□□ 0.29
LINC00940-201ENST00000418006 KLHL40Q2TBA0 621 aa16.84■□□□□ 0.29
LINC00940-201ENST00000418006 SUCLG2Q96I99 432 aa16.84■□□□□ 0.29
LINC00940-201ENST00000418006 SHANK3Q9BYB0 1731 aa16.83■□□□□ 0.29
LINC00940-201ENST00000418006 COL16A1Q07092 1604 aaPredicted RBP16.83■□□□□ 0.29
LINC00940-201ENST00000418006 NEURL1BA8MQ27 555 aa16.83■□□□□ 0.28
LINC00940-201ENST00000418006 K7ELQ4 463 aaPredicted RBP16.83■□□□□ 0.28
LINC00940-201ENST00000418006 NUTM1Q86Y26 1132 aa16.83■□□□□ 0.28
LINC00940-201ENST00000418006 METTL22Q9BUU2 404 aaPredicted RBP16.83■□□□□ 0.28
LINC00940-201ENST00000418006 PA2G4Q9UQ80 394 aaKnown RBP16.83■□□□□ 0.28
LINC00940-201ENST00000418006 DDX49Q9Y6V7 483 aaKnown RBP16.83■□□□□ 0.28
LINC00940-201ENST00000418006 N4BP2Q86UW6 1770 aaPredicted RBP16.83■□□□□ 0.28
LINC00940-201ENST00000418006 SDSP20132 328 aa16.82■□□□□ 0.28
LINC00940-201ENST00000418006 PDE1AP54750 535 aa16.82■□□□□ 0.28
LINC00940-201ENST00000418006 CLEC17AQ6ZS10 378 aa16.82■□□□□ 0.28
LINC00940-201ENST00000418006 TTLL7Q6ZT98 887 aa16.82■□□□□ 0.28
LINC00940-201ENST00000418006 BICC1Q9H694 974 aaKnown RBP16.82■□□□□ 0.28
LINC00940-201ENST00000418006 CDC45O75419 566 aa16.82■□□□□ 0.28
LINC00940-201ENST00000418006 POLA2Q14181 598 aa16.82■□□□□ 0.28
LINC00940-201ENST00000418006 PRDM4Q9UKN5 801 aa16.82■□□□□ 0.28
LINC00940-201ENST00000418006 R3HCC1Q9Y3T6 440 aaKnown RBP16.81■□□□□ 0.28
LINC00940-201ENST00000418006 BAG4O95429 457 aaKnown RBP16.81■□□□□ 0.28
LINC00940-201ENST00000418006 MX1P20591 662 aa16.81■□□□□ 0.28
LINC00940-201ENST00000418006 GCKRQ14397 625 aa16.81■□□□□ 0.28
LINC00940-201ENST00000418006 ZBTB3Q9H5J0 574 aa16.81■□□□□ 0.28
LINC00940-201ENST00000418006 FAM13BQ9NYF5 915 aa16.8■□□□□ 0.28
LINC00940-201ENST00000418006 RHPN1Q8TCX5 695 aa16.8■□□□□ 0.28
LINC00940-201ENST00000418006 KAZALD1Q96I82 304 aa16.8■□□□□ 0.28
LINC00940-201ENST00000418006 MAP7D2Q96T17 732 aa16.8■□□□□ 0.28
LINC00940-201ENST00000418006 ATG3Q9NT62 314 aa16.8■□□□□ 0.28
LINC00940-201ENST00000418006 AK9Q5TCS8 1911 aa16.8■□□□□ 0.28
LINC00940-201ENST00000418006 TRIM6-TRIM34B2RNG4 842 aa16.79■□□□□ 0.28
LINC00940-201ENST00000418006 HS1BP3Q53T59 392 aa16.79■□□□□ 0.28
LINC00940-201ENST00000418006 UBE3BQ7Z3V4 1068 aa16.79■□□□□ 0.28
LINC00940-201ENST00000418006 DNAJC10Q8IXB1 793 aa16.79■□□□□ 0.28
LINC00940-201ENST00000418006 ACSBG1Q96GR2 724 aa16.79■□□□□ 0.28
LINC00940-201ENST00000418006 SIL1Q9H173 461 aa16.79■□□□□ 0.28
LINC00940-201ENST00000418006 COL22A1Q8NFW1 1626 aaPredicted RBP16.79■□□□□ 0.28
LINC00940-201ENST00000418006 TOGARAM1Q9Y4F4 1720 aa16.79■□□□□ 0.28
LINC00940-201ENST00000418006 PRIM1P49642 420 aaKnown RBP16.79■□□□□ 0.28
LINC00940-201ENST00000418006 ZNF445P59923 1031 aa16.79■□□□□ 0.28
LINC00940-201ENST00000418006 RILPL2Q969X0 211 aa16.79■□□□□ 0.28
LINC00940-201ENST00000418006 KCPQ6ZWJ8 1503 aa16.79■□□□□ 0.28
LINC00940-201ENST00000418006 MAP4K4O95819 1239 aaPredicted RBP16.78■□□□□ 0.28
LINC00940-201ENST00000418006 DDB1Q16531 1140 aa16.78■□□□□ 0.28
LINC00940-201ENST00000418006 PLBD2Q8NHP8 589 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms